Published in Theor Biol Med Model on December 16, 2011
Simulating cancer growth with multiscale agent-based modeling. Semin Cancer Biol (2014) 1.09
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The effects of EGF-receptor density on multiscale tumor growth patterns. J Theor Biol (2005) 1.25
Simulating the impact of a molecular 'decision-process' on cellular phenotype and multicellular patterns in brain tumors. J Theor Biol (2004) 1.25
A mathematical model of combination therapy using the EGFR signaling network. Biosystems (2005) 1.23
Glioblastoma multiforme: clinical findings, magnetic resonance imaging, and pathology in five dogs. Vet Pathol (2003) 1.20
Emerging patterns in tumor systems: simulating the dynamics of multicellular clusters with an agent-based spatial agglomeration model. J Theor Biol (2002) 1.18
Replication-competent retrovirus vectors for cancer gene therapy. Front Biosci (2008) 1.06
Genetic modulation of hypoxia induced gene expression and angiogenesis: relevance to brain tumors. Front Biosci (2003) 1.04
The impact of "search precision" in an agent-based tumor model. J Theor Biol (2003) 1.04
Simulating Brain Tumor Heterogeneity with a Multiscale Agent-Based Model: Linking Molecular Signatures, Phenotypes and Expansion Rate. Math Comput Model (2009) 1.04
Description and characterization of a chamber for viewing and quantifying cancer cell chemotaxis. Cell Motil Cytoskeleton (2005) 1.03
Glioblastoma multiforme: a rare manifestation of extensive liver and bone metastases. Biomed Imaging Interv J (2008) 0.87
Multi-scale, multi-resolution brain cancer modeling. Math Comput Simul (2009) 0.84
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Burden and aetiology of diarrhoeal disease in infants and young children in developing countries (the Global Enteric Multicenter Study, GEMS): a prospective, case-control study. Lancet (2013) 14.06
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Automated segmentation, classification, and tracking of cancer cell nuclei in time-lapse microscopy. IEEE Trans Biomed Eng (2006) 3.45
A field trial to assess a blood-stage malaria vaccine. N Engl J Med (2011) 3.20
Quantitative description of proton exchange processes between water and endogenous and exogenous agents for WEX, CEST, and APT experiments. Magn Reson Med (2004) 2.80
Novel cell segmentation and online SVM for cell cycle phase identification in automated microscopy. Bioinformatics (2007) 2.54
Faslodex inhibits estradiol-induced extracellular matrix dynamics and lung metastasis in a model of lymphangioleiomyomatosis. Am J Respir Cell Mol Biol (2013) 2.06
Accurate single cell 24 chromosome aneuploidy screening using whole genome amplification and single nucleotide polymorphism microarrays. Fertil Steril (2010) 1.93
Automated neurite extraction using dynamic programming for high-throughput screening of neuron-based assays. Neuroimage (2007) 1.92
Transcriptional profiling reveals developmental relationship and distinct biological functions of CD16+ and CD16- monocyte subsets. BMC Genomics (2009) 1.86
Development and validation of an accurate quantitative real-time polymerase chain reaction-based assay for human blastocyst comprehensive chromosomal aneuploidy screening. Fertil Steril (2012) 1.73
Human papillomavirus type 16 E7 oncoprotein associates with the cullin 2 ubiquitin ligase complex, which contributes to degradation of the retinoblastoma tumor suppressor. J Virol (2007) 1.73
Amide proton transfer imaging of 9L gliosarcoma and human glioblastoma xenografts. NMR Biomed (2008) 1.70
Using manifold embedding for assessing and predicting protein interactions from high-throughput experimental data. Bioinformatics (2010) 1.65
Comprehensive chromosome screening is highly predictive of the reproductive potential of human embryos: a prospective, blinded, nonselection study. Fertil Steril (2012) 1.62
Statistical methods in the Global Enteric Multicenter Study (GEMS). Clin Infect Dis (2012) 1.59
A novel computational approach for automatic dendrite spines detection in two-photon laser scan microscopy. J Neurosci Methods (2007) 1.53
Automated neurite labeling and analysis in fluorescence microscopy images. Cytometry A (2006) 1.53
SNP microarray-based 24 chromosome aneuploidy screening is significantly more consistent than FISH. Mol Hum Reprod (2010) 1.52
Hybrid male sterility in rice controlled by interaction between divergent alleles of two adjacent genes. Proc Natl Acad Sci U S A (2008) 1.52
Single nucleotide polymorphism microarray-based concurrent screening of 24-chromosome aneuploidy and unbalanced translocations in preimplantation human embryos. Fertil Steril (2010) 1.49
Prevalence and trend of hepatitis C virus infection among blood donors in Chinese mainland: a systematic review and meta-analysis. BMC Infect Dis (2011) 1.48
Multiple nuclei tracking using integer programming for quantitative cancer cell cycle analysis. IEEE Trans Med Imaging (2009) 1.47
