Published in BMC Genomics on December 03, 2014
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SMAR1 forms a ternary complex with p53-MDM2 and negatively regulates p53-mediated transcription. J Mol Biol (2009) 0.96
Integrated glycoproteomics demonstrates fucosylated serum paraoxonase 1 alterations in small cell lung cancer. Mol Cell Proteomics (2013) 0.96
Different effects of the probe summarization algorithms PLIER and RMA on high-level analysis of Affymetrix exon arrays. BMC Bioinformatics (2010) 0.94
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HSP70 and GRP78 induced by endothelin-1 pretreatment enhance tolerance to hypoxia in cultured neonatal rat cardiomyocytes. J Cardiovasc Pharmacol (2004) 0.89
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The zinc-binding protein chordc1 undergoes complex diurnal changes in mRNA expression during mouse brain development. Neurochem Res (2007) 0.84
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Heat shock proteins as danger signals for cancer detection. Front Oncol (2011) 0.83
An exploration of heat tolerance in mice utilizing mRNA and microRNA expression analysis. PLoS One (2013) 0.83
Heat-shock protein 70 binds to a novel sequence in 5' UTR of tumor suppressor SMAR1 and regulates its mRNA stability upon Prostaglandin A2 treatment. FEBS Lett (2010) 0.82
Delayed cytoprotection induced by hypoxic preconditioning in cultured neonatal rat cardiomyocytes: role of GRP78. Life Sci (2007) 0.81
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Intracellular localization of constitutive and inducible heat shock protein 70 in rat liver after in vivo heat stress. Mol Cell Biochem (2004) 0.80
A 3-D mathematical model to identify organ-specific risks in rats during thermal stress. J Appl Physiol (1985) (2013) 0.80
Tumor suppressor SMAR1 downregulates Cytokeratin 8 expression by displacing p53 from its cognate site. Int J Biochem Cell Biol (2008) 0.80
Hsp-72, a candidate prognostic indicator of heatstroke. Cell Stress Chaperones (2010) 0.80
TLR accessory molecule RP105 (CD180) is involved in post-interventional vascular remodeling and soluble RP105 modulates neointima formation. PLoS One (2013) 0.80
An unexpected intriguing effect of Toll-like receptor regulator RP105 (CD180) on atherosclerosis formation with alterations on B-cell activation. Arterioscler Thromb Vasc Biol (2013) 0.79
Differential accumulation of U14 snoRNA and hsc70 mRNA in Chinese hamster cells after exposure to various stress conditions. Cell Stress Chaperones (2002) 0.78
The pathology of cellular anti-stress mechanisms: a new frontier. Stress (2004) 0.77
Genomics and proteomics of heat acclimation. Front Biosci (Schol Ed) (2010) 0.77
Exercise, genetics, and blood pressure: focus on "physical exercise and blood pressure with reference to the angiotensinogen M235T polymorphism" and on "angiotensinogen M235T polymorphism associates with exercise hemodynamics in postmenopausal women". Physiol Genomics (2002) 0.76
Determining protein concentrations of the human ventricular proteome. Methods Mol Biol (2013) 0.76
Differential regulation of M3/6 (DUSP8) signaling complexes in response to arsenite-induced oxidative stress. Cell Signal (2012) 0.76
Developmental changes in DNA methylation of pollen mother cells of David lily during meiotic prophase I. Mol Biol (Mosk) (2010) 0.76
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DOVIS: an implementation for high-throughput virtual screening using AutoDock. BMC Bioinformatics (2008) 1.70
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KSR2 is an essential regulator of AMP kinase, energy expenditure, and insulin sensitivity. Cell Metab (2009) 1.53
DOVIS 2.0: an efficient and easy to use parallel virtual screening tool based on AutoDock 4.0. Chem Cent J (2008) 1.52
A new strategy to reduce allelic bias in RNA-Seq readmapping. Nucleic Acids Res (2012) 1.49
Central angiotensin II-enhanced splenic cytokine gene expression is mediated by the sympathetic nervous system. Am J Physiol Heart Circ Physiol (2005) 1.44
Correlation of quantitative light-induced fluorescence and optical coherence tomography applied for detection and quantification of early dental caries. J Biomed Opt (2003) 1.44
The use of thermoplastic impression materials to identify children and young adults. Pediatr Dent (2005) 1.39
Predicting subcutaneous glucose concentration in humans: data-driven glucose modeling. IEEE Trans Biomed Eng (2008) 1.34
Mathematical modeling research to support the development of automated insulin-delivery systems. J Diabetes Sci Technol (2009) 1.34
Integrated physiological mechanisms of exercise performance, adaptation, and maladaptation to heat stress. Compr Physiol (2011) 1.33
Sciatic nerve ligation-induced proliferation of spinal cord astrocytes is mediated by kappa opioid activation of p38 mitogen-activated protein kinase. J Neurosci (2007) 1.31
