Published in Extremophiles on February 23, 2014
Archaeal extrachromosomal genetic elements. Microbiol Mol Biol Rev (2015) 0.94
Dark matter in archaeal genomes: a rich source of novel mobile elements, defense systems and secretory complexes. Extremophiles (2014) 0.92
Bipartite Network Analysis of the Archaeal Virosphere: Evolutionary Connections between Viruses and Capsidless Mobile Elements. J Virol (2016) 0.83
Unravelling the Role of the F55 Regulator in the Transition from Lysogeny to UV Induction of Sulfolobus Spindle-Shaped Virus 1. J Virol (2015) 0.77
A standardized protocol for the UV induction of Sulfolobus spindle-shaped virus 1. Extremophiles (2014) 0.76
A type III-B CRISPR-Cas effector complex mediating massive target DNA destruction. Nucleic Acids Res (2016) 0.75
Thermus thermophilus as source of thermozymes for biotechnological applications: homologous expression and biochemical characterization of an α-galactosidase. Microb Cell Fact (2017) 0.75
A novel type of polyhedral viruses infecting hyperthermophilic archaea. J Virol (2017) 0.75
Surprising similarities in structure comparison. Curr Opin Struct Biol (1996) 22.27
The integrase family of site-specific recombinases: regional similarities and global diversity. EMBO J (1986) 8.12
Identification of 86 candidates for small non-messenger RNAs from the archaeon Archaeoglobus fulgidus. Proc Natl Acad Sci U S A (2002) 7.04
The complete genome of the crenarchaeon Sulfolobus solfataricus P2. Proc Natl Acad Sci U S A (2001) 7.00
Archaebacteria. J Mol Evol (1978) 6.42
Identification of novel non-coding RNAs as potential antisense regulators in the archaeon Sulfolobus solfataricus. Mol Microbiol (2005) 4.52
The crystal structure of MarR, a regulator of multiple antibiotic resistance, at 2.3 A resolution. Nat Struct Biol (2001) 3.52
A single-base resolution map of an archaeal transcriptome. Genome Res (2009) 3.42
Transfer RNA genes frequently serve as integration sites for prokaryotic genetic elements. Nucleic Acids Res (1989) 3.35
Analysis of transcription in the archaebacterium Sulfolobus indicates that archaebacterial promoters are homologous to eukaryotic pol II promoters. Nucleic Acids Res (1988) 3.29
Chromosomal insertion sites for phages and plasmids. J Bacteriol (1992) 3.14
The ancient Virus World and evolution of cells. Biol Direct (2006) 3.06
Transcription of mouse rDNA terminates downstream of the 3' end of 28S RNA and involves interaction of factors with repeated sequences in the 3' spacer. Cell (1985) 3.03
What does structure tell us about virus evolution? Curr Opin Struct Biol (2005) 3.02
Archaebacteria and eukaryotes possess DNA-dependent RNA polymerases of a common type. EMBO J (1983) 2.89
Viruses of the Archaea: a unifying view. Nat Rev Microbiol (2006) 2.61
The particle SSV1 from the extremely thermophilic archaeon Sulfolobus is a virus: demonstration of infectivity and of transfection with viral DNA. Proc Natl Acad Sci U S A (1992) 2.53
Comparative evaluation of gene expression in archaebacteria. Eur J Biochem (1988) 2.36
SAV 1, a temperate u.v.-inducible DNA virus-like particle from the archaebacterium Sulfolobus acidocaldarius isolate B12. EMBO J (1984) 2.34
The origin of viruses and their possible roles in major evolutionary transitions. Virus Res (2006) 2.21
Complete nucleotide sequence of the virus SSV1 of the archaebacterium Sulfolobus shibatae. Virology (1991) 2.12
Antisense-RNA regulation and RNA interference. Biochim Biophys Acta (2002) 2.09
Evolutionary genomics of archaeal viruses: unique viral genomes in the third domain of life. Virus Res (2006) 2.02
Viruses of the extremely thermophilic archaeon Sulfolobus. Trends Microbiol (2001) 1.99
A plasmid in the archaebacterium Sulfolobus acidocaldarius. EMBO J (1982) 1.94