Cellular phenotype recognition for high-content RNA interference genome-wide screening. J Biomol Screen (2008) 1.47
Large-scale discovery of promoter motifs in Drosophila melanogaster. PLoS Comput Biol (2006) 1.46
Multipotential differentiation of human urine-derived stem cells: potential for therapeutic applications in urology. Stem Cells (2013) 1.46
Reprogramming of human somatic cells using human and animal oocytes. Cloning Stem Cells (2009) 1.40
Context based mixture model for cell phase identification in automated fluorescence microscopy. BMC Bioinformatics (2007) 1.40
Oxidative stress induces parallel autophagy and mitochondria dysfunction in human glioma U251 cells. Toxicol Sci (2009) 1.38
Probing protein-carbohydrate interactions with microarrays of synthetic oligosaccharides. Chembiochem (2004) 1.38
Semi-supervised drug-protein interaction prediction from heterogeneous biological spaces. BMC Syst Biol (2010) 1.36
Pharmacokinetics and pharmacodynamics of once-daily versus twice-daily raltegravir in treatment-naive HIV-infected patients. Antimicrob Agents Chemother (2012) 1.36
A novel tracing algorithm for high throughput imaging Screening of neuron-based assays. J Neurosci Methods (2006) 1.35
Accuracy of a computer-aided surgical simulation protocol for orthognathic surgery: a prospective multicenter study. J Oral Maxillofac Surg (2012) 1.34
Health care seeking for childhood diarrhea in developing countries: evidence from seven sites in Africa and Asia. Am J Trop Med Hyg (2013) 1.34
Using iterative cluster merging with improved gap statistics to perform online phenotype discovery in the context of high-throughput RNAi screens. BMC Bioinformatics (2008) 1.33
The phylogenetic analysis of tetraspanins projects the evolution of cell-cell interactions from unicellular to multicellular organisms. Genomics (2005) 1.33
Single-cell whole-genome amplification technique impacts the accuracy of SNP microarray-based genotyping and copy number analyses. Mol Hum Reprod (2010) 1.31
Inhibition of autophagy enhances cisplatin cytotoxicity through endoplasmic reticulum stress in human cervical cancer cells. Cancer Lett (2011) 1.31
The knowledge-integrated network biomarkers discovery for major adverse cardiac events. J Proteome Res (2008) 1.27
Receptor protein tyrosine phosphatase alpha is essential for hippocampal neuronal migration and long-term potentiation. EMBO J (2003) 1.25
p62/SQSTM1 involved in cisplatin resistance in human ovarian cancer cells by clearing ubiquitinated proteins. Eur J Cancer (2011) 1.25
Genomic and bioinformatics analysis of HAdV-4, a human adenovirus causing acute respiratory disease: implications for gene therapy and vaccine vector development. J Virol (2005) 1.24
Dendritic spine detection using curvilinear structure detector and LDA classifier. Neuroimage (2007) 1.23
A semi-supervised learning approach to predict synthetic genetic interactions by combining functional and topological properties of functional gene network. BMC Bioinformatics (2010) 1.21
Overexpression of EB1 in human esophageal squamous cell carcinoma (ESCC) may promote cellular growth by activating beta-catenin/TCF pathway. Oncogene (2005) 1.18
Multiclass cancer classification by using fuzzy support vector machine and binary decision tree with gene selection. J Biomed Biotechnol (2005) 1.16
Robust embryo identification using first polar body single nucleotide polymorphism microarray-based DNA fingerprinting. Fertil Steril (2009) 1.15
Patterning multiple aligned self-assembled monolayers using light. Langmuir (2004) 1.14
Computer-assisted lip diagnosis on Traditional Chinese Medicine using multi-class support vector machines. BMC Complement Altern Med (2012) 1.14
Hydrogels cross-linked by native chemical ligation. Biomacromolecules (2009) 1.13
A general MRI-CEST ratiometric approach for pH imaging: demonstration of in vivo pH mapping with iobitridol. J Am Chem Soc (2014) 1.12
Automatic dendritic spine analysis in two-photon laser scanning microscopy images. Cytometry A (2007) 1.12
Tracking molecular particles in live cells using fuzzy rule-based system. Cytometry A (2007) 1.11
Profiling kinase activities by using a peptide chip and mass spectrometry. Angew Chem Int Ed Engl (2004) 1.10
LAPTM4B-35 is a novel prognostic factor of hepatocellular carcinoma. J Surg Oncol (2010) 1.10
A novel single-cell DNA fingerprinting method successfully distinguishes sibling human embryos. Fertil Steril (2009) 1.09
Discovery of wall teichoic acid inhibitors as potential anti-MRSA β-lactam combination agents. Chem Biol (2013) 1.07
MRI of insulitis in autoimmune diabetes. Magn Reson Med (2002) 1.05
A novel missense-mutation-related feature extraction scheme for 'driver' mutation identification. Bioinformatics (2012) 1.04
NSMAP: a method for spliced isoforms identification and quantification from RNA-Seq. BMC Bioinformatics (2011) 1.04
