Published in Arabidopsis Book on November 12, 2009
Comprehensive developmental profiles of gene activity in regions and subregions of the Arabidopsis seed. Proc Natl Acad Sci U S A (2013) 1.87
The phosphorylated pathway of serine biosynthesis is essential both for male gametophyte and embryo development and for root growth in Arabidopsis. Plant Cell (2013) 1.07
Tryptophan-independent auxin biosynthesis contributes to early embryogenesis in Arabidopsis. Proc Natl Acad Sci U S A (2015) 0.94
Functional characterization of the plastidial 3-phosphoglycerate dehydrogenase family in Arabidopsis. Plant Physiol (2013) 0.87
Wuschel-related homeobox 8/9 is important for proper embryo patterning in the gymnosperm Norway spruce. J Exp Bot (2014) 0.82
LEAFY COTYLEDON1, a key regulator of seed development, is expressed in vegetative and sexual propagules of Selaginella moellendorffii. PLoS One (2013) 0.77
Ribonuclease J is required for chloroplast and embryo development in Arabidopsis. J Exp Bot (2015) 0.76
Embryogenesis in Polianthes tuberosa L var. Simple: from megasporogenesis to early embryo development. Springerplus (2016) 0.75
Expression analysis of the Arabidopsis thaliana AtSpen2 gene, and its relationship with other plant genes encoding Spen proteins. Genet Mol Biol (2017) 0.75
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Aux/IAA proteins repress expression of reporter genes containing natural and highly active synthetic auxin response elements. Plant Cell (1997) 11.61
Local, efflux-dependent auxin gradients as a common module for plant organ formation. Cell (2003) 11.53
Control of leaf morphogenesis by microRNAs. Nature (2003) 11.36
Abscisic acid inhibits type 2C protein phosphatases via the PYR/PYL family of START proteins. Science (2009) 10.21
A gene expression map of the Arabidopsis root. Science (2003) 9.95
An "Electronic Fluorescent Pictograph" browser for exploring and analyzing large-scale biological data sets. PLoS One (2007) 9.60
A member of the KNOTTED class of homeodomain proteins encoded by the STM gene of Arabidopsis. Nature (1996) 9.53
The F-box protein TIR1 is an auxin receptor. Nature (2005) 9.45
Regulation of phyllotaxis by polar auxin transport. Nature (2003) 9.17
Efflux-dependent auxin gradients establish the apical-basal axis of Arabidopsis. Nature (2003) 8.75
The Arabidopsis F-box protein TIR1 is an auxin receptor. Nature (2005) 8.70
Role of WUSCHEL in regulating stem cell fate in the Arabidopsis shoot meristem. Cell (1998) 8.33
The CLAVATA1 gene encodes a putative receptor kinase that controls shoot and floral meristem size in Arabidopsis. Cell (1997) 8.31
The PIN auxin efflux facilitator network controls growth and patterning in Arabidopsis roots. Nature (2005) 8.20
Regulation of polar auxin transport by AtPIN1 in Arabidopsis vascular tissue. Science (1998) 7.95
The stem cell population of Arabidopsis shoot meristems in maintained by a regulatory loop between the CLAVATA and WUSCHEL genes. Cell (2000) 7.89
The Arabidopsis GNOM ARF-GEF mediates endosomal recycling, auxin transport, and auxin-dependent plant growth. Cell (2003) 6.95
Radial patterning of Arabidopsis shoots by class III HD-ZIP and KANADI genes. Curr Biol (2003) 6.67
A role for flavin monooxygenase-like enzymes in auxin biosynthesis. Science (2001) 6.39
Patterns of auxin transport and gene expression during primordium development revealed by live imaging of the Arabidopsis inflorescence meristem. Curr Biol (2005) 6.35
Role of PHABULOSA and PHAVOLUTA in determining radial patterning in shoots. Nature (2001) 6.12
The WUSCHEL gene is required for shoot and floral meristem integrity in Arabidopsis. Development (1996) 6.11
The Botany Array Resource: e-Northerns, Expression Angling, and promoter analyses. Plant J (2005) 6.07
The Arabidopsis gene MONOPTEROS encodes a transcription factor mediating embryo axis formation and vascular development. EMBO J (1998) 6.03
Auxin regulates the initiation and radial position of plant lateral organs. Plant Cell (2000) 5.96
Auxin transport promotes Arabidopsis lateral root initiation. Plant Cell (2001) 5.82
PIN proteins perform a rate-limiting function in cellular auxin efflux. Science (2006) 5.58
