Published in Funct Integr Genomics on October 21, 2012
A sequence-ready physical map of barley anchored genetically by two million single-nucleotide polymorphisms. Plant Physiol (2013) 1.17
Mapping-by-sequencing accelerates forward genetics in barley. Genome Biol (2014) 0.99
Advances in biotechnology and informatics to link variation in the genome to phenotypes in plants and animals. Funct Integr Genomics (2013) 0.78
Primer3 on the WWW for general users and for biologist programmers. Methods Mol Biol (2000) 128.08
Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics (2003) 100.88
A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species. PLoS One (2011) 15.19
agriGO: a GO analysis toolkit for the agricultural community. Nucleic Acids Res (2010) 10.53
Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature (2010) 9.52
Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics (2009) 4.23
Control of tillering in rice. Nature (2003) 3.73
Cytologically integrated physical restriction fragment length polymorphism maps for the barley genome based on translocation breakpoints. Genetics (2000) 3.05
Unlocking the barley genome by chromosomal and comparative genomics. Plant Cell (2011) 3.03
A new resource for cereal genomics: 22K barley GeneChip comes of age. Plant Physiol (2004) 2.33
Signal integration in the control of shoot branching. Nat Rev Mol Cell Biol (2011) 2.29
Shoot branching. Annu Rev Plant Biol (2005) 2.25
Genetic dissection of barley morphology and development. Plant Physiol (2010) 1.61
A high-density transcript linkage map of barley derived from a single population. Heredity (Edinb) (2009) 1.59
Transcriptome analysis of the barley-Fusarium graminearum interaction. Mol Plant Microbe Interact (2006) 1.46
Common regulatory themes in meristem development and whole-plant homeostasis. Curr Opin Plant Biol (2006) 1.39
Shoot and inflorescence branching. Curr Opin Plant Biol (2005) 1.37
Hormonal regulation of branching in grasses. Plant Physiol (2009) 1.30
Natural variation among Arabidopsis thaliana accessions for transcriptome response to exogenous salicylic acid. Plant Cell (2007) 1.21
Evidence and evolutionary analysis of ancient whole-genome duplication in barley predating the divergence from rice. BMC Evol Biol (2009) 1.19
Genomic consequences of background effects on scalloped mutant expressivity in the wing of Drosophila melanogaster. Genetics (2008) 1.15
Structure and expression analysis of rice paleo duplications. Nucleic Acids Res (2009) 1.13
Intergenic locations of rice centromeric chromatin. PLoS Biol (2008) 1.13
Hormone signaling in plant development. Curr Opin Plant Biol (2012) 1.03
Transcriptome analysis and physical mapping of barley genes in wheat-barley chromosome addition lines. Genetics (2005) 0.95
Single-feature polymorphism discovery by computing probe affinity shape powers. BMC Genet (2009) 0.91
Genetic and morphological characterization of the barley uniculm2 (cul2) mutant. Theor Appl Genet (2003) 0.91
High resolution mapping of Dense spike-ar (dsp.ar) to the genetic centromere of barley chromosome 7H. Theor Appl Genet (2011) 0.89
Arabidopsis inositol polyphosphate 6-/3-kinase (AtIpk2beta) is involved in axillary shoot branching via auxin signaling. Plant Physiol (2007) 0.83
The genetics of barley low-tillering mutants: low number of tillers-1 (lnt1). Theor Appl Genet (2010) 0.82
The genetics of barley low-tillering mutants: absent lower laterals (als). Theor Appl Genet (2009) 0.81
A physical, genetic and functional sequence assembly of the barley genome. Nature (2012) 7.25
Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics (2009) 4.23
A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits. BMC Genomics (2006) 3.18
RNA-Seq Atlas of Glycine max: a guide to the soybean transcriptome. BMC Plant Biol (2010) 3.12
A structured mutant population for forward and reverse genetics in Barley (Hordeum vulgare L.). Plant J (2004) 2.77