Viral biogeography revealed by signatures in Sulfolobus islandicus genomes. Environ Microbiol (2009) 1.93
Transcription termination in the archaebacterium Sulfolobus: signal structures and linkage to transcription initiation. Nucleic Acids Res (1988) 1.90
Genomics of bacterial and archaeal viruses: dynamics within the prokaryotic virosphere. Microbiol Mol Biol Rev (2011) 1.78
Viruses, plasmids and other genetic elements of thermophilic and hyperthermophilic Archaea. FEMS Microbiol Rev (1996) 1.72
An autonomously replicating transforming vector for Sulfolobus solfataricus. J Bacteriol (1998) 1.69
Do viruses form lineages across different domains of life? Res Microbiol (2003) 1.68
CRISPR-based immune systems of the Sulfolobales: complexity and diversity. Biochem Soc Trans (2011) 1.66
Viruses from extreme thermal environments. Proc Natl Acad Sci U S A (2001) 1.64
The archeoviruses. FEMS Microbiol Rev (2011) 1.62
Gene expression in archaebacteria: physical mapping of constitutive and UV-inducible transcripts from the Sulfolobus virus-like particle SSV1. Mol Gen Genet (1987) 1.55
Revisited gene regulation in bacteriophage lambda. Curr Opin Genet Dev (2005) 1.54
Comparative genomic analysis of hyperthermophilic archaeal Fuselloviridae viruses. J Virol (2004) 1.54
Genetic requirements for the function of the archaeal virus SSV1 in Sulfolobus solfataricus: construction and testing of viral shuttle vectors. Genetics (1999) 1.52
Production of recombinant and tagged proteins in the hyperthermophilic archaeon Sulfolobus solfataricus. Appl Environ Microbiol (2006) 1.52
A reporter gene system for the hyperthermophilic archaeon Sulfolobus solfataricus based on a selectable and integrative shuttle vector. Mol Microbiol (2003) 1.48
Prokaryote viruses studied by electron microscopy. Arch Virol (2012) 1.47
The genetic element pSSVx of the extremely thermophilic crenarchaeon Sulfolobus is a hybrid between a plasmid and a virus. Mol Microbiol (1999) 1.46
Genome analyses of Icelandic strains of Sulfolobus islandicus, model organisms for genetic and virus-host interaction studies. J Bacteriol (2011) 1.45
Evolution of the family of pRN plasmids and their integrase-mediated insertion into the chromosome of the crenarchaeon Sulfolobus solfataricus. J Mol Biol (2000) 1.43
Crystal structure of Enterococcus faecalis SlyA-like transcriptional factor. J Biol Chem (2003) 1.42
A hidden reservoir of integrative elements is the major source of recently acquired foreign genes and ORFans in archaeal and bacterial genomes. Genome Biol (2009) 1.41
SSV1-encoded site-specific recombination system in Sulfolobus shibatae. Mol Gen Genet (1993) 1.39
Transcriptome analysis of infection of the archaeon Sulfolobus solfataricus with Sulfolobus turreted icosahedral virus. J Virol (2008) 1.37
Identification of novel positive-strand RNA viruses by metagenomic analysis of archaea-dominated Yellowstone hot springs. J Virol (2012) 1.33
Expanding and understanding the genetic toolbox of the hyperthermophilic genus Sulfolobus. Biochem Soc Trans (2009) 1.32
Structural and functional studies of archaeal viruses. J Biol Chem (2009) 1.32
Occurrence of virus-like particles in the Dead Sea. Extremophiles (1997) 1.30
Remarkable morphological diversity of viruses and virus-like particles in hot terrestrial environments. Arch Virol (2002) 1.30
A novel type of replicative enzyme harbouring ATPase, primase and DNA polymerase activity. EMBO J (2003) 1.28
Four newly isolated fuselloviruses from extreme geothermal environments reveal unusual morphologies and a possible interviral recombination mechanism. Environ Microbiol (2009) 1.27
Archaeal integrative genetic elements and their impact on genome evolution. Res Microbiol (2002) 1.27