The SHORT-ROOT gene controls radial patterning of the Arabidopsis root through radial signaling. Cell (2000) 5.38
Genes involved in organ separation in Arabidopsis: an analysis of the cup-shaped cotyledon mutant. Plant Cell (1997) 5.21
Intercellular movement of the putative transcription factor SHR in root patterning. Nature (2001) 5.01
Polar PIN localization directs auxin flow in plants. Science (2006) 4.81
Control of leaf vascular patterning by polar auxin transport. Genes Dev (2006) 4.77
A PINOID-dependent binary switch in apical-basal PIN polar targeting directs auxin efflux. Science (2004) 4.77
Identification of CRE1 as a cytokinin receptor from Arabidopsis. Nature (2001) 4.77
The PLETHORA genes mediate patterning of the Arabidopsis root stem cell niche. Cell (2004) 4.52
Cell identity mediates the response of Arabidopsis roots to abiotic stress. Science (2008) 4.40
Leaf polarity and meristem formation in Arabidopsis. Development (1998) 4.33
Auxin in action: signalling, transport and the control of plant growth and development. Nat Rev Mol Cell Biol (2006) 4.28
Cytokinesis in the Arabidopsis embryo involves the syntaxin-related KNOLLE gene product. Cell (1996) 4.20
Asymmetric leaves1 mediates leaf patterning and stem cell function in Arabidopsis. Nature (2001) 4.17
The Arabidopsis CLAVATA2 gene encodes a receptor-like protein required for the stability of the CLAVATA1 receptor-like kinase. Plant Cell (1999) 4.08
Role of the ZWILLE gene in the regulation of central shoot meristem cell fate during Arabidopsis embryogenesis. EMBO J (1998) 4.04
Cell fate in the Arabidopsis root meristem determined by directional signalling. Nature (1995) 4.03
The PINHEAD/ZWILLE gene acts pleiotropically in Arabidopsis development and has overlapping functions with the ARGONAUTE1 gene. Development (1999) 3.98
Auxin Polar Transport Is Essential for the Establishment of Bilateral Symmetry during Early Plant Embryogenesis. Plant Cell (1993) 3.97
Auxin response factors. Curr Opin Plant Biol (2007) 3.97
PLETHORA proteins as dose-dependent master regulators of Arabidopsis root development. Nature (2007) 3.95
Arabidopsis cytokinin receptor mutants reveal functions in shoot growth, leaf senescence, seed size, germination, root development, and cytokinin metabolism. Plant Cell (2005) 3.93
Expression dynamics of WOX genes mark cell fate decisions during early embryonic patterning in Arabidopsis thaliana. Development (2004) 3.93
Morphogen gradient interpretation. Nature (2001) 3.90
Coordinated polar localization of auxin efflux carrier PIN1 by GNOM ARF GEF. Science (1999) 3.89
Conserved factors regulate signalling in Arabidopsis thaliana shoot and root stem cell organizers. Nature (2007) 3.84
Antagonistic regulation of PIN phosphorylation by PP2A and PINOID directs auxin flux. Cell (2007) 3.84
MicroRNA regulation of NAC-domain targets is required for proper formation and separation of adjacent embryonic, vegetative, and floral organs. Curr Biol (2004) 3.63
The CLAVATA1 receptor-like kinase requires CLAVATA3 for its assembly into a signaling complex that includes KAPP and a Rho-related protein. Plant Cell (1999) 3.62
Stomatal development and patterning are regulated by environmentally responsive mitogen-activated protein kinases in Arabidopsis. Plant Cell (2007) 3.60
A novel two-component hybrid molecule regulates vascular morphogenesis of the Arabidopsis root. Genes Dev (2000) 3.60
An evolutionarily conserved mechanism delimiting SHR movement defines a single layer of endodermis in plants. Science (2007) 3.55
Members of the YABBY gene family specify abaxial cell fate in Arabidopsis. Development (1999) 3.51
TOPLESS mediates auxin-dependent transcriptional repression during Arabidopsis embryogenesis. Science (2008) 3.42
Shoot-derived auxin is essential for early lateral root emergence in Arabidopsis seedlings. Plant J (2002) 3.38
Studies on the role of the Arabidopsis gene MONOPTEROS in vascular development and plant cell axialization. Planta (1996) 3.34
Regulation of auxin response by the protein kinase PINOID. Cell (2000) 3.32
Arabidopsis CLV3 peptide directly binds CLV1 ectodomain. Science (2008) 3.31
