Published in Front Immunol on September 05, 2014
A Cohort Analysis Study of Intestinal Flora in Infants | NCT03396198
Microbial Diversity of Small Bowel Stoma Effluent and Colonic Faeces | NCT03590418
Gut bacteria are rarely shared by co-hospitalized premature infants, regardless of necrotizing enterocolitis development. Elife (2015) 1.72
Natural history of the infant gut microbiome and impact of antibiotic treatment on bacterial strain diversity and stability. Sci Transl Med (2016) 1.14
Exploring the role of environmental enteropathy in malnutrition, infant development and oral vaccine response. Philos Trans R Soc Lond B Biol Sci (2015) 1.02
Diversity and composition of the adult fecal microbiome associated with history of cesarean birth or appendectomy: Analysis of the American Gut Project. EBioMedicine (2014) 0.95
Early-Life Events, Including Mode of Delivery and Type of Feeding, Siblings and Gender, Shape the Developing Gut Microbiota. PLoS One (2016) 0.95
The Intestinal Microbiome and Estrogen Receptor-Positive Female Breast Cancer. J Natl Cancer Inst (2016) 0.94
The Infant Microbiome: Implications for Infant Health and Neurocognitive Development. Nurs Res (2015) 0.87
Allergy associations with the adult fecal microbiota: Analysis of the American Gut Project. EBioMedicine (2015) 0.87
An Introduction to the Avian Gut Microbiota and the Effects of Yeast-Based Prebiotic-Type Compounds as Potential Feed Additives. Front Vet Sci (2015) 0.85
The Significance of the Enteric Microbiome on the Development of Childhood Disease: A Review of Prebiotic and Probiotic Therapies in Disorders of Childhood. Clin Med Insights Pediatr (2016) 0.84
Maturation of Oral Microbiota in Children with or without Dental Caries. PLoS One (2015) 0.84
Development of the infant intestinal microbiome: A bird's eye view of a complex process. Birth Defects Res C Embryo Today (2015) 0.84
Navigating the Microbial Basis of Inflammatory Bowel Diseases: Seeing the Light at the End of the Tunnel. Gut Liver (2016) 0.84
Use of the Microbiome in the Practice of Epidemiology: A Primer on -Omic Technologies. Am J Epidemiol (2015) 0.83
From gut dysbiosis to altered brain function and mental illness: mechanisms and pathways. Mol Psychiatry (2016) 0.82
Mechanisms of inflammation-driven bacterial dysbiosis in the gut. Mucosal Immunol (2016) 0.81
Investigation of the association between the fecal microbiota and breast cancer in postmenopausal women: a population-based case-control pilot study. J Natl Cancer Inst (2015) 0.81
The respiratory microbiome: an underappreciated player in the human response to inhaled pollutants? Ann Epidemiol (2016) 0.81
Discordant temporal development of bacterial phyla and the emergence of core in the fecal microbiota of young children. ISME J (2015) 0.80
A randomized synbiotic trial to prevent sepsis among infants in rural India. Nature (2017) 0.80
Developmental Regulation of Drug-Processing Genes in Livers of Germ-Free Mice. Toxicol Sci (2015) 0.80
Potential NICU Environmental Influences on the Neonate's Microbiome: A Systematic Review. Adv Neonatal Care (2015) 0.79
The hygiene hypothesis: current perspectives and future therapies. Immunotargets Ther (2015) 0.79
Harnessing the beneficial heterologous effects of vaccination. Nat Rev Immunol (2016) 0.79
Microbial interactions: ecology in a molecular perspective. Braz J Microbiol (2016) 0.79
Safety and acceptability of Lactobacillus reuteri DSM 17938 and Bifidobacterium longum subspecies infantis 35624 in Bangladeshi infants: a phase I randomized clinical trial. BMC Complement Altern Med (2016) 0.78
Genome of Bifidobacteria and Carbohydrate Metabolism. Korean J Food Sci Anim Resour (2015) 0.78
Effect of Saccharomyces boulardii and Mode of Delivery on the Early Development of the Gut Microbial Community in Preterm Infants. PLoS One (2016) 0.78
Necrotizing enterocolitis and preterm infant gut bacteria. Semin Fetal Neonatal Med (2016) 0.77
Use of Shotgun Metagenome Sequencing To Detect Fecal Colonization with Multidrug-Resistant Bacteria in Children. J Clin Microbiol (2016) 0.77
Understanding the ontogeny of the immune system to promote immune-mediated health for life. Front Immunol (2015) 0.77
Preventing mental health problems in offspring by targeting dietary intake of pregnant women. BMC Med (2014) 0.77
