PubRank

Douwe Molenaar

Author PubWeight™ 74.13‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 Complete genome sequence of Lactobacillus plantarum WCFS1. Proc Natl Acad Sci U S A 2003 8.40
2 Development and application of the human intestinal tract chip, a phylogenetic microarray: analysis of universally conserved phylotypes in the abundant microbiota of young and elderly adults. Environ Microbiol 2009 3.57
3 Visualization for genomics: the Microbial Genome Viewer. Bioinformatics 2004 3.52
4 Phenotypic and genomic diversity of Lactobacillus plantarum strains isolated from various environmental niches. Environ Microbiol 2009 2.18
5 Analysis of growth of Lactobacillus plantarum WCFS1 on a complex medium using a genome-scale metabolic model. J Biol Chem 2006 2.17
6 The micro-Petri dish, a million-well growth chip for the culture and high-throughput screening of microorganisms. Proc Natl Acad Sci U S A 2007 1.94
7 Complete genome sequence of Lactococcus lactis subsp. lactis KF147, a plant-associated lactic acid bacterium. J Bacteriol 2010 1.90
8 Biodiversity-based identification and functional characterization of the mannose-specific adhesin of Lactobacillus plantarum. J Bacteriol 2005 1.85
9 Glutathione protects Lactococcus lactis against oxidative stress. Appl Environ Microbiol 2003 1.68
10 Lactobacillus plantarum gene clusters encoding putative cell-surface protein complexes for carbohydrate utilization are conserved in specific gram-positive bacteria. BMC Genomics 2006 1.65
11 An agr-like two-component regulatory system in Lactobacillus plantarum is involved in production of a novel cyclic peptide and regulation of adherence. J Bacteriol 2005 1.61
12 Genome-scale genotype-phenotype matching of two Lactococcus lactis isolates from plants identifies mechanisms of adaptation to the plant niche. Appl Environ Microbiol 2007 1.55
13 Natural diversity and adaptive responses of Lactococcus lactis. Curr Opin Biotechnol 2006 1.54
14 Identification of Lactobacillus plantarum genes modulating the cytokine response of human peripheral blood mononuclear cells. BMC Microbiol 2010 1.51
15 Identification of prebiotic fructooligosaccharide metabolism in Lactobacillus plantarum WCFS1 through microarrays. Appl Environ Microbiol 2007 1.48
16 Microbial domestication signatures of Lactococcus lactis can be reproduced by experimental evolution. Genome Res 2011 1.41
17 Convergence in probiotic Lactobacillus gut-adaptive responses in humans and mice. ISME J 2010 1.33
18 Exploring metabolic pathway reconstruction and genome-wide expression profiling in Lactobacillus reuteri to define functional probiotic features. PLoS One 2011 1.25
19 Genome-scale diversity and niche adaptation analysis of Lactococcus lactis by comparative genome hybridization using multi-strain arrays. Microb Biotechnol 2011 1.19
20 Thioredoxin reductase is a key factor in the oxidative stress response of Lactobacillus plantarum WCFS1. Microb Cell Fact 2007 1.17
21 Lifestyle of Lactobacillus plantarum in the mouse caecum. Environ Microbiol 2009 1.15
22 PanCGH: a genotype-calling algorithm for pangenome CGH data. Bioinformatics 2009 1.10
23 Mixed-culture transcriptome analysis reveals the molecular basis of mixed-culture growth in Streptococcus thermophilus and Lactobacillus bulgaricus. Appl Environ Microbiol 2010 1.03
24 sigma54-Mediated control of the mannose phosphotransferase sytem in Lactobacillus plantarum impacts on carbohydrate metabolism. Microbiology 2009 1.02
25 PhenoLink--a web-tool for linking phenotype to ~omics data for bacteria: application to gene-trait matching for Lactobacillus plantarum strains. BMC Genomics 2012 1.02
26 Identification of the sigmaB regulon of Bacillus cereus and conservation of sigmaB-regulated genes in low-GC-content gram-positive bacteria. J Bacteriol 2007 1.00