A high-throughput pipeline for the design of real-time PCR signatures. BMC Bioinformatics (2010) 1.27
Quantification of root caries using optical coherence tomography and microradiography: a correlational study. Oral Health Prev Dent (2004) 1.21
A high-throughput pipeline for designing microarray-based pathogen diagnostic assays. BMC Bioinformatics (2008) 1.20
AGeS: a software system for microbial genome sequence annotation. PLoS One (2011) 1.18
The development of PIPA: an integrated and automated pipeline for genome-wide protein function annotation. BMC Bioinformatics (2008) 1.17
Support vector machines with selective kernel scaling for protein classification and identification of key amino acid positions. Bioinformatics (2002) 1.16
Whole adult organism transcriptional profiling of acute metal exposures in male zebrafish. BMC Pharmacol Toxicol (2014) 1.13
Universal glucose models for predicting subcutaneous glucose concentration in humans. IEEE Trans Inf Technol Biomed (2009) 1.12
Oligonucleotide fingerprint identification for microarray-based pathogen diagnostic assays. Bioinformatics (2006) 1.08
Combat medical informatics: present and future. Proc AMIA Symp (2002) 1.05
Decision tool for the early diagnosis of trauma patient hypovolemia. J Biomed Inform (2008) 1.04
PathNet: a tool for pathway analysis using topological information. Source Code Biol Med (2012) 1.01
Error bounds for data-driven models of dynamical systems. Comput Biol Med (2006) 1.01
Modeling phenotypic metabolic adaptations of Mycobacterium tuberculosis H37Rv under hypoxia. PLoS Comput Biol (2012) 0.99
In silico microarray probe design for diagnosis of multiple pathogens. BMC Genomics (2008) 0.99
Influence of protein abundance on high-throughput protein-protein interaction detection. PLoS One (2009) 0.99
QuartetS: a fast and accurate algorithm for large-scale orthology detection. Nucleic Acids Res (2011) 0.98
A novel scoring approach for protein co-purification data reveals high interaction specificity. PLoS Comput Biol (2009) 0.98
Nuclear and nucleolar localization of 18-kDa fibroblast growth factor-2 is controlled by C-terminal signals. J Biol Chem (2004) 0.97
Computational model predicts effective delivery of 188-Re-labeled melanin-binding antibody to metastatic melanoma tumors with wide range of melanin concentrations. Melanoma Res (2007) 0.97
Metabolism of capsaicin by cytochrome P450 produces novel dehydrogenated metabolites and decreases cytotoxicity to lung and liver cells. Chem Res Toxicol (2003) 0.97
Development and analysis of an in vivo-compatible metabolic network of Mycobacterium tuberculosis. BMC Syst Biol (2010) 0.96
Update on mathematical modeling research to support the development of automated insulin delivery systems. J Diabetes Sci Technol (2010) 0.96
Randomized trial of a brief physiotherapy intervention compared with usual physiotherapy for neck pain patients: cost-effectiveness analysis. Int J Technol Assess Health Care (2006) 0.95
Heat stroke activates a stress-induced cytokine response in skeletal muscle. J Appl Physiol (1985) (2013) 0.95
Individualized performance prediction of sleep-deprived individuals with the two-process model. J Appl Physiol (1985) (2007) 0.95
Temporal trends in presentation for outpatient HIV medical care 2000-2010: implications for short-term mortality. J Gen Intern Med (2011) 0.94
A method for automatic identification of reliable heart rates calculated from ECG and PPG waveforms. J Am Med Inform Assoc (2006) 0.94
Can we improve the clinical utility of respiratory rate as a monitored vital sign? Shock (2009) 0.93
A systems biology framework for modeling metabolic enzyme inhibition of Mycobacterium tuberculosis. BMC Syst Biol (2009) 0.93
Antifouling strategies: history and regulation, ecological impacts and mitigation. Mar Pollut Bull (2011) 0.92
Algorithms to qualify respiratory data collected during the transport of trauma patients. Physiol Meas (2006) 0.92
A quantitative quasispecies theory-based model of virus escape mutation under immune selection. Proc Natl Acad Sci U S A (2012) 0.92
Inferring high-confidence human protein-protein interactions. BMC Bioinformatics (2012) 0.92
Systems biology approaches for discovering biomarkers for traumatic brain injury. J Neurotrauma (2013) 0.92
Central Tempol alters basal sympathetic nerve discharge and attenuates sympathetic excitation to central ANG II. Am J Physiol Heart Circ Physiol (2004) 0.91
A unified mathematical model to quantify performance impairment for both chronic sleep restriction and total sleep deprivation. J Theor Biol (2013) 0.91
Exposure to nickel, chromium, or cadmium causes distinct changes in the gene expression patterns of a rat liver derived cell line. PLoS One (2011) 0.91
Clinical inertia in the management of low-density lipoprotein abnormalities in an HIV clinic. Clin Infect Dis (2008) 0.90
PC-PVT: a platform for psychomotor vigilance task testing, analysis, and prediction. Behav Res Methods (2014) 0.89