Overexpression of human pituitary tumor transforming gene (hPTTG), is regulated by beta-catenin /TCF pathway in human esophageal squamous cell carcinoma. Int J Cancer (2005) 1.04
Telomere DNA deficiency is associated with development of human embryonic aneuploidy. PLoS Genet (2011) 1.03
Drug inhibition profile prediction for NFκB pathway in multiple myeloma. PLoS One (2011) 1.01
An enhanced Petri-net model to predict synergistic effects of pairwise drug combinations from gene microarray data. Bioinformatics (2011) 1.01
High content image analysis for human H4 neuroglioma cells exposed to CuO nanoparticles. BMC Biotechnol (2007) 1.00
Whole-Teflon microfluidic chips. Proc Natl Acad Sci U S A (2011) 1.00
Health care-seeking behavior for childhood diarrhea in Mirzapur, rural Bangladesh. Am J Trop Med Hyg (2013) 1.00
Skeletal myogenic differentiation of urine-derived stem cells and angiogenesis using microbeads loaded with growth factors. Biomaterials (2012) 1.00
Improved measurement of labile proton concentration-weighted chemical exchange rate (k(ws)) with experimental factor-compensated and T(1) -normalized quantitative chemical exchange saturation transfer (CEST) MRI. Contrast Media Mol Imaging (2012) 1.00
Self-renewal and differentiation capacity of urine-derived stem cells after urine preservation for 24 hours. PLoS One (2013) 0.99
Boosting alternating decision trees modeling of disease trait information. BMC Genet (2005) 0.99
Discovery and SAR of a novel selective and orally bioavailable nonpeptide classical competitive inhibitor class of protein-tyrosine phosphatase 1B. J Med Chem (2002) 0.99
Cancer stem cell, niche and EGFR decide tumor development and treatment response: A bio-computational simulation study. J Theor Biol (2010) 0.98
Compound signature detection on LINCS L1000 big data. Mol Biosyst (2015) 0.97
Surface functionalization of gold nanoparticles with red blood cell membranes. Adv Mater (2013) 0.97
Integrative analysis of next generation sequencing for small non-coding RNAs and transcriptional regulation in Myelodysplastic Syndromes. BMC Med Genomics (2011) 0.97
Genes "waiting" for recruitment by the adaptive immune system: the insights from amphioxus. J Immunol (2005) 0.97
The use of temperature-composition combinatorial libraries to study the effects of biodegradable polymer blend surfaces on vascular cells. Biomaterials (2004) 0.97
High-throughput carrier screening using TaqMan allelic discrimination. PLoS One (2013) 0.97
An automated method for cell detection in zebrafish. Neuroinformatics (2008) 0.97
Sediment removal by prairie filter strips in row-cropped ephemeral watersheds. J Environ Qual (2012) 0.96
Quantification of tumor microvascularity with respiratory gated contrast enhanced ultrasound for monitoring therapy. Ultrasound Med Biol (2010) 0.96
Genomic profiling of plasmablastic lymphoma using array comparative genomic hybridization (aCGH): revealing significant overlapping genomic lesions with diffuse large B-cell lymphoma. J Hematol Oncol (2009) 0.95
Complete genome sequence of goose tembusu virus, isolated from jiangnan white geese in jiangsu, china. Genome Announc (2013) 0.95
Doxorubicin-loaded glycyrrhetinic acid-modified alginate nanoparticles for liver tumor chemotherapy. Biomaterials (2011) 0.95
Cytokine combination therapy prediction for bone remodeling in tissue engineering based on the intracellular signaling pathway. Biomaterials (2012) 0.95
Housefly population density correlates with shigellosis among children in Mirzapur, Bangladesh: a time series analysis. PLoS Negl Trop Dis (2013) 0.95
The naturally occurring YMDD mutation among patients chronically infected HBV and untreated with lamivudine: a systematic review and meta-analysis. PLoS One (2012) 0.94
Predicting enzyme targets for cancer drugs by profiling human metabolic reactions in NCI-60 cell lines. BMC Bioinformatics (2010) 0.94
Automated axon tracking of 3D confocal laser scanning microscopy images using guided probabilistic region merging. Neuroinformatics (2007) 0.93
Biscarbamate cross-linked low molecular weight PEI for delivering IL-1 receptor antagonist gene to synoviocytes for arthritis therapy. Biomaterials (2012) 0.93
Correlation of LAPTM4B polymorphisms with gallbladder carcinoma susceptibility in Chinese patients. Med Oncol (2012) 0.93
Using genetic and clinical factors to predict tacrolimus dose in renal transplant recipients. Pharmacogenomics (2010) 0.93
An automatic and robust algorithm of reestablishment of digital dental occlusion. IEEE Trans Med Imaging (2010) 0.93
Detection and characterization of regulatory elements using probabilistic conditional random field and hidden Markov models. Chin J Cancer (2012) 0.92
Characterization of the expression of Salmonella Type III secretion system factor PrgI, SipA, SipB, SopE2, SpaO, and SptP in cultures and in mice. BMC Microbiol (2009) 0.92