27 Availability of public goods shapes the evolution of competing metabolic strategies. Proc Natl Acad Sci U S A 2013 0.99
28 Trehalose degradation and glucose efflux precede cell ejection during germination of heat-resistant ascospores of Talaromyces macrosporus. Arch Microbiol 2002 0.99
29 AmtB-mediated NH3 transport in prokaryotes must be active and as a consequence regulation of transport by GlnK is mandatory to limit futile cycling of NH4(+)/NH3. FEBS Lett 2010 0.98
30 Regulatory phenotyping reveals important diversity within the species Lactococcus lactis. Appl Environ Microbiol 2009 0.97
31 Improvement of Lactobacillus plantarum aerobic growth as directed by comprehensive transcriptome analysis. Appl Environ Microbiol 2008 0.96
32 Bioinformatics and systems biology: bridging the gap between heterogeneous student backgrounds. Brief Bioinform 2013 0.96
33 The SOS response of Listeria monocytogenes is involved in stress resistance and mutagenesis. Microbiology 2009 0.95
34 Standardized assay medium to measure Lactococcus lactis enzyme activities while mimicking intracellular conditions. Appl Environ Microbiol 2011 0.95
35 Volatile compound fingerprinting of mixed-culture fermentations. Appl Environ Microbiol 2011 0.94
36 Effect of amino acid availability on vitamin B12 production in Lactobacillus reuteri. Appl Environ Microbiol 2009 0.92
37 Systems biology of lactic acid bacteria: a critical review. Microb Cell Fact 2011 0.91
38 Using Lactococcus lactis for glutathione overproduction. Appl Microbiol Biotechnol 2004 0.89
39 Genome instability in Lactobacillus rhamnosus GG. Appl Environ Microbiol 2013 0.89
40 High local substrate availability stabilizes a cooperative trait. ISME J 2010 0.88
41 Two homologous Agr-like quorum-sensing systems cooperatively control adherence, cell morphology, and cell viability properties in Lactobacillus plantarum WCFS1. J Bacteriol 2008 0.87
42 Physiological responses to folate overproduction in Lactobacillus plantarum WCFS1. Microb Cell Fact 2010 0.87
43 Functional identification in Lactobacillus reuteri of a PocR-like transcription factor regulating glycerol utilization and vitamin B12 synthesis. Microb Cell Fact 2011 0.86
44 Expression of plant flavor genes in Lactococcus lactis. Appl Environ Microbiol 2007 0.86
45 Unity in organisation and regulation of catabolic operons in Lactobacillus plantarum, Lactococcus lactis and Listeria monocytogenes. Syst Appl Microbiol 2005 0.86
46 Functional ingredient production: application of global metabolic models. Curr Opin Biotechnol 2005 0.86
47 Introducing glutathione biosynthetic capability into Lactococcus lactis subsp. cremoris NZ9000 improves the oxidative-stress resistance of the host. Metab Eng 2006 0.83
48 Metabolic shifts: a fitness perspective for microbial cell factories. Biotechnol Lett 2012 0.83
49 Involvement of the mannose phosphotransferase system of Lactobacillus plantarum WCFS1 in peroxide stress tolerance. Appl Environ Microbiol 2010 0.83
50 Gene expression analysis reveals a gene set discriminatory to different metals in soil. Toxicol Sci 2010 0.82
51 How biochemical constraints of cellular growth shape evolutionary adaptations in metabolism. Genetics 2013 0.82
52 Functional analysis of the role of CggR (central glycolytic gene regulator) in Lactobacillus plantarum by transcriptome analysis. Microb Biotechnol 2010 0.79
53 Large intergenic cruciform-like supermotifs in the Lactobacillus plantarum genome. J Bacteriol 2009 0.78
54 Dichotomy in post-genomic microbiology. Nat Biotechnol 2007 0.78
55 The pivotal regulator GlnB of Escherichia coli is engaged in subtle and context-dependent control. FEBS J 2009 0.78
56 Vesicle trafficking via the Spitzenkörper during hyphal tip growth in Rhizoctonia solani. Antonie Van Leeuwenhoek 2013 0.77