Published in Nucleic Acids Res on July 13, 2012
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Dynamically and epigenetically coordinated GATA/ETS/SOX transcription factor expression is indispensable for endothelial cell differentiation. Nucleic Acids Res (2017) 0.75
High-resolution profiling of histone methylations in the human genome. Cell (2007) 85.74
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells. Nature (2007) 65.18
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CAGE: cap analysis of gene expression. Nat Methods (2006) 5.04
STAMP: a web tool for exploring DNA-binding motif similarities. Nucleic Acids Res (2007) 4.92
Limitations and potentials of current motif discovery algorithms. Nucleic Acids Res (2005) 4.28
An algorithm for finding signals of unknown length in DNA sequences. Bioinformatics (2001) 3.71
Nanog and transcriptional networks in embryonic stem cell pluripotency. Cell Res (2007) 3.56
Universal protein-binding microarrays for the comprehensive characterization of the DNA-binding specificities of transcription factors. Nat Protoc (2009) 3.48
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The two positively acting regulatory proteins PHO2 and PHO4 physically interact with PHO5 upstream activation regions. Mol Cell Biol (1989) 2.60
Quantitative analysis demonstrates most transcription factors require only simple models of specificity. Nat Biotechnol (2011) 2.58
Identifying transcription factor functions and targets by phenotypic activation. Proc Natl Acad Sci U S A (2006) 2.39
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Deciphering gene expression regulatory networks. Curr Opin Genet Dev (2002) 2.09
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The forkhead protein Fkh2 is a component of the yeast cell cycle transcription factor SFF. EMBO J (2000) 1.95
Multiple transcriptional activation complexes tether the yeast activator Met4 to DNA. EMBO J (1998) 1.84
Evidence-ranked motif identification. Genome Biol (2010) 1.75
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High resolution models of transcription factor-DNA affinities improve in vitro and in vivo binding predictions. PLoS Comput Biol (2010) 1.52
De novo motif identification improves the accuracy of predicting transcription factor binding sites in ChIP-Seq data analysis. Nucleic Acids Res (2010) 1.30
Improved benchmarks for computational motif discovery. BMC Bioinformatics (2007) 1.29
Molecular determinants of the cell-cycle regulated Mcm1p-Fkh2p transcription factor complex. Nucleic Acids Res (2003) 1.26
Dissection of combinatorial control by the Met4 transcriptional complex. Mol Biol Cell (2009) 1.22
Identification of context-dependent motifs by contrasting ChIP binding data. Bioinformatics (2010) 1.19
Deciphering the underlying mechanism of specification and differentiation: the sea urchin gene regulatory network. Sci STKE (2006) 0.92
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Solution structure of the B3 DNA binding domain of the Arabidopsis cold-responsive transcription factor RAV1. Plant Cell (2004) 1.40
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Pathway to psychiatric care in Japan: A multicenter observational study. Int J Ment Health Syst (2008) 1.08
Structures and evolutionary origins of plant-specific transcription factor DNA-binding domains. Plant Physiol Biochem (2008) 1.01
Comorbid childhood gender identity disorder in a boy with Asperger syndrome. Psychiatry Clin Neurosci (2008) 1.00
Nationwide survey of work environment, work-life balance and burnout among psychiatrists in Japan. PLoS One (2013) 0.99
Quantitative analysis of brain perfusion SPECT in Alzheimer's disease using a fully automated regional cerebral blood flow quantification software, 3DSRT. J Neurol Sci (2007) 0.97
Does the 'hikikomori' syndrome of social withdrawal exist outside Japan? A preliminary international investigation. Soc Psychiatry Psychiatr Epidemiol (2011) 0.94
Possible mechanism of proton transfer through peptide groups in the H-pathway of the bovine cytochrome c oxidase. J Am Chem Soc (2007) 0.93
Editing mechanism of aminoacyl-tRNA synthetases operates by a hybrid ribozyme/protein catalyst. J Am Chem Soc (2010) 0.93
Apolipoprotein E4 frequencies in a Japanese population with Alzheimer's disease and dementia with Lewy bodies. PLoS One (2011) 0.87
Effect of antidepressants on brain-derived neurotrophic factor (BDNF) release from platelets in the rats. Prog Neuropsychopharmacol Biol Psychiatry (2010) 0.85
Solution structure and DNA-binding mode of the matrix attachment region-binding domain of the transcription factor SATB1 that regulates the T-cell maturation. J Biol Chem (2005) 0.85
Decreased cardiac MIBG uptake, its correlation with clinical symptoms in dementia with Lewy bodies. Psychiatry Res (2009) 0.83
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Functional roles of a structural element involving Na+-pi interactions in the catalytic site of T1 lipase revealed by molecular dynamics simulations. J Am Chem Soc (2009) 0.82
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Lithium-induced suppression of transcription repressor NRSF/REST: effects on the dysfunction of neuronal differentiation by ethanol. Eur J Pharmacol (2008) 0.81
Attitudes of patients and family members towards implantable psychiatric medication. Schizophr Res (2008) 0.80
Ataxic Guillain-Barré syndrome associated with anti-GM1b and anti-GalNAc-GD1a antibodies. J Neurol (2004) 0.80
The study of cognitive characteristics in Asperger's disorder by using a modified Prisoner's Dilemma game with a variable payoff matrix. PLoS One (2012) 0.79
Prescription pattern of antipsychotic drugs for schizophrenic inpatients in Japan: research on East Asia Psychotropic Prescription Pattern-Antipsychotics study. Psychiatry Clin Neurosci (2006) 0.79