Relationships between fuselloviruses infecting the extremely thermophilic archaeon Sulfolobus: SSV1 and SSV2. Res Microbiol (2003) 1.26
The wonderful world of archaeal viruses. Annu Rev Microbiol (2013) 1.24
Gene capture in archaeal chromosomes. Nature (2001) 1.20
An ssDNA virus infecting archaea: a new lineage of viruses with a membrane envelope. Mol Microbiol (2009) 1.20
Elucidating the transcription cycle of the UV-inducible hyperthermophilic archaeal virus SSV1 by DNA microarrays. Virology (2007) 1.18
Global network of specific virus-host interactions in hypersaline environments. Environ Microbiol (2011) 1.18
Viruses of hyperthermophilic Crenarchaea. Trends Microbiol (2005) 1.16
Archaebacterial virus SSV1 encodes a putative DnaA-like protein. Nucleic Acids Res (1992) 1.14
Molecular analysis of pDL10 from Acidianus ambivalens reveals a family of related plasmids from extremely thermophilic and acidophilic archaea. Genetics (1999) 1.13
Diversity of virus-host systems in hypersaline Lake Retba, Senegal. Environ Microbiol (2010) 1.12
Mechanism of binding of the antisense and target RNAs involved in the regulation of IncB plasmid replication. J Bacteriol (1994) 1.12
Plasmid copy number control: an ever-growing story. Mol Microbiol (2000) 1.09
Characterization of the Sulfolobus host-SSV2 virus interaction. Extremophiles (2006) 1.09
Genetic analyses in the hyperthermophilic archaeon Sulfolobus islandicus. Biochem Soc Trans (2009) 1.09
Exceptionally diverse morphotypes and genomes of crenarchaeal hyperthermophilic viruses. Biochem Soc Trans (2004) 1.08
Control of ColE1 replication: low affinity specific binding of Rop (Rom) to RNAI and RNAII. EMBO J (1988) 1.08
Small RNAs in haloarchaea: identification, differential expression and biological function. RNA Biol (2009) 1.07
Virus-host interactions in salt lakes. Curr Opin Microbiol (2007) 1.07
Complete nucleotide sequence of the Sulfolobus islandicus multicopy plasmid pRN1. Plasmid (1996) 1.06
Hot crenarchaeal viruses reveal deep evolutionary connections. Nat Rev Microbiol (2006) 1.05
Cysteine usage in Sulfolobus spindle-shaped virus 1 and extension to hyperthermophilic viruses in general. Virology (2008) 1.05
Antisense RNAs in plasmids: control of replication and maintenance. Plasmid (2002) 1.04
Evidence for the horizontal transfer of an integrase gene from a fusellovirus to a pRN-like plasmid within a single strain of Sulfolobus and the implications for plasmid survival. Microbiology (2008) 1.03
Massive activation of archaeal defense genes during viral infection. J Virol (2013) 1.03
The SSV1 viral integrase is not essential. Virology (2006) 1.03
Genomics and genetics of Sulfolobus islandicus LAL14/1, a model hyperthermophilic archaeon. Open Biol (2013) 1.02
Structure of D-63 from sulfolobus spindle-shaped virus 1: surface properties of the dimeric four-helix bundle suggest an adaptor protein function. J Virol (2004) 1.01
Sulfolobus islandicus plasmids pRN1 and pRN2 share distant but common evolutionary ancestry. Extremophiles (1998) 1.01
Archaeal virus with exceptional virion architecture and the largest single-stranded DNA genome. Proc Natl Acad Sci U S A (2012) 1.01
Postcards from the edge: structural genomics of archaeal viruses. Adv Virus Res (2012) 0.98
Plasmids and viruses of the thermoacidophilic crenarchaeote Sulfolobus. Extremophiles (2006) 0.98
The major role of viruses in cellular evolution: facts and hypotheses. Curr Opin Virol (2013) 0.98
Evolutionary insights from studies on viruses of hyperthermophilic archaea. Res Microbiol (2003) 0.98
Development of a simvastatin selection marker for a hyperthermophilic acidophile, Sulfolobus islandicus. Appl Environ Microbiol (2011) 0.97
Cleavage properties of an archaeal site-specific recombinase, the SSV1 integrase. J Biol Chem (2002) 0.96