Commensal Streptococcus salivarius Modulates PPARγ Transcriptional Activity in Human Intestinal Epithelial Cells. PLoS One (2015) 0.77
New Insights into the Classification and Integration Specificity of Streptococcus Integrative Conjugative Elements through Extensive Genome Exploration. Front Microbiol (2016) 0.77
Homeostatic Immunity and the Microbiota. Immunity (2017) 0.77
Bio-behavioral synchrony promotes the development of conceptualized emotions. Curr Opin Psychol (2017) 0.77
Impact of Early-Life Exposures to Infections, Antibiotics, and Vaccines on Perinatal and Long-term Health and Disease. Front Immunol (2017) 0.76
High Frequency and Diversity of Antimicrobial Activities Produced by Nasal Staphylococcus Strains against Bacterial Competitors. PLoS Pathog (2016) 0.76
Building a Beneficial Microbiome from Birth. Adv Nutr (2016) 0.76
A humanized microbiota mouse model of ovalbumin-induced lung inflammation. Gut Microbes (2016) 0.76
Early-life enteric infections: relation between chronic systemic inflammation and poor cognition in children. Nutr Rev (2016) 0.76
The changing face of asthma and its relation with microbes. Trends Microbiol (2015) 0.76
Lower Neighborhood Socioeconomic Status Associated with Reduced Diversity of the Colonic Microbiota in Healthy Adults. PLoS One (2016) 0.76
How nutrition and the maternal microbiota shape the neonatal immune system. Nat Rev Immunol (2017) 0.76
Intestinal microbiome in children with severe and complicated acute viral gastroenteritis. Sci Rep (2017) 0.75
Cell-Free Spent Media Obtained from Bifidobacterium bifidum and Bifidobacterium crudilactis Grown in Media Supplemented with 3'-Sialyllactose Modulate Virulence Gene Expression in Escherichia coli O157:H7 and Salmonella Typhimurium. Front Microbiol (2016) 0.75
Associations between EBV and CMV Seropositivity, Early Exposures, and Gut Microbiota in a Prospective Birth Cohort: A 10-Year Follow-up. Front Pediatr (2016) 0.75
Host genetic variation in mucosal immunity pathways influences the upper airway microbiome. Microbiome (2017) 0.75
Intestinal microbiota composition after antibiotic treatment in early life: the INCA study. BMC Pediatr (2015) 0.75
Comparison of faecal microbiota in Blastocystis-positive and Blastocystis-negative irritable bowel syndrome patients. Microbiome (2016) 0.75
Xenobiotic Metabolism and Gut Microbiomes. PLoS One (2016) 0.75
Colonization and Succession within the Human Gut Microbiome by Archaea, Bacteria, and Microeukaryotes during the First Year of Life. Front Microbiol (2017) 0.75
The microbiome in asthma. Curr Opin Pediatr (2016) 0.75
Milk Fat Globule Membrane Supplementation in Formula Modulates the Neonatal Gut Microbiome and Normalizes Intestinal Development. Sci Rep (2017) 0.75
Registered report: Fusobacterium nucleatum infection is prevalent in human colorectal carcinoma. Elife (2016) 0.75
Correlation between early-life regulation of the immune system by microbiota and allergy development. J Allergy Clin Immunol (2017) 0.75
The ecological community of commensal, symbiotic, and pathogenic gastrointestinal microorganisms - an appraisal. Clin Exp Gastroenterol (2017) 0.75
The Impact of the Gut Microbiota on Humoral Immunity to Pathogens and Vaccination in Early Infancy. PLoS Pathog (2016) 0.75
Gut Microbiome and Kidney Disease in Pediatrics: Does Connection Exist? Front Microbiol (2016) 0.75
Fatty acid composition and phospholipid types used in infant formulas modifies the establishment of human gut bacteria in germ-free mice. Sci Rep (2017) 0.75
Enterococcus faecalis readily colonizes the entire gastrointestinal tract and forms biofilms in a germ-free mouse model. Virulence (2016) 0.75
CauseMap: fast inference of causality from complex time series. PeerJ (2015) 0.75
Unraveling the Differences between Gram-Positive and Gram-Negative Probiotics in Modulating Protective Immunity to Enteric Infections. Front Immunol (2017) 0.75
Early life antibiotic exposure affects pancreatic islet development and metabolic regulation. Sci Rep (2017) 0.75
Fecal Microbiota and Diet of Children with Chronic Constipation. Int J Pediatr (2016) 0.75
A global perspective on the influence of environmental exposures on the nervous system. Nature (2015) 0.75
Different immunological responses to early-life antibiotic exposure affecting autoimmune diabetes development in NOD mice. J Autoimmun (2016) 0.75
