Published in Nat Methods on January 19, 2014
In the right place at the right time: visualizing and understanding mRNA localization. Nat Rev Mol Cell Biol (2014) 1.72
Crowdsourcing the creation of image segmentation algorithms for connectomics. Front Neuroanat (2015) 1.11
Super-resolution microscopy approaches for live cell imaging. Biophys J (2014) 1.07
CellProfiler Tracer: exploring and validating high-throughput, time-lapse microscopy image data. BMC Bioinformatics (2015) 0.95
Inferring transient particle transport dynamics in live cells. Nat Methods (2015) 0.92
Computational Image Analysis Reveals Intrinsic Multigenerational Differences between Anterior and Posterior Cerebral Cortex Neural Progenitor Cells. Stem Cell Reports (2015) 0.91
Open source software for quantification of cell migration, protrusions, and fluorescence intensities. J Cell Biol (2015) 0.91
Electrically tunable lens speeds up 3D orbital tracking. Biomed Opt Express (2015) 0.90
Quantitative Aspects of Single Molecule Microscopy. IEEE Signal Process Mag (2015) 0.89
High-density single-particle tracking: quantifying molecule organization and dynamics at the nanoscale. Histochem Cell Biol (2014) 0.88
Extracting meaning from biological imaging data. Mol Biol Cell (2014) 0.86
Particle tracking in drug and gene delivery research: State-of-the-art applications and methods. Adv Drug Deliv Rev (2015) 0.86
BRCA2 diffuses as oligomeric clusters with RAD51 and changes mobility after DNA damage in live cells. J Cell Biol (2014) 0.85
Global linking of cell tracks using the viterbi algorithm. IEEE Trans Med Imaging (2014) 0.85
A Genome-wide RNAi Screen for Microtubule Bundle Formation and Lysosome Motility Regulation in Drosophila S2 Cells. Cell Rep (2016) 0.84
LEVER: software tools for segmentation, tracking and lineaging of proliferating cells. Bioinformatics (2016) 0.82
Diffusion Tensor Analysis by Two-Dimensional Pair Correlation of Fluorescence Fluctuations in Cells. Biophys J (2016) 0.80
Ligand-induced dynamics of neurotrophin receptors investigated by single-molecule imaging approaches. Int J Mol Sci (2015) 0.80
A neuronal network of mitochondrial dynamics regulates metastasis. Nat Commun (2016) 0.79
A particle tracking meet. Nat Methods (2014) 0.79
Directional reversals enable Myxococcus xanthus cells to produce collective one-dimensional streams during fruiting-body formation. J R Soc Interface (2015) 0.79
Fine spatiotemporal activity in contracting myometrium revealed by motion-corrected calcium imaging. J Physiol (2014) 0.79
Automated single particle detection and tracking for large microscopy datasets. R Soc Open Sci (2016) 0.79
Inferring Latent States and Refining Force Estimates via Hierarchical Dirichlet Process Modeling in Single Particle Tracking Experiments. PLoS One (2015) 0.79
Minimizing biases associated with tracking analysis of submicron particles in heterogeneous biological fluids. J Control Release (2015) 0.78
Genetically targeted single-channel optical recording reveals multiple Orai1 gating states and oscillations in calcium influx. Proc Natl Acad Sci U S A (2015) 0.77
Imagining the future of bioimage analysis. Nat Biotechnol (2016) 0.77
Cell-surface translational dynamics of nicotinic acetylcholine receptors. Front Synaptic Neurosci (2014) 0.77
From single molecules to life: microscopy at the nanoscale. Anal Bioanal Chem (2016) 0.76
Internal strain drives spontaneous periodic buckling in collagen and regulates remodeling. Proc Natl Acad Sci U S A (2016) 0.76
Single-Cell and Single-Molecule Analysis of Gene Expression Regulation. Annu Rev Genet (2016) 0.76
A simple method for imaging axonal transport in aging neurons using the adult Drosophila wing. Nat Protoc (2016) 0.76
Charge-dependent transport switching of single molecular ions in a weak polyelectrolyte multilayer. Langmuir (2014) 0.76
Localized movement and morphology of UBF1-positive nucleolar regions are changed by γ-irradiation in G2 phase of the cell cycle. Nucleus (2015) 0.76
Automated measurement of fast mitochondrial transport in neurons. Front Cell Neurosci (2015) 0.76
Class XI Myosins Move Specific Organelles in Pollen Tubes and Are Required for Normal Fertility and Pollen Tube Growth in Arabidopsis. Plant Physiol (2015) 0.76
