Published in J Mol Biol on December 22, 2011
Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes. Biotechnol Biofuels (2013) 3.30
Novel enzymes for the degradation of cellulose. Biotechnol Biofuels (2012) 2.85
NMR structure of a lytic polysaccharide monooxygenase provides insight into copper binding, protein dynamics, and substrate interactions. Proc Natl Acad Sci U S A (2012) 1.46
Crystal structure and computational characterization of the lytic polysaccharide monooxygenase GH61D from the Basidiomycota fungus Phanerochaete chrysosporium. J Biol Chem (2013) 1.34
The copper active site of CBM33 polysaccharide oxygenases. J Am Chem Soc (2013) 1.23
Structural and functional characterization of a conserved pair of bacterial cellulose-oxidizing lytic polysaccharide monooxygenases. Proc Natl Acad Sci U S A (2014) 1.14
Classification of fungal and bacterial lytic polysaccharide monooxygenases. BMC Genomics (2015) 0.95
Structural and electronic snapshots during the transition from a Cu(II) to Cu(I) metal center of a lytic polysaccharide monooxygenase by X-ray photoreduction. J Biol Chem (2014) 0.95
Fungal cellulose degradation by oxidative enzymes: from dysfunctional GH61 family to powerful lytic polysaccharide monooxygenase family. Brief Funct Genomics (2014) 0.93
Cooperative degradation of chitin by extracellular and cell surface-expressed chitinases from Paenibacillus sp. strain FPU-7. Appl Environ Microbiol (2013) 0.91
Chitin binding proteins act synergistically with chitinases in Serratia proteamaculans 568. PLoS One (2012) 0.89
A structural overview of GH61 proteins - fungal cellulose degrading polysaccharide monooxygenases. Comput Struct Biotechnol J (2012) 0.84
The Intraperitoneal Transcriptome of the Opportunistic Pathogen Enterococcus faecalis in Mice. PLoS One (2015) 0.84
Paenibacillus larvae chitin-degrading protein PlCBP49 is a key virulence factor in American Foulbrood of honey bees. PLoS Pathog (2014) 0.81
Evolution of substrate specificity in bacterial AA10 lytic polysaccharide monooxygenases. Biotechnol Biofuels (2014) 0.81
Characterization of a Chitin-Binding Protein from Bacillus thuringiensis HD-1. PLoS One (2013) 0.80
Heterogeneity in the Histidine-brace Copper Coordination Sphere in Auxiliary Activity Family 10 (AA10) Lytic Polysaccharide Monooxygenases. J Biol Chem (2016) 0.78
Cellulose degradation by oxidative enzymes. Comput Struct Biotechnol J (2012) 0.78
Chitinase expression in Listeria monocytogenes is positively regulated by the Agr system. PLoS One (2014) 0.77
Fungal chitinases: function, regulation, and potential roles in plant/pathogen interactions. Curr Genet (2015) 0.76
Lytic polysaccharide monooxygenases: a crystallographer's view on a new class of biomass-degrading enzymes. IUCrJ (2016) 0.75
Targeting the reactive intermediate in polysaccharide monooxygenases. J Biol Inorg Chem (2017) 0.75
Expression of chitinases in Listeria monocytogenes is influenced by lmo0327 that encodes an internalin-like protein. Appl Environ Microbiol (2017) 0.75
Improving extracellular production of Serratia marcescens lytic polysaccharide monooxygenase CBP21 and Aeromonas veronii B565 chitinase Chi92 in Escherichia coli and their synergism. AMB Express (2017) 0.75
Human and bacterial oxidative demethylases repair alkylation damage in both RNA and DNA. Nature (2003) 5.49
An oxidative enzyme boosting the enzymatic conversion of recalcitrant polysaccharides. Science (2010) 3.43
Cleavage of cellulose by a CBM33 protein. Protein Sci (2011) 2.38
Human ABH3 structure and key residues for oxidative demethylation to reverse DNA/RNA damage. EMBO J (2006) 2.27
