Published in Dev Cell on August 26, 2013
The yin-yang of hormones: cytokinin and auxin interactions in plant development. Plant Cell (2015) 1.20
Nitrate sensing by the maize root apex transition zone: a merged transcriptomic and proteomic survey. J Exp Bot (2015) 0.87
Translatome analyses capture of opposing tissue-specific brassinosteroid signals orchestrating root meristem differentiation. Proc Natl Acad Sci U S A (2015) 0.85
The never-ending story: from pluripotency to plant developmental plasticity. Development (2015) 0.83
Cytokinin-induced promotion of root meristem size in the fern Azolla supports a shoot-like origin of euphyllophyte roots. New Phytol (2015) 0.82
A P-Loop NTPase Regulates Quiescent Center Cell Division and Distal Stem Cell Identity through the Regulation of ROS Homeostasis in Arabidopsis Root. PLoS Genet (2016) 0.82
The co-chaperone p23 controls root development through the modulation of auxin distribution in the Arabidopsis root meristem. J Exp Bot (2015) 0.81
Function and regulation of transcription factors involved in root apical meristem and stem cell maintenance. Front Plant Sci (2015) 0.81
A SCARECROW-based regulatory circuit controls Arabidopsis thaliana meristem size from the root endodermis. Planta (2016) 0.79
Developmentally distinct activities of the exocyst enable rapid cell elongation and determine meristem size during primary root growth in Arabidopsis. BMC Plant Biol (2014) 0.79
Beneficial Microbes Affect Endogenous Mechanisms Controlling Root Development. Trends Plant Sci (2016) 0.78
The quiescent center and the stem cell niche in the adventitious roots of Arabidopsis thaliana. Plant Signal Behav (2016) 0.77
Topoisomerase II-associated protein PAT1H1 is involved in the root stem cell niche maintenance in Arabidopsis thaliana. Plant Cell Rep (2016) 0.77
PHABULOSA controls the quiescent center-independent root meristem activities in Arabidopsis thaliana. PLoS Genet (2015) 0.77
Experimental data and computational modeling link auxin gradient and development in the Arabidopsis root. Front Plant Sci (2014) 0.76
Hormone activities and the cell cycle machinery in immunity-triggered growth inhibition. J Exp Bot (2015) 0.76
The cytokinin side chain commands shooting. Dev Cell (2013) 0.75
Cytokinin acts through the auxin influx carrier AUX1 to regulate cell elongation in the root. Development (2016) 0.75
A dynamic genetic-hormonal regulatory network model explains multiple cellular behaviors of the root apical meristem of Arabidopsis thaliana. PLoS Comput Biol (2017) 0.75
Brassinazole resistant 1 (BZR1)-dependent brassinosteroid signalling pathway leads to ectopic activation of quiescent cell division and suppresses columella stem cell differentiation. J Exp Bot (2015) 0.75
A Case for Distributed Control of Local Stem Cell Behavior in Plants. Dev Cell (2016) 0.75
The Arabidopsis bZIP11 transcription factor links low-energy signalling to auxin-mediated control of primary root growth. PLoS Genet (2017) 0.75
Mechanisms of action of plant growth promoting bacteria. World J Microbiol Biotechnol (2017) 0.75
In Arabidopsis thaliana Cadmium Impact on the Growth of Primary Root by Altering SCR Expression and Auxin-Cytokinin Cross-Talk. Front Plant Sci (2017) 0.75
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells. Nature (2007) 65.18
Targeted gene expression as a means of altering cell fates and generating dominant phenotypes. Development (1993) 58.26
A bivalent chromatin structure marks key developmental genes in embryonic stem cells. Cell (2006) 48.80
An auxin-dependent distal organizer of pattern and polarity in the Arabidopsis root. Cell (1999) 9.05
