Published in DNA Repair (Amst) on October 31, 2013
Neurological disorders associated with DNA strand-break processing enzymes. Mech Ageing Dev (2016) 0.81
Quantitative characterization of protein-protein complexes involved in base excision DNA repair. Nucleic Acids Res (2015) 0.77
Efficient cleavage of single and clustered AP site lesions within mono-nucleosome templates by CHO-K1 nuclear extract contrasts with retardation of incision by purified APE1. DNA Repair (Amst) (2015) 0.77
Poly(ADP-ribose) polymerases covalently modify strand break termini in DNA fragments in vitro. Nucleic Acids Res (2016) 0.76
DNA repair abnormalities leading to ataxia: shared neurological phenotypes and risk factors. Neurogenetics (2014) 0.75
Poly(ADP-ribose)polymerase 1 stimulates the AP-site cleavage activity of tyrosyl-DNA phosphodiesterase 1. Biosci Rep (2015) 0.75
Dysregulated human Tyrosyl-DNA phosphodiesterase I acts as cellular toxin. Oncotarget (2016) 0.75
HMGB1 is a cofactor in mammalian base excision repair. Mol Cell (2007) 1.49
The major human AP endonuclease (Ape1) is involved in the nucleotide incision repair pathway. Nucleic Acids Res (2004) 1.42
The hMsh2-hMsh6 complex acts in concert with monoubiquitinated PCNA and Pol η in response to oxidative DNA damage in human cells. Mol Cell (2011) 1.34
AP endonuclease and poly(ADP-ribose) polymerase-1 interact with the same base excision repair intermediate. DNA Repair (Amst) (2004) 1.19
Human base excision repair enzymes apurinic/apyrimidinic endonuclease1 (APE1), DNA polymerase beta and poly(ADP-ribose) polymerase 1: interplay between strand-displacement DNA synthesis and proofreading exonuclease activity. Nucleic Acids Res (2005) 1.16
Enzymology of repair of etheno-adducts. Mutat Res (2003) 1.15
The 3'->5' exonuclease of Apn1 provides an alternative pathway to repair 7,8-dihydro-8-oxodeoxyguanosine in Saccharomyces cerevisiae. Mol Cell Biol (2005) 1.14
Cisplatin resistance associated with PARP hyperactivation. Cancer Res (2013) 1.11
Real-time studies of conformational dynamics of the repair enzyme E. coli formamidopyrimidine-DNA glycosylase and its DNA complexes during catalytic cycle. Mutat Res (2009) 1.09
Characterisation of new substrate specificities of Escherichia coli and Saccharomyces cerevisiae AP endonucleases. Nucleic Acids Res (2003) 1.08
XRCC1 interactions with base excision repair DNA intermediates. DNA Repair (Amst) (2006) 1.08
Analyzing the handoff of DNA from UvrA to UvrB utilizing DNA-protein photoaffinity labeling. J Biol Chem (2004) 1.07
A molecular beacon assay for measuring base excision repair activities. Biochem Biophys Res Commun (2004) 1.06
Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA. Nucleic Acids Res (2012) 1.06
DNA repair and the origins of urinary oxidized 2'-deoxyribonucleosides. Mutagenesis (2010) 1.05
Pre-steady-state kinetics shows differences in processing of various DNA lesions by Escherichia coli formamidopyrimidine-DNA glycosylase. Nucleic Acids Res (2004) 1.02
Characterisation of the substrate specificity of homogeneous vaccinia virus uracil-DNA glycosylase. Nucleic Acids Res (2003) 1.01
Ku antigen interacts with abasic sites. Biochim Biophys Acta (2008) 0.99
Major oxidative products of cytosine are substrates for the nucleotide incision repair pathway. DNA Repair (Amst) (2006) 0.99
Localization of xeroderma pigmentosum group A protein and replication protein A on damaged DNA in nucleotide excision repair. Nucleic Acids Res (2010) 0.98
Stopped-flow kinetic studies of the interaction between Escherichia coli Fpg protein and DNA substrates. Biochemistry (2002) 0.98
Alpha-anomeric deoxynucleotides, anoxic products of ionizing radiation, are substrates for the endonuclease IV-type AP endonucleases. Biochemistry (2004) 0.98
Human replication protein A. The C-terminal RPA70 and the central RPA32 domains are involved in the interactions with the 3'-end of a primer-template DNA. J Biol Chem (2003) 0.97