The non-catalytic chitin-binding protein CBP21 from Serratia marcescens is essential for chitin degradation. J Biol Chem (2005) 2.18
Autophagy contributes to therapy-induced degradation of the PML/RARA oncoprotein. Blood (2010) 2.15
The putative endoglucanase PcGH61D from Phanerochaete chrysosporium is a metal-dependent oxidative enzyme that cleaves cellulose. PLoS One (2011) 2.12
Human DNA glycosylases of the bacterial Fpg/MutM superfamily: an alternative pathway for the repair of 8-oxoguanine and other oxidation products in DNA. Nucleic Acids Res (2002) 1.96
Base excision repair. Cold Spring Harb Perspect Biol (2013) 1.91
Crystal structure and binding properties of the Serratia marcescens chitin-binding protein CBP21. J Biol Chem (2004) 1.76
Rational engineering of enzyme stability. J Biotechnol (2004) 1.70
Production of chitooligosaccharides and their potential applications in medicine. Mar Drugs (2010) 1.69
High-level, inducible gene expression in Lactobacillus sakei and Lactobacillus plantarum using versatile expression vectors. Microbiology (2005) 1.63
New functions of XPC in the protection of human skin cells from oxidative damage. EMBO J (2006) 1.60
Directed evolution of enzyme stability. Biomol Eng (2005) 1.56
Substrate specificities of bacterial and human AlkB proteins. Nucleic Acids Res (2004) 1.54
Metagenomics of the Svalbard reindeer rumen microbiome reveals abundance of polysaccharide utilization loci. PLoS One (2012) 1.51
Discovery of LPMO activity on hemicelluloses shows the importance of oxidative processes in plant cell wall degradation. Proc Natl Acad Sci U S A (2014) 1.46
NMR structure of a lytic polysaccharide monooxygenase provides insight into copper binding, protein dynamics, and substrate interactions. Proc Natl Acad Sci U S A (2012) 1.46
A C4-oxidizing lytic polysaccharide monooxygenase cleaving both cellulose and cello-oligosaccharides. J Biol Chem (2013) 1.39
Pediocin-like antimicrobial peptides (class IIa bacteriocins) and their immunity proteins: biosynthesis, structure, and mode of action. J Pept Sci (2005) 1.38
Mutational and computational analysis of the role of conserved residues in the active site of a family 18 chitinase. Eur J Biochem (2004) 1.37
Crystal structure and computational characterization of the lytic polysaccharide monooxygenase GH61D from the Basidiomycota fungus Phanerochaete chrysosporium. J Biol Chem (2013) 1.34
Mutational analysis of the role of tryptophan residues in an antimicrobial peptide. Biochemistry (2002) 1.30
Incision at hypoxanthine residues in DNA by a mammalian homologue of the Escherichia coli antimutator enzyme endonuclease V. Nucleic Acids Res (2003) 1.29
Costs and benefits of processivity in enzymatic degradation of recalcitrant polysaccharides. Proc Natl Acad Sci U S A (2006) 1.28
WRN interacts physically and functionally with the recombination mediator protein RAD52. J Biol Chem (2003) 1.27
Structures of endonuclease V with DNA reveal initiation of deaminated adenine repair. Nat Struct Mol Biol (2009) 1.26
Construction of vectors for inducible gene expression in Lactobacillus sakei and L plantarum. FEMS Microbiol Lett (2003) 1.22
The chitinolytic machinery of Serratia marcescens--a model system for enzymatic degradation of recalcitrant polysaccharides. FEBS J (2013) 1.20
High-resolution structures of a chitinase complexed with natural product cyclopentapeptide inhibitors: mimicry of carbohydrate substrate. Proc Natl Acad Sci U S A (2002) 1.20
Endo/exo mechanism and processivity of family 18 chitinases produced by Serratia marcescens. FEBS J (2006) 1.19