The PIN auxin efflux facilitator network controls growth and patterning in Arabidopsis roots. Nature (2005) 8.20
Stem cells find their niche. Nature (2001) 7.98
The SCARECROW gene regulates an asymmetric cell division that is essential for generating the radial organization of the Arabidopsis root. Cell (1996) 7.46
A high-resolution root spatiotemporal map reveals dominant expression patterns. Science (2007) 6.60
Naturally occurring auxin transport regulators. Science (1988) 6.20
TAA1-mediated auxin biosynthesis is essential for hormone crosstalk and plant development. Cell (2008) 5.26
The GRAS gene family in Arabidopsis: sequence characterization and basic expression analysis of the SCARECROW-LIKE genes. Plant J (1999) 4.65
Transcriptional regulation of ROS controls transition from proliferation to differentiation in the root. Cell (2010) 4.19
Conserved factors regulate signalling in Arabidopsis thaliana shoot and root stem cell organizers. Nature (2007) 3.84
SCARECROW is involved in positioning the stem cell niche in the Arabidopsis root meristem. Genes Dev (2003) 3.80
An evolutionarily conserved mechanism delimiting SHR movement defines a single layer of endodermis in plants. Science (2007) 3.55
Gravity-regulated differential auxin transport from columella to lateral root cap cells. Proc Natl Acad Sci U S A (2003) 3.48
Cytokinins determine Arabidopsis root-meristem size by controlling cell differentiation. Curr Biol (2007) 3.25
Short-range control of cell differentiation in the Arabidopsis root meristem. Nature (1997) 3.20
Cell signalling by microRNA165/6 directs gene dose-dependent root cell fate. Nature (2010) 3.19
A genetic framework for the control of cell division and differentiation in the root meristem. Science (2008) 2.95
Auxin: the looping star in plant development. Annu Rev Plant Biol (2008) 2.94
Sites and regulation of auxin biosynthesis in Arabidopsis roots. Plant Cell (2005) 2.94
A Link between ethylene and auxin uncovered by the characterization of two root-specific ethylene-insensitive mutants in Arabidopsis. Plant Cell (2005) 2.86
Molecular analysis of SCARECROW function reveals a radial patterning mechanism common to root and shoot. Development (2000) 2.61
Transcriptional profile of the Arabidopsis root quiescent center. Plant Cell (2005) 2.55
Arabidopsis SHY2/IAA3 inhibits auxin-regulated gene expression. Plant Cell (2002) 2.53
Genetic evidence that the endodermis is essential for shoot gravitropism in Arabidopsis thaliana. Plant J (1998) 2.41
Differential regulation of an auxin-producing nitrilase gene family in Arabidopsis thaliana. Proc Natl Acad Sci U S A (1994) 2.36
The rate of cell differentiation controls the Arabidopsis root meristem growth phase. Curr Biol (2010) 2.33
Interaction between differentiating cell- and niche-derived signals in hematopoietic progenitor maintenance. Cell (2011) 2.31
Mosaic analyses using marked activation and deletion clones dissect Arabidopsis SCARECROW action in asymmetric cell division. Genes Dev (2004) 2.14
Spatiotemporal regulation of cell-cycle genes by SHORTROOT links patterning and growth. Nature (2010) 2.05
Cytokinin signaling networks. Annu Rev Plant Biol (2012) 2.05
Stem-cell niches: nursery rhymes across kingdoms. Nat Rev Mol Cell Biol (2007) 1.95
The Arabidopsis YUCCA1 flavin monooxygenase functions in the indole-3-pyruvic acid branch of auxin biosynthesis. Plant Cell (2011) 1.81
Arabidopsis ASA1 is important for jasmonate-mediated regulation of auxin biosynthesis and transport during lateral root formation. Plant Cell (2009) 1.71
A PHABULOSA/cytokinin feedback loop controls root growth in Arabidopsis. Curr Biol (2012) 1.61
