Published in Biophys J on December 05, 2012
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Bayesian Statistical Inference in Ion-Channel Models with Exact Missed Event Correction. Biophys J (2016) 0.98
Analyzing single-molecule time series via nonparametric Bayesian inference. Biophys J (2015) 0.93
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Computational tools to investigate genetic cardiac channelopathies. Front Physiol (2013) 0.78
Multiscale modelling of saliva secretion. Math Biosci (2014) 0.78
Making the most of clinical data: reviewing the role of pharmacokinetic-pharmacodynamic models of anti-malarial drugs. AAPS J (2014) 0.77
Computing rates of Markov models of voltage-gated ion channels by inverting partial differential equations governing the probability density functions of the conducting and non-conducting states. Math Biosci (2016) 0.75
Decoding Single Molecule Time Traces with Dynamic Disorder. PLoS Comput Biol (2016) 0.75
Modelling modal gating of ion channels with hierarchical Markov models. Proc Math Phys Eng Sci (2016) 0.75
Hierarchical Bayesian inference for ion channel screening dose-response data. Wellcome Open Res (2016) 0.75
Comparing two sequential Monte Carlo samplers for exact and approximate Bayesian inference on biological models. J R Soc Interface (2017) 0.75
Deciphering the regulation of P2X4 receptor channel gating by ivermectin using Markov models. PLoS Comput Biol (2017) 0.75
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Differential regulation of the InsP₃ receptor type-1 and -2 single channel properties by InsP₃, Ca²⁺ and ATP. J Physiol (2012) 1.26
MCMC estimation of Markov models for ion channels. Biophys J (2011) 1.25
A kinetic model for type I and II IP3R accounting for mode changes. Biophys J (2012) 1.08
Markov chain Monte Carlo fitting of single-channel data from inositol trisphosphate receptors. J Theor Biol (2008) 1.03
Utilizing the information content in two-state trajectories. Proc Natl Acad Sci U S A (2006) 0.96
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MCMC estimation of Markov models for ion channels. Biophys J (2011) 1.25
Reconstructing biochemical pathways from time course data. Proteomics (2007) 1.21
A mathematical model of airway and pulmonary arteriole smooth muscle. Biophys J (2007) 1.19
A multiscale, spatially distributed model of asthmatic airway hyper-responsiveness. J Theor Biol (2010) 1.18
Predictive modelling of gene expression from transcriptional regulatory elements. Brief Bioinform (2014) 1.17
Computational biology of cardiac myocytes: proposed standards for the physiome. J Exp Biol (2007) 1.16
Cytosolic Ca(2+) and Ca(2+)-activated Cl(-) current dynamics: insights from two functionally distinct mouse exocrine cells. J Physiol (2002) 1.11
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Gene network inference and visualization tools for biologists: application to new human transcriptome datasets. Nucleic Acids Res (2011) 1.08
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A multi-scale approach to airway hyperresponsiveness: from molecule to organ. Front Physiol (2012) 1.04
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Markov chain Monte Carlo fitting of single-channel data from inositol trisphosphate receptors. J Theor Biol (2008) 1.03
A mathematical model of fluid secretion from a parotid acinar cell. J Theor Biol (2007) 1.01
Using Physiome standards to couple cellular functions for rat cardiac excitation-contraction. Exp Physiol (2008) 1.00
A dynamic model of saliva secretion. J Theor Biol (2010) 0.99
A continuous-binding cross-linker model for passive airway smooth muscle. Biophys J (2010) 0.98
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A mathematical analysis of agonist- and KCl-induced Ca(2+) oscillations in mouse airway smooth muscle cells. Biophys J (2010) 0.95
The balance between inactivation and activation of the Na+-K+ pump underlies the triphasic accumulation of extracellular K+ during myocardial ischemia. Am J Physiol Heart Circ Physiol (2007) 0.95
A buffering SERCA pump in models of calcium dynamics. Biophys J (2006) 0.95
A stochastic model of calcium puffs based on single-channel data. Biophys J (2013) 0.93
Modeling hypertrophic IP3 transients in the cardiac myocyte. Biophys J (2007) 0.93
A kinetic model of the inositol trisphosphate receptor based on single-channel data. Biophys J (2009) 0.93
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Spatio-temporal calcium dynamics in pacemaking units of the interstitial cells of Cajal. J Theor Biol (2010) 0.89
A metabolite-sensitive, thermodynamically constrained model of cardiac cross-bridge cycling: implications for force development during ischemia. Biophys J (2010) 0.88
Cell cycle gene networks are associated with melanoma prognosis. PLoS One (2012) 0.88
Activation of store-operated calcium entry in airway smooth muscle cells: insight from a mathematical model. PLoS One (2013) 0.87