Structure-based mutagenesis reveals the albumin-binding site of the neonatal Fc receptor. Nat Commun (2012) 1.19
The Vibrio cholerae colonization factor GbpA possesses a modular structure that governs binding to different host surfaces. PLoS Pathog (2012) 1.14
DNA base repair--recognition and initiation of catalysis. FEMS Microbiol Rev (2009) 1.14
Comparative study of two chitin-active and two cellulose-active AA10-type lytic polysaccharide monooxygenases. Biochemistry (2014) 1.13
A new protein superfamily includes two novel 3-methyladenine DNA glycosylases from Bacillus cereus, AlkC and AlkD. Mol Microbiol (2006) 1.11
Efficient separation of oxidized cello-oligosaccharides generated by cellulose degrading lytic polysaccharide monooxygenases. J Chromatogr A (2012) 1.10
Human OGG1 undergoes serine phosphorylation and associates with the nuclear matrix and mitotic chromatin in vivo. Nucleic Acids Res (2002) 1.10
Widespread distribution of DNA glycosylases removing oxidative DNA lesions in human and rodent brains. DNA Repair (Amst) (2008) 1.07
Structural insight into repair of alkylated DNA by a new superfamily of DNA glycosylases comprising HEAT-like repeats. Nucleic Acids Res (2007) 1.06
Dissection of the molecular defects caused by pathogenic mutations in the DNA repair factor XPC. Mol Cell Biol (2008) 1.06
Degradation of chitosans with chitinase B from Serratia marcescens. Production of chito-oligosaccharides and insight into enzyme processivity. FEBS J (2005) 1.05
Selection of mutations for increased protein stability. Curr Opin Biotechnol (2002) 1.05
Homodimeric β-galactosidase from Lactobacillus delbrueckii subsp. bulgaricus DSM 20081: expression in Lactobacillus plantarum and biochemical characterization. J Agric Food Chem (2012) 1.04
Endonuclease VIII-like 3 (Neil3) DNA glycosylase promotes neurogenesis induced by hypoxia-ischemia. Proc Natl Acad Sci U S A (2011) 1.04
The outer membrane secretin PilQ from Neisseria meningitidis binds DNA. Microbiology (2007) 1.04
Overexpression and characterization of a novel chitinase from Trichoderma atroviride strain P1. Biochim Biophys Acta (2005) 1.03
Aromatic residues in the catalytic center of chitinase A from Serratia marcescens affect processivity, enzyme activity, and biomass converting efficiency. J Biol Chem (2009) 1.03
Characterization of human cytomegalovirus uracil DNA glycosylase (UL114) and its interaction with polymerase processivity factor (UL44). J Mol Biol (2008) 1.02
Structure-based exploration of cyclic dipeptide chitinase inhibitors. J Med Chem (2004) 1.02
Mitochondrial DNA damage level determines neural stem cell differentiation fate. J Neurosci (2011) 1.02
Plasmid p256 from Lactobacillus plantarum represents a new type of replicon in lactic acid bacteria, and contains a toxin-antitoxin-like plasmid maintenance system. Microbiology (2005) 1.01
Characterization of a new bacteriocin operon in sakacin P-producing Lactobacillus sakei, showing strong translational coupling between the bacteriocin and immunity genes. Appl Environ Microbiol (2005) 1.01
Use of hydrolysates from Atlantic cod (Gadus morhua L.) viscera as a complex nitrogen source for lactic acid bacteria. FEMS Microbiol Lett (2005) 1.01
A general role of the DNA glycosylase Nth1 in the abasic sites cleavage step of base excision repair in Schizosaccharomyces pombe. Nucleic Acids Res (2004) 1.00
Comparative studies of immunity proteins of pediocin-like bacteriocins. Microbiology (2002) 1.00
Expression patterns of Neil3 during embryonic brain development and neoplasia. BMC Neurosci (2009) 0.99
A food-grade system for inducible gene expression in Lactobacillus plantarum using an alanine racemase-encoding selection marker. J Agric Food Chem (2011) 0.99
