Published in Genome Biol on January 01, 2014
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Genomic evidence for large, long-lived ancestors to placental mammals. Mol Biol Evol (2012) 0.86
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Evidence for GC-biased gene conversion as a driver of between-lineage differences in avian base composition. Genome Biol (2014) 0.86
The human mutation rate is increasing, even as it slows. Mol Biol Evol (2013) 0.85
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Reconstructing the phylogenetic history of long-term effective population size and life-history traits using patterns of amino acid replacement in mitochondrial genomes of mammals and birds. Genome Biol Evol (2013) 0.84
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Population genomics of the endangered giant Galápagos tortoise. Genome Biol (2013) 0.80
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The genome of a songbird. Nature (2010) 5.90
A genetic variation map for chicken with 2.8 million single-nucleotide polymorphisms. Nature (2004) 5.24
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Evolutionary strata on the chicken Z chromosome: implications for sex chromosome evolution. Genetics (2004) 1.80
Prehistoric contacts over the Straits of Gibraltar indicated by genetic analysis of Iberian Bronze Age cattle. Proc Natl Acad Sci U S A (2005) 1.74
Comparison of the chicken and turkey genomes reveals a higher rate of nucleotide divergence on microchromosomes than macrochromosomes. Genome Res (2004) 1.73
The recombination landscape of the zebra finch Taeniopygia guttata genome. Genome Res (2010) 1.72
Limited number of patrilines in horse domestication. Nat Genet (2004) 1.70
Deterministic mutation rate variation in the human genome. Genome Res (2002) 1.63
Microsatellite evolution inferred from human-chimpanzee genomic sequence alignments. Proc Natl Acad Sci U S A (2002) 1.59
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Strong regional biases in nucleotide substitution in the chicken genome. Mol Biol Evol (2006) 1.50
The evolutionary causes and consequences of sex-biased gene expression. Nat Rev Genet (2013) 1.50
Fast-X on the Z: rapid evolution of sex-linked genes in birds. Genome Res (2007) 1.49
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Evidence for turnover of functional noncoding DNA in mammalian genome evolution. Genomics (2004) 1.45
Male-driven biased gene conversion governs the evolution of base composition in human alu repeats. Mol Biol Evol (2005) 1.44
Comparative genomics based on massive parallel transcriptome sequencing reveals patterns of substitution and selection across 10 bird species. Mol Ecol (2010) 1.44
Insertion-deletion polymorphisms (indels) as genetic markers in natural populations. BMC Genet (2008) 1.43
Genetic mapping in a natural population of collared flycatchers (Ficedula albicollis): conserved synteny but gene order rearrangements on the avian Z chromosome. Genetics (2006) 1.41
Reduced variation on the chicken Z chromosome. Genetics (2004) 1.39
To what extent do microsatellite markers reflect genome-wide genetic diversity in natural populations? Mol Ecol (2008) 1.37
Genomics of natural bird populations: a gene-based set of reference markers evenly spread across the avian genome. Mol Ecol (2007) 1.36
The chicken (Gallus gallus) Z chromosome contains at least three nonlinear evolutionary strata. Genetics (2008) 1.33
Low levels of nucleotide diversity in mammalian Y chromosomes. Mol Biol Evol (2003) 1.33
Heterozygosity-fitness correlations in zebra finches: microsatellite markers can be better than their reputation. Mol Ecol (2012) 1.33
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A gene-based genetic linkage map of the collared flycatcher (Ficedula albicollis) reveals extensive synteny and gene-order conservation during 100 million years of avian evolution. Genetics (2008) 1.28
Genome-wide analysis of microsatellite polymorphism in chicken circumventing the ascertainment bias. Genome Res (2008) 1.27
Chicken W: a genetically uniform chromosome in a highly variable genome. Proc Natl Acad Sci U S A (2004) 1.26
Copy number variation, chromosome rearrangement, and their association with recombination during avian evolution. Genome Res (2010) 1.26
Bottlenecked but long-lived: high genetic diversity retained in white-tailed eagles upon recovery from population decline. Biol Lett (2006) 1.24
Sex-linkage of sexually antagonistic genes is predicted by female, but not male, effects in birds. Evolution (2009) 1.22
The unique genomic properties of sex-biased genes: insights from avian microarray data. BMC Genomics (2008) 1.22
Heterogeneity in the rate and pattern of germline mutation at individual microsatellite loci. Nucleic Acids Res (2002) 1.22
Recombination drives vertebrate genome contraction. PLoS Genet (2012) 1.20
Faster-Z evolution is predominantly due to genetic drift. Mol Biol Evol (2009) 1.20
Dynamic evolution of base composition: causes and consequences in avian phylogenomics. Mol Biol Evol (2011) 1.17
Ontogenetic complexity of sexual dimorphism and sex-specific selection. Mol Biol Evol (2010) 1.16
Nonlinear dynamics of nonsynonymous (dN) and synonymous (dS) substitution rates affects inference of selection. Genome Biol Evol (2009) 1.15
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Life history and the male mutation bias. Evolution (2003) 1.14
Speciation in Ficedula flycatchers. Philos Trans R Soc Lond B Biol Sci (2010) 1.14
The genomic landscape of short insertion and deletion polymorphisms in the chicken (Gallus gallus) Genome: a high frequency of deletions in tandem duplicates. Genetics (2007) 1.13
Molecular evolution of genes in avian genomes. Genome Biol (2010) 1.12
Fast accumulation of nonsynonymous mutations on the female-specific W chromosome in birds. J Mol Evol (2005) 1.12
A high-density linkage map enables a second-generation collared flycatcher genome assembly and reveals the patterns of avian recombination rate variation and chromosomal evolution. Mol Ecol (2014) 1.11
Y chromosome conserved anchored tagged sequences (YCATS) for the analysis of mammalian male-specific DNA. Mol Ecol (2003) 1.11
Nonrandom distribution of genes with sex-biased expression in the chicken genome. Evolution (2006) 1.09
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Gene conversion drives the evolution of HINTW, an ampliconic gene on the female-specific avian W chromosome. Mol Biol Evol (2005) 1.08
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A low rate of simultaneous double-nucleotide mutations in primates. Mol Biol Evol (2003) 0.93
Estimation of linkage disequilibrium and interspecific gene flow in Ficedula flycatchers by a newly developed 50k single-nucleotide polymorphism array. Mol Ecol Resour (2014) 0.93
Ancient DNA reveals traces of Iberian Neolithic and Bronze Age lineages in modern Iberian horses. Mol Ecol (2009) 0.91
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The genomic signature of sexual selection in the genetic diversity of the sex chromosomes and autosomes. Evolution (2012) 0.88
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The relationship between microsatellite polymorphism and recombination hot spots in the human genome. Mol Biol Evol (2008) 0.88
Substitution rate heterogeneity and the male mutation bias. J Mol Evol (2006) 0.87
Efficient selection of branch-specific models of sequence evolution. Mol Biol Evol (2012) 0.87
A high-density scan of the Z chromosome in Ficedula flycatchers reveals candidate loci for diversifying selection. Evolution (2010) 0.87
Lack of dosage compensation accompanies the arrested stage of sex chromosome evolution in ostriches. Mol Biol Evol (2013) 0.87
Evidence for GC-biased gene conversion as a driver of between-lineage differences in avian base composition. Genome Biol (2014) 0.86