Leukocyte-adjusted epigenome-wide association studies of blood from solid tumor patients.

PubWeight™: 0.82‹?›

🔗 View Article (PMC 4065186)

Published in Epigenetics on March 26, 2014

Authors

Scott M Langevin1, E Andres Houseman2, William P Accomando3, Devin C Koestler4, Brock C Christensen5, Heather H Nelson6, Margaret R Karagas4, Carmen J Marsit5, John K Wiencke7, Karl T Kelsey8

Author Affiliations

1: Department of Environmental Health; University of Cincinnati College of Medicine; Cincinnati, OH USA; Department of Epidemiology; Brown University; Providence, RI USA.
2: Department of Biostatistics; Oregon State University College of Public Health and Human Sciences; Corvallis, OR USA.
3: Department of Pathology & Laboratory Medicine; Brown University; Providence, RI USA.
4: Department of Community and Family Medicine; Section of Biostatistics and Epidemiology; Dartmouth Medical School; Lebanon, NH USA.
5: Department of Community and Family Medicine; Section of Biostatistics and Epidemiology; Dartmouth Medical School; Lebanon, NH USA; Department of Pharmacology and Toxicology; Dartmouth Medical School; Lebanon, NH USA.
6: Division of Epidemiology and Community Health; University of Minnesota Masonic Cancer Center; Minneapolis, MN USA.
7: Department of Neurological Surgery; University of California San Francisco; San Francisco, CA USA.
8: Department of Epidemiology; Brown University; Providence, RI USA; Department of Pathology & Laboratory Medicine; Brown University; Providence, RI USA.

Articles cited by this

DNA methylation arrays as surrogate measures of cell mixture distribution. BMC Bioinformatics (2012) 9.31

Initial impact of the sequencing of the human genome. Nature (2011) 9.18

Epigenome-wide association studies for common human diseases. Nat Rev Genet (2011) 7.96

Cancer epigenetics: from mechanism to therapy. Cell (2012) 7.74

Aging and environmental exposures alter tissue-specific DNA methylation dependent upon CpG island context. PLoS Genet (2009) 7.07

Epigenome-wide association data implicate DNA methylation as an intermediary of genetic risk in rheumatoid arthritis. Nat Biotechnol (2013) 5.89

Differential DNA methylation in purified human blood cells: implications for cell lineage and studies on disease susceptibility. PLoS One (2012) 5.03

Epigenetics and the environment: emerging patterns and implications. Nat Rev Genet (2012) 4.04

An epigenetic signature in peripheral blood predicts active ovarian cancer. PLoS One (2009) 3.33

A DAP12-mediated pathway regulates expression of CC chemokine receptor 7 and maturation of human dendritic cells. J Exp Med (2001) 3.18

Quantitative DNA methylation analysis of FOXP3 as a new method for counting regulatory T cells in peripheral blood and solid tissue. Cancer Res (2009) 2.75

A recent perspective on alcohol, immunity, and host defense. Alcohol Clin Exp Res (2008) 2.50

Stella is a maternal effect gene required for normal early development in mice. Curr Biol (2003) 2.38

Design of an epidemiologic study of drinking water arsenic exposure and skin and bladder cancer risk in a U.S. population. Environ Health Perspect (1998) 2.22

Complete blood count reference interval diagrams derived from NHANES III: stratification by age, sex, and race. Lab Hematol (2004) 2.13

HPV antibody detection by ELISA with capsid protein L1 fused to glutathione S-transferase. J Virol Methods (2002) 1.97

Close relationships, inflammation, and health. Neurosci Biobehav Rev (2009) 1.94

DNA methylation array analysis identifies profiles of blood-derived DNA methylation associated with bladder cancer. J Clin Oncol (2011) 1.92

Detection of circulating urothelial cancer cells in the blood using the CellSearch System. Cancer (2007) 1.91

Blood-based profiles of DNA methylation predict the underlying distribution of cell types: a validation analysis. Epigenetics (2013) 1.79

Cigarette smoking and innate immunity. Inflamm Res (2008) 1.78

Peripheral blood immune cell methylation profiles are associated with nonhematopoietic cancers. Cancer Epidemiol Biomarkers Prev (2012) 1.76

Epigenotyping in peripheral blood cell DNA and breast cancer risk: a proof of principle study. PLoS One (2008) 1.75

The influence of sex and gender on the immune response. Autoimmun Rev (2011) 1.71

Epigenetics of haematopoietic cell development. Nat Rev Immunol (2011) 1.58

Leukocyte DNA methylation signature differentiates pancreatic cancer patients from healthy controls. PLoS One (2011) 1.55

Lymphocyte numbers and subsets in the human blood. Do they mirror the situation in all organs? Immunol Lett (2006) 1.49

