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1
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Adaptive evolution of transcription factor binding sites.
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BMC Evol Biol
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2004
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2.03
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2
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Structure and evolution of protein interaction networks: a statistical model for link dynamics and gene duplications.
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BMC Evol Biol
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2004
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2.01
|
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3
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Cross-species analysis of biological networks by Bayesian alignment.
|
Proc Natl Acad Sci U S A
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2006
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1.69
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4
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Evolutionary population genetics of promoters: predicting binding sites and functional phylogenies.
|
Proc Natl Acad Sci U S A
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2005
|
1.68
|
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5
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Local graph alignment and motif search in biological networks.
|
Proc Natl Acad Sci U S A
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2004
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1.56
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6
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From fitness landscapes to seascapes: non-equilibrium dynamics of selection and adaptation.
|
Trends Genet
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2009
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1.50
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7
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Energy-dependent fitness: a quantitative model for the evolution of yeast transcription factor binding sites.
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Proc Natl Acad Sci U S A
|
2008
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1.49
|
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8
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Adaptations to fluctuating selection in Drosophila.
|
Proc Natl Acad Sci U S A
|
2007
|
1.45
|
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9
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Clonal interference in the evolution of influenza.
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Genetics
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2012
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1.37
|
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10
|
Biodiversity in model ecosystems, I: coexistence conditions for competing species.
|
J Theor Biol
|
2005
|
1.34
|
|
11
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Emergent neutrality in adaptive asexual evolution.
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Genetics
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2011
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1.32
|
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12
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Fitness flux and ubiquity of adaptive evolution.
|
Proc Natl Acad Sci U S A
|
2010
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1.29
|
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13
|
Correlated random networks.
|
Phys Rev Lett
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2002
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1.04
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14
|
Biodiversity in model ecosystems, II: species assembly and food web structure.
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J Theor Biol
|
2005
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1.03
|
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15
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Molecular evolution under fitness fluctuations.
|
Phys Rev Lett
|
2008
|
1.00
|
|
16
|
Solvable sequence evolution models and genomic correlations.
|
Phys Rev Lett
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2005
|
0.99
|
|
17
|
Nonlinear fitness landscape of a molecular pathway.
|
PLoS Genet
|
2011
|
0.98
|
|
18
|
Toward an accurate statistics of gapped alignments.
|
Bull Math Biol
|
2005
|
0.87
|
|
19
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Formation of regulatory modules by local sequence duplication.
|
PLoS Comput Biol
|
2011
|
0.85
|
|
20
|
Universality and predictability in molecular quantitative genetics.
|
Curr Opin Genet Dev
|
2013
|
0.82
|
|
21
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GraphAlignment: Bayesian pairwise alignment of biological networks.
|
BMC Syst Biol
|
2012
|
0.81
|
|
22
|
From protein interactions to functional annotation: graph alignment in Herpes.
|
BMC Syst Biol
|
2008
|
0.80
|
|
23
|
Significance analysis and statistical mechanics: an application to clustering.
|
Phys Rev Lett
|
2010
|
0.76
|
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24
|
Fitness landscape for nucleosome positioning.
|
Proc Natl Acad Sci U S A
|
2013
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0.76
|
|
25
|
Of statistics and genomes.
|
Trends Genet
|
2004
|
0.75
|
|
26
|
Delocalization transitions of semiflexible manifolds.
|
Phys Rev E Stat Nonlin Soft Matter Phys
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2002
|
0.75
|