A new resource for cereal genomics: 22K barley GeneChip comes of age. Plant Physiol (2004) 2.33
Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ). Plant J (2013) 2.02
INTERMEDIUM-C, a modifier of lateral spikelet fertility in barley, is an ortholog of the maize domestication gene TEOSINTE BRANCHED 1. Nat Genet (2011) 1.63
Structural variants in the soybean genome localize to clusters of biotic stress-response genes. Plant Physiol (2012) 1.48
Transcriptome analysis of the barley-Fusarium graminearum interaction. Mol Plant Microbe Interact (2006) 1.46
Phenotypic and genomic analyses of a fast neutron mutant population resource in soybean. Plant Physiol (2011) 1.45
Genome-wide discovery and characterization of maize long non-coding RNAs. Genome Biol (2014) 1.45
The composition and origins of genomic variation among individuals of the soybean reference cultivar Williams 82. Plant Physiol (2010) 1.42
Development of a Fusarium graminearum Affymetrix GeneChip for profiling fungal gene expression in vitro and in planta. Fungal Genet Biol (2006) 1.41
Barley whole exome capture: a tool for genomic research in the genus Hordeum and beyond. Plant J (2013) 1.34
Complementary genetic and genomic approaches help characterize the linkage group I seed protein QTL in soybean. BMC Plant Biol (2010) 1.31
The emergence of whole genome association scans in barley. Curr Opin Plant Biol (2009) 1.30
Validation of a candidate deoxynivalenol-inactivating UDP-glucosyltransferase from barley by heterologous expression in yeast. Mol Plant Microbe Interact (2010) 1.27
Genic and nongenic contributions to natural variation of quantitative traits in maize. Genome Res (2012) 1.26
Ontogeny of the maize shoot apical meristem. Plant Cell (2012) 1.26
Transcriptome analysis of the barley-deoxynivalenol interaction: evidence for a role of glutathione in deoxynivalenol detoxification. Mol Plant Microbe Interact (2010) 1.24
Comparative transcriptomics in the Triticeae. BMC Genomics (2009) 1.19
Transcriptome analysis of trichothecene-induced gene expression in barley. Mol Plant Microbe Interact (2007) 1.18
A sequence-ready physical map of barley anchored genetically by two million single-nucleotide polymorphisms. Plant Physiol (2013) 1.17
Functional and comparative bioinformatic analysis of expressed genes from wheat spikes infected with Fusarium graminearum. Mol Plant Microbe Interact (2002) 1.15
Transcriptomic characterization of two major Fusarium resistance quantitative trait loci (QTLs), Fhb1 and Qfhs.ifa-5A, identifies novel candidate genes. Mol Plant Pathol (2013) 1.12
Distribution, functional impact, and origin mechanisms of copy number variation in the barley genome. Genome Biol (2013) 1.10
Overexpression of defense response genes in transgenic wheat enhances resistance to Fusarium head blight. Plant Cell Rep (2006) 1.06
Transcriptome analysis of a wheat near-isogenic line pair carrying Fusarium head blight-resistant and -susceptible alleles. Mol Plant Microbe Interact (2009) 1.06
A model wheat cultivar for transformation to improve resistance to Fusarium Head Blight. Plant Cell Rep (2005) 1.05
Transgenic Arabidopsis thaliana expressing a barley UDP-glucosyltransferase exhibit resistance to the mycotoxin deoxynivalenol. J Exp Bot (2012) 1.04
Association mapping of spot blotch resistance in wild barley. Mol Breed (2010) 1.02
An integrative approach to genomic introgression mapping. Plant Physiol (2010) 1.01
Transgenic wheat expressing a barley class II chitinase gene has enhanced resistance against Fusarium graminearum. J Exp Bot (2008) 1.00
Uncovering the Arabidopsis thaliana nectary transcriptome: investigation of differential gene expression in floral nectariferous tissues. BMC Plant Biol (2009) 1.00
Mendelian and non-Mendelian regulation of gene expression in maize. PLoS Genet (2013) 0.99
Effect of population size and unbalanced data sets on QTL detection using genome-wide association mapping in barley breeding germplasm. Theor Appl Genet (2011) 0.98