Navigating the plant cell: intracellular transport logistics in the green kingdom. Mol Biol Cell (2015) 0.76
Single-Molecule Tracking and Its Application in Biomolecular Binding Detection. IEEE J Sel Top Quantum Electron (2016) 0.76
Improved Determination of Subnuclear Position Enabled by Three-Dimensional Membrane Reconstruction. Biophys J (2016) 0.76
Simulated single molecule microscopy with SMeagol. Bioinformatics (2016) 0.75
Robust cell tracking in epithelial tissues through identification of maximum common subgraphs. J R Soc Interface (2016) 0.75
Cell Tracking Accuracy Measurement Based on Comparison of Acyclic Oriented Graphs. PLoS One (2015) 0.75
Single-pixel interior filling function approach for detecting and correcting errors in particle tracking. Proc Natl Acad Sci U S A (2016) 0.75
Mobile Diagnostics Based on Motion? A Close Look at Motility Patterns in the Schistosome Life Cycle. Diagnostics (Basel) (2016) 0.75
Lineage mapper: A versatile cell and particle tracker. Sci Rep (2016) 0.75
Molecular approaches to chromatography using single molecule spectroscopy. Anal Chem (2014) 0.75
Live-cell single-molecule labeling and analysis of myosin motors with quantum dots. Mol Biol Cell (2016) 0.75
Current approaches to studying membrane organization. F1000Res (2015) 0.75
Inference of spatiotemporal effects on cellular state transitions from time-lapse microscopy. BMC Syst Biol (2015) 0.75
Single cell dynamic phenotyping. Sci Rep (2016) 0.75
Signal Transduction at the Single-Cell Level: Approaches to Study the Dynamic Nature of Signaling Networks. J Mol Biol (2016) 0.75
An end-to-end software solution for the analysis of high-throughput single-cell migration data. Sci Rep (2017) 0.75
Measuring Process Dynamics and Nuclear Migration for Clones of Neural Progenitor Cells. Comput Vis ECCV (2016) 0.75
Quantifying trophoblast migration: In vitro approaches to address in vivo situations. Cell Adh Migr (2015) 0.75
Fuzzy-Logic Based Detection and Characterization of Junctions and Terminations in Fluorescence Microscopy Images of Neurons. Neuroinformatics (2016) 0.75
TrackNTrace: A simple and extendable open-source framework for developing single-molecule localization and tracking algorithms. Sci Rep (2016) 0.75
Modulating motility of intracellular vesicles in cortical neurons with nanomagnetic forces on-chip. Lab Chip (2017) 0.75
Multiplexed, Tethered Particle Microscopy for Studies of DNA-Enzyme Dynamics. Methods Enzymol (2016) 0.75
The diffusive way out: Herpesviruses remodel the host nucleus, enabling capsids to access the inner nuclear membrane. Nucleus (2016) 0.75
Nano-scale measurement of biomolecules by optical microscopy and semiconductor nanoparticles. Front Physiol (2014) 0.75
A Primer on the Bayesian Approach to High-Density Single-Molecule Trajectories Analysis. Biophys J (2016) 0.75
Traxtile: Interactive editing of cell tracks in time-lapse images. Biotechniques (2015) 0.75
EB1 and EB3 regulate microtubule minus end organization and Golgi morphology. J Cell Biol (2017) 0.75
Micro-object motion tracking based on the probability hypothesis density particle tracker. J Math Biol (2015) 0.75
A new holistic 3D non-invasive analysis of cellular distribution and motility on fibroin-alginate microcarriers using light sheet fluorescent microscopy. PLoS One (2017) 0.75
Diatrack particle tracking software: review of applications and performance evaluation. Traffic (2017) 0.75
Fiji: an open-source platform for biological-image analysis. Nat Methods (2012) 56.92
Precise nanometer localization analysis for individual fluorescent probes. Biophys J (2002) 22.24
A guide to choosing fluorescent proteins. Nat Methods (2005) 18.55
The fluorescent toolbox for assessing protein location and function. Science (2006) 14.02
Single-particle tracking: applications to membrane dynamics. Annu Rev Biophys Biomol Struct (1997) 12.64
Icy: an open bioimage informatics platform for extended reproducible research. Nat Methods (2012) 10.59
Robust single-particle tracking in live-cell time-lapse sequences. Nat Methods (2008) 9.43
Rab conversion as a mechanism of progression from early to late endosomes. Cell (2005) 8.96