A bistable circuit involving SCARECROW-RETINOBLASTOMA integrates cues to inform asymmetric stem cell division. Cell (2012) 1.53
Cytokinin regulation of auxin synthesis in Arabidopsis involves a homeostatic feedback loop regulated via auxin and cytokinin signal transduction. Plant Cell (2010) 1.52
Auxin regulates distal stem cell differentiation in Arabidopsis roots. Proc Natl Acad Sci U S A (2010) 1.48
Large-scale analysis of the GRAS gene family in Arabidopsis thaliana. Plant Mol Biol (2008) 1.46
Cytokinin-auxin crosstalk. Trends Plant Sci (2009) 1.42
Subcellular trafficking of PIN auxin efflux carriers in auxin transport. Eur J Cell Biol (2009) 1.40
The molecular basis of cytokinin function. Curr Opin Plant Biol (2009) 1.22
Plant stem cell niches: from signalling to execution. Curr Opin Plant Biol (2010) 1.07
A gene expression map of the Arabidopsis root. Science (2003) 9.95
The PIN auxin efflux facilitator network controls growth and patterning in Arabidopsis roots. Nature (2005) 8.20
A high-resolution root spatiotemporal map reveals dominant expression patterns. Science (2007) 6.60
Rapid synthesis of auxin via a new tryptophan-dependent pathway is required for shade avoidance in plants. Cell (2008) 5.55
A PINOID-dependent binary switch in apical-basal PIN polar targeting directs auxin efflux. Science (2004) 4.77
AtPIN4 mediates sink-driven auxin gradients and root patterning in Arabidopsis. Cell (2002) 4.56
The PLETHORA genes mediate patterning of the Arabidopsis root stem cell niche. Cell (2004) 4.52
Cell identity mediates the response of Arabidopsis roots to abiotic stress. Science (2008) 4.40
Transcriptional regulation of ROS controls transition from proliferation to differentiation in the root. Cell (2010) 4.19
PLETHORA proteins as dose-dependent master regulators of Arabidopsis root development. Nature (2007) 3.95
Conserved factors regulate signalling in Arabidopsis thaliana shoot and root stem cell organizers. Nature (2007) 3.84
SCARECROW is involved in positioning the stem cell niche in the Arabidopsis root meristem. Genes Dev (2003) 3.80
The auxin influx carrier LAX3 promotes lateral root emergence. Nat Cell Biol (2008) 3.69
An evolutionarily conserved mechanism delimiting SHR movement defines a single layer of endodermis in plants. Science (2007) 3.55
Whole-genome analysis of the SHORT-ROOT developmental pathway in Arabidopsis. PLoS Biol (2006) 3.52
Nitrate-regulated auxin transport by NRT1.1 defines a mechanism for nutrient sensing in plants. Dev Cell (2010) 3.44
Shoot-derived auxin is essential for early lateral root emergence in Arabidopsis seedlings. Plant J (2002) 3.38
Imaging and analysis platform for automatic phenotyping and trait ranking of plant root systems. Plant Physiol (2010) 3.30
Oscillating gene expression determines competence for periodic Arabidopsis root branching. Science (2010) 3.26
Cytokinins determine Arabidopsis root-meristem size by controlling cell differentiation. Curr Biol (2007) 3.25
Cell signalling by microRNA165/6 directs gene dose-dependent root cell fate. Nature (2010) 3.19
Ethylene upregulates auxin biosynthesis in Arabidopsis seedlings to enhance inhibition of root cell elongation. Plant Cell (2007) 3.14
An auxin gradient and maximum in the Arabidopsis root apex shown by high-resolution cell-specific analysis of IAA distribution and synthesis. Plant Cell (2009) 2.97
A genetic framework for the control of cell division and differentiation in the root meristem. Science (2008) 2.95
Ethylene regulates root growth through effects on auxin biosynthesis and transport-dependent auxin distribution. Plant Cell (2007) 2.92
Computer simulations reveal properties of the cell-cell signaling network at the shoot apex in Arabidopsis. Proc Natl Acad Sci U S A (2006) 2.88