Recent advances in jointed quantum mechanics and molecular mechanics calculations of biological macromolecules: schemes and applications coupled to ab initio calculations. J Phys Condens Matter (2010) 0.79
Identification of the nucleophilic factors and the productive complex for the editing reaction by leucyl-tRNA synthetase. FEBS Lett (2009) 0.79
[Views on the new psychiatric specialist certification system from the perspective of those experiencing the postgraduate psychiatric training system in Japan]. Seishin Shinkeigaku Zasshi (2011) 0.78
Electronic and geometric structures of the blue copper site of azurin investigated by QM/MM hybrid calculations. J Phys Condens Matter (2009) 0.78
WISC-III profiles of subjects with high-functioning pervasive developmental disorders who visited child and adolescent psychiatry clinics at a university hospital. Psychiatry Clin Neurosci (2009) 0.78
Decreased blood perfusion in right thalamus after transient global amnesia demonstrated by an automated program, 3DSRT. Psychiatry Clin Neurosci (2008) 0.77
Two-layer appearance on brain perfusion SPECT in idiopathic normal pressure hydrocephalus: a qualitative analysis by using easy Z-score imaging system, eZIS. Dement Geriatr Cogn Disord (2009) 0.77
Introducing the concept of modern depression in Japan; an international case vignette survey. J Affect Disord (2011) 0.77
QM/MM hybrid calculation of biological macromolecules using a new interface program connecting QM and MM engines. J Phys Condens Matter (2009) 0.77
[Epigenetic regulation in alcohol-related brain damage]. Nihon Arukoru Yakubutsu Igakkai Zasshi (2008) 0.77
Modulation of electronic structures of bases through DNA recognition of protein. J Phys Condens Matter (2010) 0.76
Effects of atelocollagen on neural stem cell function and its migrating capacity into brain in psychiatric disease model. J Neural Transm (Vienna) (2013) 0.76
First-principles molecular dynamics study of proton transfer mechanism in bovine cytochrome c oxidase. J Phys Condens Matter (2007) 0.76
Structural modelling of the complex of leucyl-tRNA synthetase and mis-aminoacylated tRNALeu. FEBS Lett (2009) 0.76
A theoretical investigation of the functional role of the axial methionine ligand of the Cu(A) site in cytochrome c oxidase. Biochim Biophys Acta (2011) 0.76
First principles molecular dynamics study of catalytic reactions of biological macromolecular systems: toward analyses with QM/MM hybrid molecular simulations. J Phys Condens Matter (2007) 0.76
The common aspects of pathophysiolgy of alcoholism and depression. Nihon Arukoru Yakubutsu Igakkai Zasshi (2009) 0.76
Effective pumping proton collection facilitated by a copper site (CuB) of bovine heart cytochrome c oxidase, revealed by a newly developed time-resolved infrared system. J Biol Chem (2013) 0.76
Biological applications of hybrid quantum mechanics/molecular mechanics calculation. J Biomed Biotechnol (2012) 0.75
Impact of biopsychosocial factors on psychiatric training in Japan and overseas: are psychiatrists oriented to mind, brain, or sociocultural issues? Psychiatry Clin Neurosci (2010) 0.75
[Promising therapy of neural stem cell transplantation for FASD model--neural network reconstruction and behavior recovery]. Nihon Arukoru Yakubutsu Igakkai Zasshi (2011) 0.75
[Possible alterations in brain neural network by ethanol]. Nihon Arukoru Yakubutsu Igakkai Zasshi (2004) 0.75
Evaluation of stabilization energies in π-π and cation-π interactions involved in biological macromolecules by ab initio calculations. J Phys Condens Matter (2009) 0.75
Successful olanzapine treatment of anorexia nervosa in a girl with pervasive developmental disorder not otherwise specified. Psychiatry Clin Neurosci (2008) 0.75
[The analysis of impairment and repair of neural network by ethanol: in vitro and in vivo studies using neurons and neural stem cells]. Nihon Arukoru Yakubutsu Igakkai Zasshi (2008) 0.75
[A thought on postgraduate psychiatric education from the viewpoint of residents in the latter stage of training based on the system of training of psychiatric specialists--the latter part of the psychiatric training at university hospitals]. Seishin Shinkeigaku Zasshi (2009) 0.75
[Improved diagnosis of dementia with Lewy bodies by the combination of 123I-metaiodobenzylguanidine (MIBG) myocardial scintigraphy and 99mTc-ethylcysteinate dimmer (ECD) brain perfusion SPECT]. Seishin Shinkeigaku Zasshi (2008) 0.75
[Issues and the current situation of the new compulsory residency training program in Japan: the results of an attitude survey for young career psychiatrists]. Seishin Shinkeigaku Zasshi (2010) 0.75
Current status of child and adolescent psychiatry in Japan. Seishin Shinkeigaku Zasshi (2010) 0.75
A novel computational scheme for accurate and efficient evaluation of π-π and π-σ stacking. J Phys Condens Matter (2009) 0.75
Outcomes of a culturally responsive health promotion program for elderly Korean survivors of gastrointestinal cancers: a randomized controlled trial. Geriatr Nurs (2013) 0.75
[Neural network abnormalities caused by alcohol: approach for repair using neural stem cells]. Nihon Shinkei Seishin Yakurigaku Zasshi (2008) 0.75
[Re-evaluation of the "road to becoming a psychiatrist"--learning from the interaction with young psychiatrists from overseas]. Seishin Shinkeigaku Zasshi (2009) 0.75
[Initial treatment and behavior restriction in the treatment of schizophrenia in the acute stage--a survey on the attitude of young psychiatrists]. Seishin Shinkeigaku Zasshi (2010) 0.75
[Expectations for the XIII World Congress of Psychiatry in Cairo]. Seishin Shinkeigaku Zasshi (2005) 0.75
[Postgraduate psychiatric training in Japan]. Seishin Shinkeigaku Zasshi (2009) 0.75