Quantitative comparison of algorithms for tracking single fluorescent particles. Biophys J (2001) 7.71
Tracking the ends: a dynamic protein network controls the fate of microtubule tips. Nat Rev Mol Cell Biol (2008) 7.15
Feature point tracking and trajectory analysis for video imaging in cell biology. J Struct Biol (2005) 6.49
Methods for cell and particle tracking. Methods Enzymol (2012) 4.80
Light microscopy techniques for live cell imaging. Science (2003) 4.77
Virus trafficking - learning from single-virus tracking. Nat Rev Microbiol (2007) 2.59
Multiple particle tracking in 3-D+t microscopy: method and application to the tracking of endocytosed quantum dots. IEEE Trans Image Process (2006) 2.48
A noniterative greedy algorithm for multiframe point correspondence. IEEE Trans Pattern Anal Mach Intell (2005) 2.22
Tracking single particles: a user-friendly quantitative evaluation. Phys Biol (2005) 2.13
Significantly improved precision of cell migration analysis in time-lapse video microscopy through use of a fully automated tracking system. BMC Cell Biol (2010) 2.04
Particle filtering for multiple object tracking in dynamic fluorescence microscopy images: application to microtubule growth analysis. IEEE Trans Med Imaging (2008) 2.03
Tracking in cell and developmental biology. Semin Cell Dev Biol (2009) 1.77
Vertebrate neural stem cell segmentation, tracking and lineaging with validation and editing. Nat Protoc (2011) 1.77
High-resolution quantification of focal adhesion spatiotemporal dynamics in living cells. PLoS One (2011) 1.63
Going for algorithm gold. Nat Methods (2008) 1.57
Advances in the speed and resolution of light microscopy. Curr Opin Neurobiol (2009) 1.49
Quantitative comparison of spot detection methods in fluorescence microscopy. IEEE Trans Med Imaging (2009) 1.42
Intracellular objects tracking. Eur J Cell Biol (2007) 1.37
Axonal transport analysis using Multitemporal Association Tracking. Int J Comput Biol Drug Des (2012) 1.34
Wanted: a positive control for anomalous subdiffusion. Biophys J (2012) 1.30
Single-particle tracking: connecting the dots. Nat Methods (2008) 1.28
Characterization of the motion of membrane proteins using high-speed atomic force microscopy. Nat Nanotechnol (2012) 1.22
Computational processing and analysis of dynamic fluorescence image data. Methods Cell Biol (2008) 1.21
Deterministic and probabilistic approaches for tracking virus particles in time-lapse fluorescence microscopy image sequences. Med Image Anal (2009) 1.12
Evaluation of methods for detection of fluorescence labeled subcellular objects in microscope images. BMC Bioinformatics (2010) 1.10
Understanding the phase contrast optics to restore artifact-free microscopy images for segmentation. Med Image Anal (2012) 1.06
ATP-dependent and independent functions of Rad54 in genome maintenance. J Cell Biol (2011) 1.02
Computational image analysis of cellular dynamics: a case study based on particle tracking. Cold Spring Harb Protoc (2009) 0.98
Software for drift compensation, particle tracking and particle analysis of high-speed atomic force microscopy image series. J Mol Recognit (2012) 0.94
Multiple objects tracking in fluorescence microscopy. J Math Biol (2008) 0.88
Tracking and quantitative analysis of dynamic movements of cells and particles. Cold Spring Harb Protoc (2010) 0.86
Single particle tracking of dynamically localizing TatA complexes in Streptomyces coelicolor. Biochem Biophys Res Commun (2013) 0.83
Tracking clathrin coated pits with a multiple hypothesis based method. Med Image Comput Comput Assist Interv (2010) 0.83
Morphological filter improve the efficiency of automated tracking of secretory vesicles with various dynamic properties. Microsc Res Tech (2009) 0.83
An automated tracking system to measure the dynamic properties of vesicles in living cells. Microsc Res Tech (2007) 0.83
Dynamic organization of chromatin assembly and transcription factories in living cells. Methods Cell Biol (2010) 0.82
Modeling of intracellular transport and compartmentation. Adv Biochem Eng Biotechnol (2012) 0.81
Identification of novel endophenaside antibiotics produced by Kitasatospora sp. MBT66. J Antibiot (Tokyo) (2015) 0.80