Expansion of the receptor-like kinase/Pelle gene family and receptor-like proteins in Arabidopsis. Plant Physiol (2003) 3.25
Histidine kinase homologs that act as cytokinin receptors possess overlapping functions in the regulation of shoot and root growth in Arabidopsis. Plant Cell (2004) 3.24
Establishment of polarity in lateral organs of plants. Curr Biol (2001) 3.22
Auxin receptors and plant development: a new signaling paradigm. Annu Rev Cell Dev Biol (2008) 3.21
Short-range control of cell differentiation in the Arabidopsis root meristem. Nature (1997) 3.20
Cell-specific nitrogen responses mediate developmental plasticity. Proc Natl Acad Sci U S A (2008) 3.17
Class III homeodomain-leucine zipper gene family members have overlapping, antagonistic, and distinct roles in Arabidopsis development. Plant Cell (2004) 3.17
Auxin: the looping star in plant development. Annu Rev Plant Biol (2008) 2.94
The Arabidopsis BODENLOS gene encodes an auxin response protein inhibiting MONOPTEROS-mediated embryo patterning. Genes Dev (2002) 2.90
A MAPKK kinase gene regulates extra-embryonic cell fate in Arabidopsis. Cell (2004) 2.88
KANADI regulates organ polarity in Arabidopsis. Nature (2001) 2.87
Cytokinin and auxin interaction in root stem-cell specification during early embryogenesis. Nature (2008) 2.84
Shoot apical meristem and cotyledon formation during Arabidopsis embryogenesis: interaction among the CUP-SHAPED COTYLEDON and SHOOT MERISTEMLESS genes. Development (1999) 2.68
The auxin-insensitive bodenlos mutation affects primary root formation and apical-basal patterning in the Arabidopsis embryo. Development (1999) 2.56
ASYMMETRIC LEAVES1 reveals knox gene redundancy in Arabidopsis. Development (2002) 2.55
The CUP-SHAPED COTYLEDON3 gene is required for boundary and shoot meristem formation in Arabidopsis. Plant Cell (2003) 2.52
Nuclear endosperm development in cereals and Arabidopsis thaliana. Plant Cell (2004) 2.51
Dynamic integration of auxin transport and signalling. Curr Biol (2006) 2.47
The Arabidopsis thaliana MERISTEM LAYER 1 promoter specifies epidermal expression in meristems and young primordia. Plant J (1999) 2.43
Retracted Generation of cell polarity in plants links endocytosis, auxin distribution and cell fate decisions. Nature (2008) 2.42
MicroRNA regulation of the CUC genes is required for boundary size control in Arabidopsis meristems. Development (2004) 2.41
Developmental specificity of auxin response by pairs of ARF and Aux/IAA transcriptional regulators. EMBO J (2005) 2.35
Female gametophyte development. Plant Cell (2004) 2.33
TCP transcription factors control the morphology of shoot lateral organs via negative regulation of the expression of boundary-specific genes in Arabidopsis. Plant Cell (2007) 2.30
Mutations in the FASS gene uncouple pattern formation and morphogenesis in Arabidopsis development. Development (1994) 2.27
Overlapping and non-redundant functions of the Arabidopsis auxin response factors MONOPTEROS and NONPHOTOTROPIC HYPOCOTYL 4. Development (2004) 2.27
Paternal control of embryonic patterning in Arabidopsis thaliana. Science (2009) 2.25
Regulation of Arabidopsis shoot apical meristem and lateral organ formation by microRNA miR166g and its AtHD-ZIP target genes. Development (2005) 2.24
Asymmetric leaf development and blade expansion in Arabidopsis are mediated by KANADI and YABBY activities. Development (2004) 2.24
Functional differentiation of endosomes in Arabidopsis cells. Plant J (2004) 2.16
The axr6 mutants of Arabidopsis thaliana define a gene involved in auxin response and early development. Development (2000) 2.12
Auxin triggers transient local signaling for cell specification in Arabidopsis embryogenesis. Dev Cell (2006) 2.03
PIN-FORMED1 and PINOID regulate boundary formation and cotyledon development in Arabidopsis embryogenesis. Development (2004) 1.97
Polar targeting and endocytic recycling in auxin-dependent plant development. Annu Rev Cell Dev Biol (2008) 1.92
Auxin influx carriers stabilize phyllotactic patterning. Genes Dev (2008) 1.92
Control of leaf vascular patterning by polar auxin transport. Genes Dev (2006) 4.77