Hippocampal adult neurogenesis is maintained by Neil3-dependent repair of oxidative DNA lesions in neural progenitor cells. Cell Rep (2012) 0.97
Identification of surface proteins in Enterococcus faecalis V583. BMC Genomics (2011) 0.97
Measuring processivity. Methods Enzymol (2012) 0.97
Serratia marcescens chitinases with tunnel-shaped substrate-binding grooves show endo activity and different degrees of processivity during enzymatic hydrolysis of chitosan. Biochemistry (2006) 0.96
Separation-of-function mutants unravel the dual-reaction mode of human 8-oxoguanine DNA glycosylase. Structure (2011) 0.96
A chemical-genetic screen to unravel the genetic network of CDC28/CDK1 links ubiquitin and Rad6-Bre1 to cell cycle progression. Proc Natl Acad Sci U S A (2011) 0.96
Biochemical characterization and DNA repair pathway interactions of Mag1-mediated base excision repair in Schizosaccharomyces pombe. Nucleic Acids Res (2005) 0.96
Neil1 is a genetic modifier of somatic and germline CAG trinucleotide repeat instability in R6/1 mice. Hum Mol Genet (2012) 0.96
Base excision repair activities required for yeast to attain a full chronological life span. Aging Cell (2003) 0.96
Cdc28 kinase activity regulates the basal transcription machinery at a subset of genes. Proc Natl Acad Sci U S A (2012) 0.95
Dynamic relocalization of hOGG1 during the cell cycle is disrupted in cells harbouring the hOGG1-Cys326 polymorphic variant. Nucleic Acids Res (2005) 0.95
Limited repair of 8-hydroxy-7,8-dihydroguanine residues in human testicular cells. Nucleic Acids Res (2003) 0.95
Cell wall anchoring of the 37-kilodalton oncofetal antigen by Lactobacillus plantarum for mucosal cancer vaccine delivery. Appl Environ Microbiol (2010) 0.95
Transcriptome, proteome, and metabolite analyses of a lactate dehydrogenase-negative mutant of Enterococcus faecalis V583. Appl Environ Microbiol (2011) 0.95
Genetic interactions of DNA repair pathways in the pathogen Neisseria meningitidis. J Bacteriol (2007) 0.94
Human NEIL3 is mainly a monofunctional DNA glycosylase removing spiroimindiohydantoin and guanidinohydantoin. DNA Repair (Amst) (2013) 0.94
Structure of the D142N mutant of the family 18 chitinase ChiB from Serratia marcescens and its complex with allosamidin. Biochim Biophys Acta (2004) 0.93
The Bacillus subtilis counterpart of the mammalian 3-methyladenine DNA glycosylase has hypoxanthine and 1,N6-ethenoadenine as preferred substrates. J Biol Chem (2004) 0.93
Bacteriocins from plant pathogenic bacteria. FEMS Microbiol Lett (2007) 0.93
Crystal structure and enzymatic properties of a bacterial family 19 chitinase reveal differences from plant enzymes. FEBS J (2006) 0.93
Oxygenation of the newborn: a molecular approach. Neonatology (2012) 0.93
Expression of endoglucanases in Pichia pastoris under control of the GAP promoter. Microb Cell Fact (2014) 0.93
Impaired base excision repair and accumulation of oxidative base lesions in CD4+ T cells of HIV-infected patients. Blood (2005) 0.91
High-level expression of recombinant beta-galactosidases in Lactobacillus plantarum and Lactobacillus sakei using a Sakacin P-based expression system. J Agric Food Chem (2008) 0.91
A dominant STIM1 mutation causes Stormorken syndrome. Hum Mutat (2014) 0.90
Synthesis and characterization of half-sandwich N-heterocyclic carbene complexes of cobalt and rhodium. Dalton Trans (2004) 0.90
Expression and purification of NEIL3, a human DNA glycosylase homolog. Protein Expr Purif (2008) 0.90
Human chitotriosidase-catalyzed hydrolysis of chitosan. Biochemistry (2011) 0.89