Structural dissection of a complex Bacteroides ovatus gene locus conferring xyloglucan metabolism in the human gut. Open Biol (2016) 0.75
Effect of probiotics on digestibility and immunity in infants: A study protocol for a randomized controlled trial. Medicine (Baltimore) (2017) 0.75
Evaluation of Fecal Microbiota Transfer as Treatment for Postweaning Diarrhea in Research-Colony Puppies. J Am Assoc Lab Anim Sci (2016) 0.75
Gut microbiota: Neonatal gut microbiota induces lung immunity against pneumonia. Nat Rev Gastroenterol Hepatol (2017) 0.75
Network analysis of temporal functionalities of the gut induced by perturbations in new-born piglets. BMC Genomics (2015) 0.75
Impact of birth weight and postnatal diet on the gut microbiota of young adult guinea pigs. PeerJ (2017) 0.75
Intestinal microbiota in pediatric patients with end stage renal disease: a Midwest Pediatric Nephrology Consortium study. Microbiome (2016) 0.75
First Foods and Gut Microbes. Front Microbiol (2017) 0.75
Lactobacillus johnsonii supplementation attenuates respiratory viral infection via metabolic reprogramming and immune cell modulation. Mucosal Immunol (2017) 0.75
Development of the cutaneous microbiome in the preterm infant: A prospective longitudinal study. PLoS One (2017) 0.75
The Bacterial Ecosystem of Mother's Milk and Infant's Mouth and Gut. Front Microbiol (2017) 0.75
Early-Life Host-Microbiome Interphase: The Key Frontier for Immune Development. Front Pediatr (2017) 0.75
Microbiome-mediated neutrophil recruitment via CXCR2 and protection from amebic colitis. PLoS Pathog (2017) 0.75
Cross Talk: The Microbiota and Neurodevelopmental Disorders. Front Neurosci (2017) 0.75
Microbial Metabolic Networks at the Mucus Layer Lead to Diet-Independent Butyrate and Vitamin B12 Production by Intestinal Symbionts. MBio (2017) 0.75
Impact of environmental microbiota on human microbiota of workers in academic mouse research facilities: An observational study. PLoS One (2017) 0.75
Cxcr2 signaling and the microbiome suppress inflammation, bile duct injury, and the phenotype of experimental biliary atresia. PLoS One (2017) 0.75
Macrophage dysfunction initiates colitis during weaning of infant mice lacking the interleukin-10 receptor. Elife (2017) 0.75
Maternal microbiota and antibodies as advocates of neonatal health. Gut Microbes (2017) 0.75
A core gut microbiome in obese and lean twins. Nature (2008) 52.30
Diversity of the human intestinal microbial flora. Science (2005) 49.64
An obesity-associated gut microbiome with increased capacity for energy harvest. Nature (2006) 44.35
SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Res (2007) 35.65
Structure, function and diversity of the healthy human microbiome. Nature (2012) 30.40
Recognition of commensal microflora by toll-like receptors is required for intestinal homeostasis. Cell (2004) 29.32
KEGG for representation and analysis of molecular networks involving diseases and drugs. Nucleic Acids Res (2009) 28.60
Bacterial community variation in human body habitats across space and time. Science (2009) 24.84
Enterotypes of the human gut microbiome. Nature (2011) 24.36
Human gut microbiome viewed across age and geography. Nature (2012) 19.31
Development of the human infant intestinal microbiota. PLoS Biol (2007) 18.91
Induction of colonic regulatory T cells by indigenous Clostridium species. Science (2010) 16.71
The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing. PLoS Biol (2008) 16.57
Hay fever, hygiene, and household size. BMJ (1989) 15.94
Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa. Proc Natl Acad Sci U S A (2010) 15.22
Faecalibacterium prausnitzii is an anti-inflammatory commensal bacterium identified by gut microbiota analysis of Crohn disease patients. Proc Natl Acad Sci U S A (2008) 14.18
Metabolic endotoxemia initiates obesity and insulin resistance. Diabetes (2007) 14.12
Metabolic syndrome and altered gut microbiota in mice lacking Toll-like receptor 5. Science (2010) 12.54
Increasing incidence and prevalence of the inflammatory bowel diseases with time, based on systematic review. Gastroenterology (2011) 12.09
A framework for human microbiome research. Nature (2012) 11.41
Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns. Proc Natl Acad Sci U S A (2010) 11.21
