Allerdictor: fast allergen prediction using text classification techniques.

PubWeight™: 0.80‹?›

🔗 View Article (PMID 24403538)

Published in Bioinformatics on January 07, 2014

Authors

Ha X Dang1, Christopher B Lawrence2

Author Affiliations

1: Virginia Bioinformatics Institute and Department of Biological Sciences, Virginia Tech, Blacksburg, VA 24061, USA.
2: Virginia Bioinformatics Institute and Department of Biological Sciences, Virginia Tech, Blacksburg, VA 24061, USA Virginia Bioinformatics Institute and Department of Biological Sciences, Virginia Tech, Blacksburg, VA 24061, USA.

Articles cited by this

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res (1997) 665.31

The global burden of asthma: executive summary of the GINA Dissemination Committee report. Allergy (2004) 13.16

UniProt Knowledgebase: a hub of integrated protein data. Database (Oxford) (2011) 11.43

GenBank. Nucleic Acids Res (2009) 11.11

Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus. PLoS Genet (2008) 3.23

The increase in the prevalence of asthma and allergy: food for thought. Nat Rev Immunol (2006) 1.74

SDAP: database and computational tools for allergenic proteins. Nucleic Acids Res (2003) 1.61

AlgPred: prediction of allergenic proteins and mapping of IgE epitopes. Nucleic Acids Res (2006) 1.59

Allergenicity prediction by protein sequence. FASEB J (2003) 1.41

Predicting allergenic proteins using wavelet transform. Bioinformatics (2004) 1.21

A practical algorithm for finding maximal exact matches in large sequence datasets using sparse suffix arrays. Bioinformatics (2009) 1.16

WebAllergen: a web server for predicting allergenic proteins. Bioinformatics (2005) 1.15

Allermatch, a webtool for the prediction of potential allergenicity according to current FAO/WHO Codex alimentarius guidelines. BMC Bioinformatics (2004) 1.14

AllerHunter: a SVM-pairwise system for assessment of allergenicity and allergic cross-reactivity in proteins. PLoS One (2009) 1.09

Allergen databases: current status and perspectives. Curr Allergy Asthma Rep (2009) 1.04

The property distance index PD predicts peptides that cross-react with IgE antibodies. Mol Immunol (2008) 0.99

Computer prediction of allergen proteins from sequence-derived protein structural and physicochemical properties. Mol Immunol (2006) 0.98

Bioinformatics and the allergy assessment of agricultural biotechnology products: industry practices and recommendations. Regul Toxicol Pharmacol (2011) 0.86

EVALLER: a web server for in silico assessment of potential protein allergenicity. Nucleic Acids Res (2007) 0.85

Computational detection of allergenic proteins attains a new level of accuracy with in silico variable-length peptide extraction and machine learning. Nucleic Acids Res (2006) 0.85

SORTALLER: predicting allergens using substantially optimized algorithm on allergen family featured peptides. Bioinformatics (2012) 0.82

Workshop proceedings: challenges and opportunities in evaluating protein allergenicity across biotechnology industries. Int J Toxicol (2013) 0.80

Genetically modified crops and allergenicity. Nat Immunol (2005) 0.79