Efficiency of primary saliva secretion: an analysis of parameter dependence in dynamic single-cell and acinus models, with application to aquaporin knockout studies. J Membr Biol (2012) 0.86
Modelling calcium microdomains using homogenisation. J Theor Biol (2007) 0.86
Are buffers boring? Uniqueness and asymptotical stability of traveling wave fronts in the buffered bistable system. J Math Biol (2007) 0.85
A Bayesian search for transcriptional motifs. PLoS One (2010) 0.85
Sensitivity of NFAT cycling to cytosolic calcium concentration: implications for hypertrophic signals in cardiac myocytes. Biophys J (2009) 0.85
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Computational modeling of anoctamin 1 calcium-activated chloride channels as pacemaker channels in interstitial cells of Cajal. Am J Physiol Gastrointest Liver Physiol (2014) 0.83
Inositol trisphosphate receptor and ion channel models based on single-channel data. Chaos (2009) 0.82
Understanding anomalous delays in a model of intracellular calcium dynamics. Chaos (2010) 0.82
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Enzyme catalyzed reactions: from experiment to computational mechanism reconstruction. Comput Biol Chem (2009) 0.81
Calcium oscillations and waves generated by multiple release mechanisms in pancreatic acinar cells. Bull Math Biol (2006) 0.81
Inference of an in situ epidermal intracellular signaling cascade. Conf Proc IEEE Eng Med Biol Soc (2010) 0.81
Quantifying parenchymal tethering in a finite element simulation of a human lung slice under bronchoconstriction. Respir Physiol Neurobiol (2012) 0.81
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The importance of synergy between deep inspirations and fluidization in reversing airway closure. PLoS One (2012) 0.80
New approaches to modelling and analysis of biochemical reactions, pathways and networks. Prog Biophys Mol Biol (2004) 0.80
A quantitative analysis of electrolyte exchange in the salivary duct. Am J Physiol Gastrointest Liver Physiol (2012) 0.80
Modelling the effects of calcium waves and oscillations on saliva secretion. J Theor Biol (2012) 0.80
Depolarization-induced calcium responses in sympathetic neurons: relative contributions from Ca2+ entry, extrusion, ER/mitochondrial Ca2+ uptake and release, and Ca2+ buffering. J Gen Physiol (2007) 0.80
Integration of steady-state and temporal gene expression data for the inference of gene regulatory networks. PLoS One (2013) 0.79
Variation in 3β-hydroxysteroid dehydrogenase activity and in pregnenolone supply rate can paradoxically alter androstenedione synthesis. J Steroid Biochem Mol Biol (2011) 0.79
A graphical user interface for a method to infer kinetics and network architecture (MIKANA). PLoS One (2011) 0.78
A mathematical model of adult GnRH neurons in mouse brain and its bifurcation analysis. J Theor Biol (2011) 0.78
Using artificial neural networks to classify unknown volatile chemicals from the firings of insect olfactory sensory neurons. Conf Proc IEEE Eng Med Biol Soc (2011) 0.77
A global sensitivity tool for cardiac cell modeling: Application to ionic current balance and hypertrophic signaling. Conf Proc IEEE Eng Med Biol Soc (2010) 0.77
A Computational Model of the Dendron of the GnRH Neuron. Bull Math Biol (2014) 0.77
Regulation of electrical bursting in a spatiotemporal model of a GnRH neuron. Bull Math Biol (2013) 0.77
The role of enzyme compartmentalization on the regulation of steroid synthesis. J Theor Biol (2013) 0.77
A bifurcation analysis of two coupled calcium oscillators. Chaos (2001) 0.77
Modelling the transition from simple to complex Ca²⁺ oscillations in pancreatic acinar cells. J Biosci (2014) 0.76
NAIL, a software toolset for inferring, analyzing and visualizing regulatory networks. Bioinformatics (2015) 0.76
Multilayer perceptron classification of unknown volatile chemicals from the firing rates of insect olfactory sensory neurons and its application to biosensor design. Neural Comput (2012) 0.76
Changes in the criticality of Hopf bifurcations due to certain model reduction techniques in systems with multiple timescales. J Math Neurosci (2011) 0.75
Reply to response to 'What do aquaporin knockout studies tell us about fluid transport in epithelia?' Maclaren OJ, Sneyd J, Crampin EJ (2013) J Membr Biol 246:297-305. J Membr Biol (2014) 0.75
A biophysical model of adaptive noise filtering in the shark brain. Bull Math Biol (2014) 0.75
Predicting odorant chemical class from odorant descriptor values with an assembly of multi-layer perceptrons. Conf Proc IEEE Eng Med Biol Soc (2011) 0.75
A mathematical model of the effects of anoctamin-1 loss on intestinal slow wave entrainment. Conf Proc IEEE Eng Med Biol Soc (2017) 0.75
Modelling cellular and tissue function. Prog Biophys Mol Biol (2004) 0.75
Traveling waves in the discrete fast buffered bistable system. J Math Biol (2007) 0.75
A computational study of the role of mitochondrial organization on cardiac bioenergetics. Conf Proc IEEE Eng Med Biol Soc (2017) 0.75
A bifurcation analysis of calcium buffering. J Theor Biol (2006) 0.75