Diet rapidly and reproducibly alters the human gut microbiome. Nature (2013) 11.04
Reduced diversity of faecal microbiota in Crohn's disease revealed by a metagenomic approach. Gut (2005) 10.95
Interactions between the microbiota and the immune system. Science (2012) 10.45
Inflammatory mechanisms in obesity. Annu Rev Immunol (2011) 9.83
Succession of microbial consortia in the developing infant gut microbiome. Proc Natl Acad Sci U S A (2010) 9.57
Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers. Nucleic Acids Res (2008) 9.09
Diversity, stability and resilience of the human gut microbiota. Nature (2012) 9.09
The human oral microbiome. J Bacteriol (2010) 9.00
Gut microbiota from twins discordant for obesity modulate metabolism in mice. Science (2013) 8.81
The microbial metabolites, short-chain fatty acids, regulate colonic Treg cell homeostasis. Science (2013) 8.53
Human gut microbiota in obesity and after gastric bypass. Proc Natl Acad Sci U S A (2009) 8.25
Microbiota modulate behavioral and physiological abnormalities associated with neurodevelopmental disorders. Cell (2013) 8.11
Functional interactions between the gut microbiota and host metabolism. Nature (2012) 7.91
Genetics and pathogenesis of inflammatory bowel disease. Nature (2011) 7.79
Human nutrition, the gut microbiome and the immune system. Nature (2011) 7.77
The treatment-naive microbiome in new-onset Crohn's disease. Cell Host Microbe (2014) 7.43
Factors influencing the composition of the intestinal microbiota in early infancy. Pediatrics (2006) 7.40
Gut microbiomes of Malawian twin pairs discordant for kwashiorkor. Science (2013) 6.98
Necrotizing enterocolitis. N Engl J Med (2011) 6.88
Exposure to environmental microorganisms and childhood asthma. N Engl J Med (2011) 6.38
Antibiotics in early life alter the murine colonic microbiome and adiposity. Nature (2012) 6.37
Cross-talk between Akkermansia muciniphila and intestinal epithelium controls diet-induced obesity. Proc Natl Acad Sci U S A (2013) 5.88
Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment. Genome Biol (2012) 5.66
A pyrosequencing study in twins shows that gastrointestinal microbial profiles vary with inflammatory bowel disease phenotypes. Gastroenterology (2010) 5.29
The gut microbiota--masters of host development and physiology. Nat Rev Microbiol (2013) 5.25
The placenta harbors a unique microbiome. Sci Transl Med (2014) 5.10
Mind-altering microorganisms: the impact of the gut microbiota on brain and behaviour. Nat Rev Neurosci (2012) 4.95
Ingestion of Lactobacillus strain regulates emotional behavior and central GABA receptor expression in a mouse via the vagus nerve. Proc Natl Acad Sci U S A (2011) 4.91
Long-term relation between breastfeeding and development of atopy and asthma in children and young adults: a longitudinal study. Lancet (2002) 4.89
Antibiotics as part of the management of severe acute malnutrition. N Engl J Med (2013) 4.81
Unravelling the effects of the environment and host genotype on the gut microbiome. Nat Rev Microbiol (2011) 4.57
Microbiota-liberated host sugars facilitate post-antibiotic expansion of enteric pathogens. Nature (2013) 4.43
Lymphoid tissue genesis induced by commensals through NOD1 regulates intestinal homeostasis. Nature (2008) 4.42
Allergy and allergic diseases. First of two parts. N Engl J Med (2001) 4.33
Gut microbiota metabolism of dietary fiber influences allergic airway disease and hematopoiesis. Nat Med (2014) 4.29
Child undernutrition, tropical enteropathy, toilets, and handwashing. Lancet (2009) 4.25
Trends in mortality and morbidity for very low birth weight infants, 1991-1999. Pediatrics (2002) 4.24
Comparison of two next-generation sequencing technologies for resolving highly complex microbiota composition using tandem variable 16S rRNA gene regions. Nucleic Acids Res (2010) 4.17
Necrotising enterocolitis. Lancet (2006) 3.94
The gut microbiota in IBD. Nat Rev Gastroenterol Hepatol (2012) 3.88
Investigation of candidate division TM7, a recently recognized major lineage of the domain Bacteria with no known pure-culture representatives. Appl Environ Microbiol (2001) 3.77
Influence of the normal flora on mucosal morphology and cellular renewal in the ileum. A comparison of germ-free and conventional mice. Lab Invest (1963) 3.76