Thermoadaptation of a mesophilic hygromycin B phosphotransferase by directed evolution in hyperthermophilic Archaea: selection of a stable genetic marker for DNA transfer into Sulfolobus solfataricus. Extremophiles (2001) 0.95
Archaeal integrases and mechanisms of gene capture. Biochem Soc Trans (2004) 0.95
Crystal structure of F-93 from Sulfolobus spindle-shaped virus 1, a winged-helix DNA binding protein. J Virol (2004) 0.95
Novel insights into gene regulation of the rudivirus SIRV2 infecting Sulfolobus cells. RNA Biol (2013) 0.95
The legacy of Carl Woese and Wolfram Zillig: from phylogeny to landmark discoveries. Nat Rev Microbiol (2013) 0.94
Structural studies of E73 from a hyperthermophilic archaeal virus identify the "RH3" domain, an elaborated ribbon-helix-helix motif involved in DNA recognition. Biochemistry (2012) 0.94
Identification and molecular characterization of an endoglucanase gene, celS, from the extremely thermophilic archaeon Sulfolobus solfataricus. Extremophiles (2001) 0.94
A spreadable, non-integrative and high copy number shuttle vector for Sulfolobus solfataricus based on the genetic element pSSVx from Sulfolobus islandicus. Nucleic Acids Res (2006) 0.93
Dynamic properties of the Sulfolobus CRISPR/Cas and CRISPR/Cmr systems when challenged with vector-borne viral and plasmid genes and protospacers. Mol Microbiol (2010) 3.77
Genus-specific protein binding to the large clusters of DNA repeats (short regularly spaced repeats) present in Sulfolobus genomes. J Bacteriol (2003) 3.07
Structural and functional characterization of an archaeal clustered regularly interspaced short palindromic repeat (CRISPR)-associated complex for antiviral defense (CASCADE). J Biol Chem (2011) 2.86
The genome of Sulfolobus acidocaldarius, a model organism of the Crenarchaeota. J Bacteriol (2005) 2.31
Nucleotide sequence of pOLA52: a conjugative IncX1 plasmid from Escherichia coli which enables biofilm formation and multidrug efflux. Plasmid (2008) 1.87
Unmarked gene deletion and host-vector system for the hyperthermophilic crenarchaeon Sulfolobus islandicus. Extremophiles (2009) 1.75
An NGF-responsive element targets myo-inositol monophosphatase-1 mRNA to sympathetic neuron axons. Nat Neurosci (2010) 1.68
CRISPR-based immune systems of the Sulfolobales: complexity and diversity. Biochem Soc Trans (2011) 1.66
A novel interference mechanism by a type IIIB CRISPR-Cmr module in Sulfolobus. Mol Microbiol (2013) 1.58
Mobile elements in archaeal genomes. FEMS Microbiol Lett (2002) 1.51
Genome analyses of Icelandic strains of Sulfolobus islandicus, model organisms for genetic and virus-host interaction studies. J Bacteriol (2011) 1.45
Mammalian life-span determinant p66shcA mediates obesity-induced insulin resistance. Proc Natl Acad Sci U S A (2010) 1.30
Four newly isolated fuselloviruses from extreme geothermal environments reveal unusual morphologies and a possible interviral recombination mechanism. Environ Microbiol (2009) 1.27
Relationships between fuselloviruses infecting the extremely thermophilic archaeon Sulfolobus: SSV1 and SSV2. Res Microbiol (2003) 1.26
Sulfolobus tengchongensis spindle-shaped virus STSV1: virus-host interactions and genomic features. J Virol (2005) 1.26
An upstream activation element exerting differential transcriptional activation on an archaeal promoter. Mol Microbiol (2009) 1.24
The genome of Hyperthermus butylicus: a sulfur-reducing, peptide fermenting, neutrophilic Crenarchaeote growing up to 108 degrees C. Archaea (2007) 1.22
Modulation of CRISPR locus transcription by the repeat-binding protein Cbp1 in Sulfolobus. Nucleic Acids Res (2011) 1.16
Role of the life span determinant P66(shcA) in ethanol-induced liver damage. Lab Invest (2008) 1.15