Quantitative modeling of virus evolutionary dynamics and adaptation in serial passages using empirically inferred fitness landscapes. J Virol (2013) 0.89
Kinetic modeling sheds light on the mode of action of recombinant factor VIIa on thrombin generation. Thromb Res (2011) 0.89
Exploration of prehospital vital sign trends for the prediction of trauma outcomes. Prehosp Emerg Care (2009) 0.88
Categorizing biases in high-confidence high-throughput protein-protein interaction data sets. Mol Cell Proteomics (2011) 0.88
Novel Burkholderia mallei virulence factors linked to specific host-pathogen protein interactions. Mol Cell Proteomics (2013) 0.88
A randomized trial comparing a group exercise programme for back pain patients with individual physiotherapy in a severely deprived area. Disabil Rehabil (2005) 0.88
QuartetS-DB: a large-scale orthology database for prokaryotes and eukaryotes inferred by evolutionary evidence. BMC Bioinformatics (2012) 0.87
Proteomic analysis of bronchoalveolar lavage fluid: effect of acute exposure to diesel exhaust particles in rats. Environ Health Perspect (2007) 0.87
A new metric for quantifying performance impairment on the psychomotor vigilance test. J Sleep Res (2012) 0.87
Evidence of probabilistic behaviour in protein interaction networks. BMC Syst Biol (2008) 0.86
Role of endotoxin and cytokines in the systemic inflammatory response to heat injury. Front Biosci (Schol Ed) (2010) 0.85
Transcriptional analysis of novel hormone receptors PGRMC1 and PGRMC2 as potential biomarkers of breast adenocarcinoma staging. J Surg Res (2010) 0.85
Modeling synergistic drug inhibition of Mycobacterium tuberculosis growth in murine macrophages. Mol Biosyst (2011) 0.85
An improved methodology for individualized performance prediction of sleep-deprived individuals with the two-process model. Sleep (2009) 0.84
Distinct patterns of gene and protein expression elicited by organophosphorus pesticides in Caenorhabditis elegans. BMC Genomics (2009) 0.84
Modeling metabolism and stage-specific growth of Plasmodium falciparum HB3 during the intraerythrocytic developmental cycle. Mol Biosyst (2014) 0.84
Reconstituting protein interaction networks using parameter-dependent domain-domain interactions. BMC Bioinformatics (2013) 0.84
Analysis of secreted proteins as an in vitro model for discovery of liver toxicity markers. J Proteome Res (2010) 0.84
Use of a food and drug administration-approved type 1 diabetes mellitus simulator to evaluate and optimize a proportional-integral-derivative controller. J Diabetes Sci Technol (2012) 0.84
Therapeutic effects of magnetic and copper bracelets in osteoarthritis: a randomised placebo-controlled crossover trial. Complement Ther Med (2009) 0.84
Development of a purification process for adenovirus: controlling virus aggregation to improve the clearance of host cell DNA. Biotechnol Prog (2005) 0.83
The association between vital signs and major hemorrhagic injury is significantly improved after controlling for sources of measurement variability. J Crit Care (2012) 0.83
Automatically-computed prehospital severity scores are equivalent to scores based on medic documentation. J Trauma (2008) 0.83
Development and application of a quantitative RT-PCR potency assay for a pentavalent rotavirus vaccine (RotaTeq). J Virol Methods (2005) 0.83
PSPP: a protein structure prediction pipeline for computing clusters. PLoS One (2009) 0.83
Effect of intraperitoneal radiotelemetry instrumentation on voluntary wheel running and surgical recovery in mice. J Am Assoc Lab Anim Sci (2012) 0.82
Unraveling the conundrum of seemingly discordant protein-protein interaction datasets. Conf Proc IEEE Eng Med Biol Soc (2010) 0.82
Thermal stress and the physiological response to environmental toxicants. Rev Environ Health (2006) 0.82
Hyperthermia-enhanced splenic cytokine gene expression is mediated by the sympathetic nervous system. Physiol Genomics (2004) 0.82
Longitudinal analysis of maternal plasma apolipoproteins in pregnancy: a targeted proteomics approach. Mol Cell Proteomics (2012) 0.82
Probing the extent of randomness in protein interaction networks. PLoS Comput Biol (2008) 0.81
Tissue and circulating expression of IL-1 family members following heat stroke. Physiol Genomics (2011) 0.81
Effect of dexamethasone administered with magnesium sulfate on inflammation-mediated degradation of the blood-brain barrier using an in vitro model. Reprod Sci (2013) 0.81
Classifying noisy protein sequence data: a case study of immunoglobulin light chains. Bioinformatics (2005) 0.81
Intramuscular 17α-hydroxyprogesterone caproate administration attenuates immunoresponsiveness of maternal peripheral blood mononuclear cells. Am J Obstet Gynecol (2010) 0.81
Alterations in gene expression in Caenorhabditis elegans associated with organophosphate pesticide intoxication and recovery. BMC Genomics (2013) 0.81