Photoaffinity labeling technique for studying DNA replication and DNA repair. Curr Med Chem (2005) 0.93
AP-site cleavage activity of tyrosyl-DNA phosphodiesterase 1. FEBS Lett (2011) 0.92
Comparative analysis of interaction of human and yeast DNA damage recognition complexes with damaged DNA in nucleotide excision repair. J Biol Chem (2013) 0.92
Human replication protein A (RPA) binds a primer-template junction in the absence of its major ssDNA-binding domains. Nucleic Acids Res (2004) 0.91
DNA polymerases beta and lambda bypass thymine glycol in gapped DNA structures. Biochemistry (2010) 0.91
Recognition of damaged DNA by Escherichia coli Fpg protein: insights from structural and kinetic data. Mutat Res (2003) 0.89
Apoptotic topoisomerase I-DNA complexes induced by staurosporine-mediated oxygen radicals. J Biol Chem (2004) 0.89
AP endonuclease 1 has no biologically significant 3(')-->5(')-exonuclease activity. Biochem Biophys Res Commun (2003) 0.88
2'-deoxyribonolactone lesion produces G->A transitions in Escherichia coli. Nucleic Acids Res (2004) 0.88
Genetic and biochemical characterization of human AP endonuclease 1 mutants deficient in nucleotide incision repair activity. PLoS One (2010) 0.86
Thermodynamic, kinetic and structural basis for recognition and repair of abasic sites in DNA by apurinic/apyrimidinic endonuclease from human placenta. Nucleic Acids Res (2004) 0.86
Photo-cross-linking of XPC-Rad23B to cisplatin-damaged DNA reveals contacts with both strands of the DNA duplex and spans the DNA adduct. Biochemistry (2010) 0.86
Characterization of two independent amino acid substitutions that disrupt the DNA repair functions of the yeast Apn1. Biochemistry (2003) 0.85
Tyrosyl-DNA phosphodiesterase 1 initiates repair of apurinic/apyrimidinic sites. Biochimie (2012) 0.85
Coupling of the nucleotide incision and 3'-->5' exonuclease activities in Escherichia coli endonuclease IV: Structural and genetic evidences. Mutat Res (2009) 0.85
Interaction of PARP-2 with DNA structures mimicking DNA repair intermediates and consequences on activity of base excision repair proteins. Biochimie (2013) 0.85
New insights in the removal of the hydantoins, oxidation product of pyrimidines, via the base excision and nucleotide incision repair pathways. PLoS One (2011) 0.84
Substrate specificity of homogeneous monkeypox virus uracil-DNA glycosylase. Biochemistry (2007) 0.84
Step-by-step mechanism of DNA damage recognition by human 8-oxoguanine DNA glycosylase. Biochim Biophys Acta (2013) 0.84
Comparison of functional properties of mammalian DNA polymerase lambda and DNA polymerase beta in reactions of DNA synthesis related to DNA repair. Biochim Biophys Acta (2005) 0.84
Human DNA polymerase λ catalyzes lesion bypass across benzo[a]pyrene-derived DNA adduct during base excision repair. DNA Repair (Amst) (2012) 0.83
Insight into mechanisms of 3'-5' exonuclease activity and removal of bulky 8,5'-cyclopurine adducts by apurinic/apyrimidinic endonucleases. Proc Natl Acad Sci U S A (2013) 0.82
Ddc1 checkpoint protein and DNA polymerase ɛ interact with nick-containing DNA repair intermediate in cell free extracts of Saccharomyces cerevisiae. DNA Repair (Amst) (2011) 0.82
Crosslinking of the NER damage recognition proteins XPC-HR23B, XPA and RPA to photoreactive probes that mimic DNA damages. Biochim Biophys Acta (2007) 0.82
Effect of the multifunctional proteins RPA, YB-1, and XPC repair factor on AP site cleavage by DNA glycosylase NEIL1. J Mol Recognit (2012) 0.82
Excision of 8-oxoguanine from methylated CpG dinucleotides by human 8-oxoguanine DNA glycosylase. FEBS Lett (2013) 0.81
Uracil in duplex DNA is a substrate for the nucleotide incision repair pathway in human cells. Proc Natl Acad Sci U S A (2013) 0.81
A new highly efficient photoreactive analogue of dCTP. Synthesis, characterization, and application in photoaffinity modification of DNA binding proteins. Bioconjug Chem (2005) 0.81