Genome-wide SNPs and re-sequencing of growth habit and inflorescence genes in barley: implications for association mapping in germplasm arrays varying in size and structure. BMC Genomics (2010) 0.96
Brd1 gene in maize encodes a brassinosteroid C-6 oxidase. PLoS One (2012) 0.96
Transcriptome analysis and physical mapping of barley genes in wheat-barley chromosome addition lines. Genetics (2005) 0.95
A comparative analysis of transcript abundance using SAGE and Affymetrix arrays. Funct Integr Genomics (2005) 0.93
Lr34-mediated leaf rust resistance in wheat: transcript profiling reveals a high energetic demand supported by transient recruitment of multiple metabolic pathways. Mol Plant Microbe Interact (2008) 0.92
Primary transcriptomes of Mycobacterium avium subsp. paratuberculosis reveal proprietary pathways in tissue and macrophages. BMC Genomics (2010) 0.92
Gene expression patterns are correlated with genomic and genic structure in soybean. Genome (2011) 0.91
A hAT superfamily transposase recruited by the cereal grass genome. Mol Genet Genomics (2006) 0.91
Single-feature polymorphism discovery by computing probe affinity shape powers. BMC Genet (2009) 0.91
Zearalenone-16-O-glucoside: a new masked mycotoxin. J Agric Food Chem (2014) 0.91
Transcript profiling of common bean (Phaseolus vulgaris L.) using the GeneChip Soybean Genome Array: optimizing analysis by masking biased probes. BMC Plant Biol (2010) 0.90
Identification of differential gene expression in Brassica rapa nectaries through expressed sequence tag analysis. PLoS One (2010) 0.89
Mapping barley genes to chromosome arms by transcript profiling of wheat-barley ditelosomic chromosome addition lines. Genome (2007) 0.89
Overexpression of the maize Teosinte Branched1 gene in wheat suppresses tiller development. Plant Cell Rep (2008) 0.89
Single nucleotide polymorphism mapping and alignment of recombinant chromosome substitution lines in barley. Plant Cell Physiol (2011) 0.88
Radial leaves of the maize mutant ragged seedling2 retain dorsiventral anatomy. Dev Biol (2005) 0.87
Marker-trait associations in Virginia Tech winter barley identified using genome-wide mapping. Theor Appl Genet (2012) 0.86
Host-Mycobacterium avium subsp. paratuberculosis interactome reveals a novel iron assimilation mechanism linked to nitric oxide stress during early infection. BMC Genomics (2013) 0.83
Aqueous-solution route to zinc telluride films for application to CO₂ reduction. Angew Chem Int Ed Engl (2014) 0.83
The genetics of barley low-tillering mutants: low number of tillers-1 (lnt1). Theor Appl Genet (2010) 0.82
The genetics of barley low-tillering mutants: absent lower laterals (als). Theor Appl Genet (2009) 0.81
Barley genetic variation: implications for crop improvement. Brief Funct Genomics (2014) 0.80
Photocatalytic synthesis of pure and water-dispersible graphene monosheets. Chemistry (2012) 0.79
Gene expression identifies heterogeneity of metastatic behavior among high-grade non-translocation associated soft tissue sarcomas. J Transl Med (2014) 0.79
Transcriptome analysis of a barley breeding program examines gene expression diversity and reveals target genes for malting quality improvement. BMC Genomics (2010) 0.77
Haplotype diversity and population structure in cultivated and wild barley evaluated for Fusarium head blight responses. Theor Appl Genet (2012) 0.77
Bacterial artificial chromosome-based physical map of Gibberella zeae (Fusarium graminearum). Genome (2007) 0.76
Examining the Transcriptional Response in Wheat Near-Isogenic Lines to Infection and Deoxynivalenol Treatment. Plant Genome (2016) 0.76
Quantitative trait loci conferring resistance to Fusarium head blight in barley respond differentially to Fusarium graminearum infection. Funct Integr Genomics (2010) 0.76
Chromosome size in diploid eukaryotic species centers on the average length with a conserved boundary. Mol Biol Evol (2011) 0.76