Revealing the essentiality of multiple archaeal pcna genes using a mutant propagation assay based on an improved knockout method. Microbiology (2010) 1.11
Genetic manipulation in Sulfolobus islandicus and functional analysis of DNA repair genes. Biochem Soc Trans (2013) 1.10
Characterization of the Sulfolobus host-SSV2 virus interaction. Extremophiles (2006) 1.09
Abrogation of hepatocyte apoptosis and early appearance of liver dysplasia in ethanol-fed p53-deficient mice. Biochem Biophys Res Commun (2004) 1.07
Genomics and genetics of Sulfolobus islandicus LAL14/1, a model hyperthermophilic archaeon. Open Biol (2013) 1.02
Genomic analysis of Acidianus hospitalis W1 a host for studying crenarchaeal virus and plasmid life cycles. Extremophiles (2011) 1.00
Specificity and function of archaeal DNA replication initiator proteins. Cell Rep (2013) 0.99
Sulfolobus turreted icosahedral virus c92 protein responsible for the formation of pyramid-like cellular lysis structures. J Virol (2011) 0.98
Mitochondrial superoxide dismutase: a promising target for new anticancer therapies. Curr Med Chem (2004) 0.98
Development of a simvastatin selection marker for a hyperthermophilic acidophile, Sulfolobus islandicus. Appl Environ Microbiol (2011) 0.97
Characterization and functional complementation of a nonlethal deletion in the chromosome of a beta-glycosidase mutant of Sulfolobus solfataricus. J Bacteriol (2003) 0.97
A carboxylesterase from the hyperthermophilic archaeon Sulfolobus solfataricus: cloning of the gene, characterization of the protein. Gene (2002) 0.97
Genetic determinants of PAM-dependent DNA targeting and pre-crRNA processing in Sulfolobus islandicus. RNA Biol (2013) 0.96
A synthetic arabinose-inducible promoter confers high levels of recombinant protein expression in hyperthermophilic archaeon Sulfolobus islandicus. Appl Environ Microbiol (2012) 0.96
Key role of cysteine residues in catalysis and subcellular localization of sulfur oxygenase-reductase of Acidianus tengchongensis. Appl Environ Microbiol (2005) 0.95
Novel insights into gene regulation of the rudivirus SIRV2 infecting Sulfolobus cells. RNA Biol (2013) 0.95
MarR-like transcriptional regulator involved in detoxification of aromatic compounds in Sulfolobus solfataricus. J Bacteriol (2007) 0.94
Transcriptional regulation of the gene encoding an alcohol dehydrogenase in the archaeon Sulfolobus solfataricus involves multiple factors and control elements. J Bacteriol (2003) 0.94
A spreadable, non-integrative and high copy number shuttle vector for Sulfolobus solfataricus based on the genetic element pSSVx from Sulfolobus islandicus. Nucleic Acids Res (2006) 0.93
A novel Sulfolobus non-conjugative extrachromosomal genetic element capable of integration into the host genome and spreading in the presence of a fusellovirus. Virology (2007) 0.93
pIT3, a cryptic plasmid isolated from the hyperthermophilic crenarchaeon Sulfolobus solfataricus IT3. Plasmid (2006) 0.92
Identification and autonomous replication capability of a chromosomal replication origin from the archaeon Sulfolobus solfataricus. Extremophiles (2004) 0.91
Nutrient withdrawal rescues growth factor-deprived cells from mTOR-dependent damage. Aging (Albany NY) (2010) 0.91
A putative ABC transporter is involved in negative regulation of biofilm formation by Listeria monocytogenes. Appl Environ Microbiol (2008) 0.91
Bilirubin as an endogenous modulator of neurotrophin redox signaling. J Neurosci Res (2008) 0.90
Epigenetic modulation of adult hippocampal neurogenesis by extremely low-frequency electromagnetic fields. Mol Neurobiol (2014) 0.89
A novel single-tailed fusiform Sulfolobus virus STSV2 infecting model Sulfolobus species. Extremophiles (2013) 0.89