The RETINOBLASTOMA-RELATED gene regulates stem cell maintenance in Arabidopsis roots. Cell (2005) 2.77
Cell type-specific expression profiling in plants via cell sorting of protoplasts from fluorescent reporter lines. Nat Methods (2005) 2.62
Transcriptional profile of the Arabidopsis root quiescent center. Plant Cell (2005) 2.55
Root-specific CLE19 overexpression and the sol1/2 suppressors implicate a CLV-like pathway in the control of Arabidopsis root meristem maintenance. Curr Biol (2003) 2.38
Trehalose 6-phosphate is indispensable for carbohydrate utilization and growth in Arabidopsis thaliana. Proc Natl Acad Sci U S A (2003) 2.37
The 14-amino acid CLV3, CLE19, and CLE40 peptides trigger consumption of the root meristem in Arabidopsis through a CLAVATA2-dependent pathway. Plant Cell (2005) 2.36
A novel glyco-conjugate vaccine against fungal pathogens. J Exp Med (2005) 2.35
The rate of cell differentiation controls the Arabidopsis root meristem growth phase. Curr Biol (2010) 2.33
FLOOZY of petunia is a flavin mono-oxygenase-like protein required for the specification of leaf and flower architecture. Genes Dev (2002) 2.27
Cell cycle progression in the pericycle is not sufficient for SOLITARY ROOT/IAA14-mediated lateral root initiation in Arabidopsis thaliana. Plant Cell (2005) 2.23
Transcriptional and posttranscriptional regulation of transcription factor expression in Arabidopsis roots. Proc Natl Acad Sci U S A (2006) 2.23
Control of Arabidopsis root development. Annu Rev Plant Biol (2012) 2.13
Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. Plant Physiol (2008) 2.13
COBRA, an Arabidopsis extracellular glycosyl-phosphatidyl inositol-anchored protein, specifically controls highly anisotropic expansion through its involvement in cellulose microfibril orientation. Plant Cell (2005) 2.06
Receptor-like kinase ACR4 restricts formative cell divisions in the Arabidopsis root. Science (2008) 2.06
Auxin and light control of adventitious rooting in Arabidopsis require ARGONAUTE1. Plant Cell (2005) 1.99
The bHLH transcription factor POPEYE regulates response to iron deficiency in Arabidopsis roots. Plant Cell (2010) 1.98
GiA Roots: software for the high throughput analysis of plant root system architecture. BMC Plant Biol (2012) 1.98
A molecular framework for plant regeneration. Science (2006) 1.98
Control of bud activation by an auxin transport switch. Proc Natl Acad Sci U S A (2009) 1.97
Hormonal control of the shoot stem-cell niche. Nature (2010) 1.96
Auxin regulates Arabidopsis anther dehiscence, pollen maturation, and filament elongation. Plant Cell (2008) 1.92
A regulated auxin minimum is required for seed dispersal in Arabidopsis. Nature (2009) 1.85
Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling. Plant J (2012) 1.84
Arabidopsis JACKDAW and MAGPIE zinc finger proteins delimit asymmetric cell division and stabilize tissue boundaries by restricting SHORT-ROOT action. Genes Dev (2007) 1.83
The Arabidopsis YUCCA1 flavin monooxygenase functions in the indole-3-pyruvic acid branch of auxin biosynthesis. Plant Cell (2011) 1.81
Linking photoreceptor excitation to changes in plant architecture. Genes Dev (2012) 1.80
Bimodular auxin response controls organogenesis in Arabidopsis. Proc Natl Acad Sci U S A (2010) 1.78
Interplay between the NADP-linked thioredoxin and glutathione systems in Arabidopsis auxin signaling. Plant Cell (2010) 1.76
From lab to field, new approaches to phenotyping root system architecture. Curr Opin Plant Biol (2011) 1.73
Trehalose mediated growth inhibition of Arabidopsis seedlings is due to trehalose-6-phosphate accumulation. Plant Physiol (2004) 1.71