16S rRNA gene-based analysis of fecal microbiota from preterm infants with and without necrotizing enterocolitis. ISME J (2009) 3.75
Antibiotic-induced perturbations of the intestinal microbiota alter host susceptibility to enteric infection. Infect Immun (2008) 3.68
Use of axenic animals in studying the adaptation of mammals to their commensal intestinal microbiota. Semin Immunol (2006) 3.48
Bacterial diversity in the oral cavity of 10 healthy individuals. ISME J (2010) 3.39
Children with early-onset inflammatory bowel disease (IBD): analysis of a pediatric IBD consortium registry. J Pediatr (2005) 3.37
Experimental and analytical tools for studying the human microbiome. Nat Rev Genet (2011) 3.30
Monitoring bacterial community of human gut microbiota reveals an increase in Lactobacillus in obese patients and Methanogens in anorexic patients. PLoS One (2009) 3.18
Association between the use of antibiotics in the first year of life and pediatric inflammatory bowel disease. Am J Gastroenterol (2010) 3.12
Microbial prevalence, diversity and abundance in amniotic fluid during preterm labor: a molecular and culture-based investigation. PLoS One (2008) 3.01
Colonic microbiota signatures across five northern European countries. Appl Environ Microbiol (2005) 2.98
Intestinal microbial ecology in premature infants assessed with non-culture-based techniques. J Pediatr (2010) 2.93
An exclusively human milk-based diet is associated with a lower rate of necrotizing enterocolitis than a diet of human milk and bovine milk-based products. J Pediatr (2009) 2.89
Comparative meta-analysis of the effect of Lactobacillus species on weight gain in humans and animals. Microb Pathog (2012) 2.85
Control of pathogens and pathobionts by the gut microbiota. Nat Immunol (2013) 2.84
Malnutrition as an enteric infectious disease with long-term effects on child development. Nutr Rev (2008) 2.84
The roles of bacteria and TLR4 in rat and murine models of necrotizing enterocolitis. J Immunol (2006) 2.83
Early life antibiotic-driven changes in microbiota enhance susceptibility to allergic asthma. EMBO Rep (2012) 2.83
Fecal microbiota in premature infants prior to necrotizing enterocolitis. PLoS One (2011) 2.81
Helicobacter pylori infection prevents allergic asthma in mouse models through the induction of regulatory T cells. J Clin Invest (2011) 2.77
A critical role for TLR4 in the pathogenesis of necrotizing enterocolitis by modulating intestinal injury and repair. J Immunol (2007) 2.77
Establishment of the gut microbiota in Western infants. Acta Paediatr (2009) 2.74
Prevalence of bacteria of division TM7 in human subgingival plaque and their association with disease. Appl Environ Microbiol (2003) 2.72
Diversity of bifidobacteria within the infant gut microbiota. PLoS One (2012) 2.71
Microbial degradation of complex carbohydrates in the gut. Gut Microbes (2012) 2.51
Pyrosequencing study of fecal microflora of autistic and control children. Anaerobe (2010) 2.51
Short-term benefit from oral vancomycin treatment of regressive-onset autism. J Child Neurol (2000) 2.50
Antibiotic exposure in the newborn intensive care unit and the risk of necrotizing enterocolitis. J Pediatr (2011) 2.42
Mode and place of delivery, gastrointestinal microbiota, and their influence on asthma and atopy. J Allergy Clin Immunol (2011) 2.39
Meta-analyses of studies of the human microbiota. Genome Res (2013) 2.35
Exploring the diversity of the bifidobacterial population in the human intestinal tract. Appl Environ Microbiol (2009) 2.34
Association between the use of antibiotics and new diagnoses of Crohn's disease and ulcerative colitis. Am J Gastroenterol (2011) 2.32
Environmental enteropathy: critical implications of a poorly understood condition. Trends Mol Med (2012) 2.29
The role of the intestinal microbiota in the development of atopic disorders. Allergy (2007) 2.27
Principles and clinical implications of the brain-gut-enteric microbiota axis. Nat Rev Gastroenterol Hepatol (2009) 2.24
Reduced incidence of Prevotella and other fermenters in intestinal microflora of autistic children. PLoS One (2013) 2.24
Antibiotic treatment alters the colonic mucus layer and predisposes the host to exacerbated Citrobacter rodentium-induced colitis. Infect Immun (2011) 2.24
Formula versus donor breast milk for feeding preterm or low birth weight infants. Cochrane Database Syst Rev (2014) 2.23