Novel RepA-MCM proteins encoded in plasmids pTAU4, pORA1 and pTIK4 from Sulfolobus neozealandicus. Archaea (2005) 0.88
Cellulose degradation by Sulfolobus solfataricus requires a cell-anchored endo-β-1-4-glucanase. J Bacteriol (2012) 0.88
Archaeal promoter architecture and mechanism of gene activation. Biochem Soc Trans (2011) 0.86
Phenotypic, proteomic, and genomic characterization of a putative ABC-transporter permease involved in Listeria monocytogenes biofilm formation. Foodborne Pathog Dis (2011) 0.86
A new archaeal beta-glycosidase from Sulfolobus solfataricus: seeding a novel retaining beta-glycan-specific glycoside hydrolase family along with the human non-lysosomal glucosylceramidase GBA2. J Biol Chem (2010) 0.86
Identification and characterization of a novel bacterial sulfite oxidase with no heme binding domain from Deinococcus radiodurans. J Bacteriol (2006) 0.86
Extremophiles 2002. J Bacteriol (2003) 0.84
Exceptional thermal stability and organic solvent tolerance of an esterase expressed from a thermophilic host. Appl Microbiol Biotechnol (2011) 0.84
Dissection of the functional domains of an archaeal Holliday junction helicase. DNA Repair (Amst) (2011) 0.82
A novel thermostable sulfite oxidase from Thermus thermophilus: characterization of the enzyme, gene cloning and expression in Escherichia coli. Extremophiles (2006) 0.82
Outside the unusual cell wall of the hyperthermophilic archaeon Aeropyrum pernix K1. Mol Cell Proteomics (2009) 0.82
C68 from the Sulfolobus islandicus plasmid-virus pSSVx is a novel member of the AbrB-like transcription factor family. Biochem J (2011) 0.82
Gene cloning and expression in Escherichia coli of a bi-functional beta-D-xylosidase/alpha-L-arabinosidase from Sulfolobus solfataricus involved in xylan degradation. Extremophiles (2006) 0.81
Host and viral transcriptional regulators in Sulfolobus: an overview. Extremophiles (2013) 0.81
Molecular cloning of a novel bioH gene from an environmental metagenome encoding a carboxylesterase with exceptional tolerance to organic solvents. BMC Biotechnol (2013) 0.81
Characterization of pMC11, a plasmid with dual origins of replication isolated from Lactobacillus casei MCJ and construction of shuttle vectors with each replicon. Appl Microbiol Biotechnol (2014) 0.80
Biochemical properties of a novel and highly thermostable bacterial α-carbonic anhydrase from Sulfurihydrogenibium yellowstonense YO3AOP1. J Enzyme Inhib Med Chem (2012) 0.80
Genetic analysis of the Holliday junction resolvases Hje and Hjc in Sulfolobus islandicus. Extremophiles (2015) 0.79
Smaller, hungrier mice. Science (2006) 0.79
Transcriptional analysis of the genetic element pSSVx: differential and temporal regulation of gene expression reveals correlation between transcription and replication. J Bacteriol (2007) 0.79
Transcription termination in the plasmid/virus hybrid pSSVx from Sulfolobus islandicus. Extremophiles (2010) 0.79
Transcriptomic analysis of the SSV2 infection of Sulfolobus solfataricus with and without the integrative plasmid pSSVi. Virology (2013) 0.78
Deletion of the topoisomerase III gene in the hyperthermophilic archaeon Sulfolobus islandicus results in slow growth and defects in cell cycle control. J Genet Genomics (2011) 0.78
An archaeal protein evolutionarily conserved in prokaryotes is a zinc-dependent metalloprotease. Biosci Rep (2012) 0.77
p66(ShcA): linking mammalian longevity with obesity-induced insulin resistance. Vitam Horm (2013) 0.77
Identification of a GDP-mannose pyrophosphorylase gene from Sulfolobus solfataricus. Gene (2004) 0.75
A novel carboxyl-terminal protease derived from Paenibacillus lautus CHN26 exhibiting high activities at multiple sites of substrates. BMC Biotechnol (2013) 0.75