Mechanisms regulating SHORT-ROOT intercellular movement. Curr Biol (2004) 1.70
Neisseria meningitidis GNA2132, a heparin-binding protein that induces protective immunity in humans. Proc Natl Acad Sci U S A (2010) 1.66
Mutations in the Dof zinc finger genes DAG2 and DAG1 influence with opposite effects the germination of Arabidopsis seeds. Plant Cell (2002) 1.65
Vectorial information for Arabidopsis planar polarity is mediated by combined AUX1, EIN2, and GNOM activity. Curr Biol (2006) 1.65
Requirement of B2-type cyclin-dependent kinases for meristem integrity in Arabidopsis thaliana. Plant Cell (2008) 1.62
A PHABULOSA/cytokinin feedback loop controls root growth in Arabidopsis. Curr Biol (2012) 1.61
Not just another hole in the wall: understanding intercellular protein trafficking. Genes Dev (2005) 1.61
A family of auxin-conjugate hydrolases that contributes to free indole-3-acetic acid levels during Arabidopsis germination. Plant Physiol (2004) 1.61
Maintenance of embryonic auxin distribution for apical-basal patterning by PIN-FORMED-dependent auxin transport in Arabidopsis. Plant Cell (2005) 1.60
Local auxin biosynthesis modulates gradient-directed planar polarity in Arabidopsis. Nat Cell Biol (2009) 1.59
A broad competence to respond to SHORT ROOT revealed by tissue-specific ectopic expression. Development (2004) 1.58
A bistable circuit involving SCARECROW-RETINOBLASTOMA integrates cues to inform asymmetric stem cell division. Cell (2012) 1.53
Transcriptome responses to combinations of stresses in Arabidopsis. Plant Physiol (2013) 1.53
Cytokinin regulation of auxin synthesis in Arabidopsis involves a homeostatic feedback loop regulated via auxin and cytokinin signal transduction. Plant Cell (2010) 1.52
Root gravitropism and root hair development constitute coupled developmental responses regulated by auxin homeostasis in the Arabidopsis root apex. New Phytol (2012) 1.52
Genotypic recognition and spatial responses by rice roots. Proc Natl Acad Sci U S A (2013) 1.52
A gradient of auxin and auxin-dependent transcription precedes tropic growth responses. Proc Natl Acad Sci U S A (2005) 1.51
The AUXIN BINDING PROTEIN 1 is required for differential auxin responses mediating root growth. PLoS One (2009) 1.51
Quantification of transcription factor expression from Arabidopsis images. Bioinformatics (2006) 1.50
A stele-enriched gene regulatory network in the Arabidopsis root. Mol Syst Biol (2011) 1.49
3D phenotyping and quantitative trait locus mapping identify core regions of the rice genome controlling root architecture. Proc Natl Acad Sci U S A (2013) 1.46
Strigolactone signaling is required for auxin-dependent stimulation of secondary growth in plants. Proc Natl Acad Sci U S A (2011) 1.43
Cytokinin-auxin crosstalk. Trends Plant Sci (2009) 1.42
Cell identity regulators link development and stress responses in the Arabidopsis root. Dev Cell (2011) 1.42
Cell polarity signaling in Arabidopsis involves a BFA-sensitive auxin influx pathway. Curr Biol (2002) 1.41
The COBRA family of putative GPI-anchored proteins in Arabidopsis. A new fellowship in expansion. Plant Physiol (2002) 1.39
Soluble carbohydrates regulate auxin biosynthesis via PIF proteins in Arabidopsis. Plant Cell (2012) 1.39
Short-Root regulates primary, lateral, and adventitious root development in Arabidopsis. Plant Physiol (2010) 1.38
Signaling in and out: control of cell division and differentiation in the shoot and root. Plant Cell (2002) 1.36
The protein expression landscape of the Arabidopsis root. Proc Natl Acad Sci U S A (2012) 1.36
Retracted The AFB4 auxin receptor is a negative regulator of auxin signaling in seedlings. Curr Biol (2011) 1.36