Disaccharide pyrimidine nucleosides and their derivatives: a novel group of cell-penetrating inhibitors of poly(ADP-ribose) polymerase 1. Nucleosides Nucleotides Nucleic Acids (2013) 0.80
tRNA discrimination by T. thermophilus phenylalanyl-tRNA synthetase at the binding step. J Mol Recognit (2002) 0.80
Functional characterization of the Caenorhabditis elegans DNA repair enzyme APN-1. DNA Repair (Amst) (2012) 0.80
RPA repair recognition of DNA containing pyrimidines bearing bulky adducts. J Mol Recognit (2008) 0.80
Action of multiple base excision repair enzymes on the 2'-deoxyribonolactone. Biochem Biophys Res Commun (2005) 0.80
Thermostable DNA polymerases can perform translesion synthesis using 8-oxoguanine and tetrahydrofuran-containing DNA templates. Biochim Biophys Acta (2005) 0.79
African swine fever virus AP endonuclease is a redox-sensitive enzyme that repairs alkylating and oxidative damage to DNA. Virology (2009) 0.79
Endogenous DNA damage clusters in human hematopoietic stem and progenitor cells. Free Radic Biol Med (2008) 0.79
Crosslinking of nucleotide excision repair proteins with DNA containing photoreactive damages. Bioorg Chem (2008) 0.78
Presence of base excision repair enzymes in the wheat aleurone and their activation in cells undergoing programmed cell death. Plant Physiol Biochem (2011) 0.78
Human and yeast DNA damage recognition complexes bind with high affinity DNA structures mimicking in size transcription bubble. J Mol Recognit (2013) 0.78
Characterization of Caenorhabditis elegans exonuclease-3 and evidence that a Mg2+-dependent variant exhibits a distinct mode of action on damaged DNA. Biochemistry (2005) 0.78
Highly mutagenic exocyclic DNA adducts are substrates for the human nucleotide incision repair pathway. PLoS One (2012) 0.78
DNA polymerase beta reveals enhanced activity and processivity in reverse micelles. Biophys Chem (2008) 0.77
7,8-Dihydro-8-oxoadenine, a highly mutagenic adduct, is repaired by Escherichia coli and human mismatch-specific uracil/thymine-DNA glycosylases. Nucleic Acids Res (2012) 0.77
Age-dependent increase of 8-oxoguanine-, hypoxanthine-, and uracil- DNA glycosylase activities in liver extracts from OXYS rats with inherited overgeneration of free radicals and Wistar rats. Med Sci Monit (2003) 0.77
Crystallization and preliminary X-ray analysis of human endonuclease 1 (APE1) in complex with an oligonucleotide containing a 5,6-dihydrouracil (DHU) or an alpha-anomeric 2'-deoxyadenosine (alphadA) modified base. Acta Crystallogr Sect F Struct Biol Cryst Commun (2010) 0.77
Efficiency of exonucleolytic action of apurinic/apyrimidinic endonuclease 1 towards matched and mismatched dNMP at the 3' terminus of different oligomeric DNA structures correlates with thermal stability of DNA duplexes. Biochim Biophys Acta (2006) 0.77
Mismatch dependent uracil/thymine-DNA glycosylases excise exocyclic hydroxyethano and hydroxypropano cytosine adducts. Acta Biochim Pol (2005) 0.77
Human DNA polymerases catalyze lesion bypass across benzo[a]pyrene-derived DNA adduct clustered with an abasic site. DNA Repair (Amst) (2014) 0.77
Photoaffinity labeling of proteins in bovine testis nuclear extract. Biochem Biophys Res Commun (2002) 0.76
High resolution characterization of formamidopyrimidine-DNA glycosylase interaction with its substrate by chemical cross-linking and mass spectrometry using substrate analogs. J Biol Chem (2006) 0.76
Clustered DNA lesions containing 5-formyluracil and AP site: repair via the BER system. PLoS One (2013) 0.76
Sequence-specific p53 gene damage by chloroacetaldehyde and its repair kinetics in Escherichia coli. Acta Biochim Pol (2006) 0.76
Lys98 substitution in human AP endonuclease 1 affects the kinetic mechanism of enzyme action in base excision and nucleotide incision repair pathways. PLoS One (2011) 0.75
Electronic structure and solvatochromism of merocyanines NMR spectroscopic point of view. Spectrochim Acta A Mol Biomol Spectrosc (2006) 0.75