The developmental dynamics of the maize leaf transcriptome. Nat Genet (2010) 4.02
MAX4 and RMS1 are orthologous dioxygenase-like genes that regulate shoot branching in Arabidopsis and pea. Genes Dev (2003) 2.90
Auxin signaling in Arabidopsis leaf vascular development. Plant Physiol (2003) 2.75
Overlapping and non-redundant functions of the Arabidopsis auxin response factors MONOPTEROS and NONPHOTOTROPIC HYPOCOTYL 4. Development (2004) 2.27
NLStradamus: a simple Hidden Markov Model for nuclear localization signal prediction. BMC Bioinformatics (2009) 2.11
Stage-specific markers define early steps of procambium development in Arabidopsis leaves and correlate termination of vein formation with mesophyll differentiation. Development (2004) 1.88
Auxin acts in xylem-associated or medullary cells to mediate apical dominance. Plant Cell (2003) 1.75
Genetic complexity of cellulose synthase a gene function in Arabidopsis embryogenesis. Plant Physiol (2002) 1.49
Transcriptional control of nutrient partitioning during rice grain filling. Plant Biotechnol J (2003) 1.45
Spatio-temporal sequence of cross-regulatory events in root meristem growth. Proc Natl Acad Sci U S A (2010) 1.23
AMP1 and MP antagonistically regulate embryo and meristem development in Arabidopsis. Development (2007) 1.14
Discharge before noon: an achievable hospital goal. J Hosp Med (2014) 1.08
Deletion of MP/ARF5 domains III and IV reveals a requirement for Aux/IAA regulation in Arabidopsis leaf vascular patterning. New Phytol (2012) 1.06
Apical-basal polarity: why plant cells don't stand on their heads. Trends Plant Sci (2005) 1.04
Rapid, microscale, acetyl bromide-based method for high-throughput determination of lignin content in Arabidopsis thaliana. J Agric Food Chem (2008) 0.96
BlastDigester--a web-based program for efficient CAPS marker design. Trends Genet (2004) 0.94
Multiple MONOPTEROS-dependent pathways are involved in leaf initiation. Plant Physiol (2008) 0.90
Multiple horizontal gene transfer events and domain fusions have created novel regulatory and metabolic networks in the oomycete genome. PLoS One (2009) 0.90
Distinct subclades of Aux/IAA genes are direct targets of ARF5/MP transcriptional regulation. New Phytol (2014) 0.85
Tissue-specific GAL4 expression patterns as a resource enabling targeted gene expression, cell type-specific transcript profiling and gene function characterization in the Arabidopsis vascular system. Plant Cell Physiol (2008) 0.83
POPCORN functions in the auxin pathway to regulate embryonic body plan and meristem organization in Arabidopsis. Plant Cell (2011) 0.82
A dominant mutation reveals asymmetry in MP/ARF5 function along the adaxial-abaxial axis of shoot lateral organs. Plant Signal Behav (2012) 0.81
Irrepressible MONOPTEROS/ARF5 promotes de novo shoot formation. New Phytol (2014) 0.81
A plant-specific HUA2-LIKE (HULK) gene family in Arabidopsis thaliana is essential for development. Plant J (2014) 0.80
Glow in the dark: fluorescent proteins as cell and tissue-specific markers in plants. Mol Plant (2011) 0.80
Identification of quantitative trait loci controlling fibre length and lignin content in Arabidopsis thaliana stems. J Exp Bot (2012) 0.80
Double-filter identification of vascular-expressed genes using Arabidopsis plants with vascular hypertrophy and hypotrophy. Plant Sci (2011) 0.79
Irrepressible, truncated auxin response factors: natural roles and applications in dissecting auxin gene regulation pathways. Plant Signal Behav (2012) 0.77
The identification and characterization of specific ARF-Aux/IAA regulatory modules in plant growth and development. Plant Signal Behav (2015) 0.75
Expanding ecological and evolutionary insights from wild Arabidopsis thaliana accessions. Plant Signal Behav (2009) 0.75
Overcoming recalcitrance - Auxin response factor functions in plant regeneration. Plant Signal Behav (2015) 0.75
Polymerization of glucans by enzymatically active membranes. Biotechnol Prog (2002) 0.75
Visualizing auxin transport routes in Arabidopsis leaf primordia. Methods Mol Biol (2009) 0.75
Lz-0 × Berkeley: a new Arabidopsis recombinant inbred line population for the mapping of complex traits. Mol Genet Genomics (2014) 0.75