Peripheral blood DNA methylation profiles are indicative of head and neck squamous cell carcinoma: an epigenome-wide association study. Epigenetics (2012) 1.35

Epigenome-wide association study of breast cancer using prospectively collected sister study samples. J Natl Cancer Inst (2013) 1.35

Quantitation of circulating tumor cells in blood samples from ovarian and prostate cancer patients using tumor-specific fluorescent ligands. Int J Cancer (2008) 1.34

Differences in smoking associated DNA methylation patterns in South Asians and Europeans. Clin Epigenetics (2014) 1.33

Antibodies against early proteins of human papillomaviruses as diagnostic markers for invasive cervical cancer. J Clin Microbiol (1998) 1.28

Clinical significance of circulating tumor cells detected by an invasion assay in peripheral blood of patients with ovarian cancer. Gynecol Oncol (2008) 1.27

A global DNA methylation and gene expression analysis of early human B-cell development reveals a demethylation signature and transcription factor network. Nucleic Acids Res (2012) 1.21

Fat: a matter of disturbance for the immune system. World J Gastroenterol (2010) 1.13

Methylation markers for small cell lung cancer in peripheral blood leukocyte DNA. J Thorac Oncol (2010) 1.12

Selenium and risk of bladder cancer: a population-based case-control study. Cancer Prev Res (Phila) (2009) 1.09

Detection of circulating tumor cells in patients with urothelial cancer. Ann Oncol (2008) 1.08

Decreased NK cells in patients with head and neck cancer determined in archival DNA. Clin Cancer Res (2012) 1.06

Detection of circulating tumor cells in metastatic and clinically localized urothelial carcinoma. Urology (2011) 1.06

Distinctive DNA methylation patterns of cell-free plasma DNA in women with malignant ovarian tumors. Gynecol Oncol (2010) 1.03

Smoking modifies the relationship between XRCC1 haplotypes and HPV16-negative head and neck squamous cell carcinoma. Int J Cancer (2009) 1.02

Epigenomics in environmental health. Front Genet (2011) 1.02

DNA methylation patterns in blood of patients with colorectal cancer and adenomatous colorectal polyps. Int J Cancer (2011) 0.99

DNA methylation profiling of transcription factor genes in normal lymphocyte development and lymphomas. Int J Biochem Cell Biol (2007) 0.99

Molecular profiling and prognostic relevance of circulating tumor cells in the blood of ovarian cancer patients at primary diagnosis and after platinum-based chemotherapy. Int J Gynecol Cancer (2011) 0.98

Immunomagnetic quantification of circulating tumor cells in patients with urothelial cancer. Int J Urol (2010) 0.97

Genome-wide association studies of cancer predisposition. Hematol Oncol Clin North Am (2010) 0.97

Perioperative search for circulating tumor cells in patients undergoing radical cystectomy for bladder cancer. Eur J Med Res (2009) 0.95

Long term survival following the detection of circulating tumour cells in head and neck squamous cell carcinoma. BMC Cancer (2009) 0.95

Molecular characterization of circulating tumor cells in patients with ovarian cancer improves their prognostic significance -- a study of the OVCAD consortium. Gynecol Oncol (2012) 0.95

Down-regulated expression of SERPIN genes located on chromosome 18q21 in oral squamous cell carcinomas. Oncol Rep (2010) 0.93

The presence of circulating tumor cells (CTCs) correlates with lymph node metastasis in nonresectable squamous cell carcinoma of the head and neck region (SCCHN). Ann Oncol (2011) 0.92

Evaluation of an 8-color flow cytometric reference method for white blood cell differential enumeration. Cytometry B Clin Cytom (2010) 0.92

Epigenetic biomarkers of T-cells in human glioma. Epigenetics (2012) 0.92

Circulating tumor-derived DNA may permit the early diagnosis of head and neck squamous cell carcinomas. Int J Cancer (2001) 0.89

Total nucleated cell differential for blood and bone marrow using a single tube in a five-color flow cytometer. Cytometry B Clin Cytom (2008) 0.88

Detection of circulating tumor cells in bladder cancer patients. Cancer Treat Rev (2008) 0.86

Toward a reference method for leukocyte differential counts in blood: comparison of three flow cytometric candidate methods. Cytometry A (2012) 0.85

Epithelial cells in the peripheral blood of patients with cancer of the head and neck: incidence, detection and possible clinical significance. Radiother Oncol (2001) 0.82

Leukoflow: multiparameter extended white blood cell differentiation for routine analysis by flow cytometry. Cytometry A (2011) 0.81

Molecular staging of bladder cancer with RT-PCR assay for CK20 in peripheral blood, bone marrow and lymph nodes: comparison with standard histological staging. Anticancer Res (2006) 0.80