Published in Extremophiles on February 26, 2015
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Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl Environ Microbiol (2007) 60.97
The Ribosomal Database Project: improved alignments and new tools for rRNA analysis. Nucleic Acids Res (2008) 52.43
Search and clustering orders of magnitude faster than BLAST. Bioinformatics (2010) 51.97
Microbial population structures in the deep marine biosphere. Science (2007) 14.61
The versatile epsilon-proteobacteria: key players in sulphidic habitats. Nat Rev Microbiol (2006) 3.26
Global patterns of bacterial beta-diversity in seafloor and seawater ecosystems. PLoS One (2011) 3.01
Characterization of an autotrophic sulfide-oxidizing marine Arcobacter sp. that produces filamentous sulfur. Appl Environ Microbiol (2002) 2.24
Sulfurimonas autotrophica gen. nov., sp. nov., a novel sulfur-oxidizing epsilon-proteobacterium isolated from hydrothermal sediments in the Mid-Okinawa Trough. Int J Syst Evol Microbiol (2003) 1.82
Sulfurovum lithotrophicum gen. nov., sp. nov., a novel sulfur-oxidizing chemolithoautotroph within the epsilon-Proteobacteria isolated from Okinawa Trough hydrothermal sediments. Int J Syst Evol Microbiol (2004) 1.64
Increased species diversity and extended habitat range of sulfur-oxidizing Thiomicrospira spp. Appl Environ Microbiol (1997) 1.32
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Isolated communities of Epsilonproteobacteria in hydrothermal vent fluids of the Mariana Arc seamounts. FEMS Microbiol Ecol (2010) 1.22
Inter-field variability in the microbial communities of hydrothermal vent deposits from a back-arc basin. Geobiology (2012) 1.02
Identification of 16S ribosomal DNA-defined bacterial populations at a shallow submarine hydrothermal vent near Milos Island (Greece). Appl Environ Microbiol (2000) 1.00
Culture-dependent and -independent characterization of microbial communities associated with a shallow submarine hydrothermal system occurring within a coral reef off Taketomi Island, Japan. Appl Environ Microbiol (2007) 1.00
Shallow water marine sediment bacterial community shifts along a natural CO2 gradient in the Mediterranean Sea off Vulcano, Italy. Microb Ecol (2014) 0.94
Lebetimonas acidiphila gen. nov., sp. nov., a novel thermophilic, acidophilic, hydrogen-oxidizing chemolithoautotroph within the 'Epsilonproteobacteria', isolated from a deep-sea hydrothermal fumarole in the Mariana Arc. Int J Syst Evol Microbiol (2005) 0.90
Effects of shallow-water hydrothermal venting on biological communities of coastal marine ecosystems of the western Pacific. Adv Mar Biol (2006) 0.88
Diffuse flow environments within basalt- and sediment-based hydrothermal vent ecosystems harbor specialized microbial communities. Front Microbiol (2013) 0.88
Microbiological characterization of post-eruption "snowblower" vents at Axial Seamount, Juan de Fuca Ridge. Front Microbiol (2013) 0.86
Three novel halotolerant and thermophilic Geobacillus strains from shallow marine vents. Syst Appl Microbiol (2002) 0.86
Bacterial and archaeal populations at two shallow hydrothermal vents off Panarea Island (Eolian Islands, Italy). Extremophiles (2008) 0.84
Archaeal and bacterial diversity in an arsenic-rich shallow-sea hydrothermal system undergoing phase separation. Front Microbiol (2013) 0.82
A polyphasic taxonomic study of thermophilic bacilli from shallow, marine vents. Syst Appl Microbiol (2001) 0.81
Prokaryote diversity and virus abundance in shallow hydrothermal vents of the Mediterranean Sea (Panarea Island) and the Pacific Ocean (north Sulawesi-Indonesia). Microb Ecol (2008) 0.81
Diversity of prokaryotic community at a shallow marine hydrothermal site elucidated by Illumina sequencing technology. Curr Microbiol (2014) 0.79
New bacilli from shallow hydrothermal vents of Panarea Island (Italy) and their biotechnological potential. J Appl Microbiol (2012) 0.77
Ecological significance of microdiversity: identical 16S rRNA gene sequences can be found in bacteria with highly divergent genomes and ecophysiologies. Appl Environ Microbiol (2004) 2.33
amoA-based consensus phylogeny of ammonia-oxidizing archaea and deep sequencing of amoA genes from soils of four different geographic regions. Environ Microbiol (2011) 2.02
The complete genome sequence of the algal symbiont Dinoroseobacter shibae: a hitchhiker's guide to life in the sea. ISME J (2009) 2.00
Genome sequences of the biotechnologically important Bacillus megaterium strains QM B1551 and DSM319. J Bacteriol (2011) 1.86
Cyclic AMP and acyl homoserine lactones increase the cultivation efficiency of heterotrophic bacteria from the central Baltic Sea. Appl Environ Microbiol (2002) 1.83
An obligately photosynthetic bacterial anaerobe from a deep-sea hydrothermal vent. Proc Natl Acad Sci U S A (2005) 1.58
SYSTOMONAS--an integrated database for systems biology analysis of Pseudomonas. Nucleic Acids Res (2007) 1.55
Effect of signal compounds and incubation conditions on the culturability of freshwater bacterioplankton. Appl Environ Microbiol (2003) 1.40
PRODORIC (release 2009): a database and tool platform for the analysis of gene regulation in prokaryotes. Nucleic Acids Res (2008) 1.39
Ongoing modification of Mediterranean Pleistocene sapropels mediated by prokaryotes. Science (2002) 1.27
General relationships between abiotic soil properties and soil biota across spatial scales and different land-use types. PLoS One (2012) 1.25
The complex methylome of the human gastric pathogen Helicobacter pylori. Nucleic Acids Res (2013) 1.25
Biodiversity at multiple trophic levels is needed for ecosystem multifunctionality. Nature (2016) 1.21
Edaphobacter modestus gen. nov., sp. nov., and Edaphobacter aggregans sp. nov., acidobacteria isolated from alpine and forest soils. Int J Syst Evol Microbiol (2008) 1.21
Environmental factors affect Acidobacterial communities below the subgroup level in grassland and forest soils. Appl Environ Microbiol (2012) 1.21
Physiology and phylogeny of green sulfur bacteria forming a monospecific phototrophic assemblage at a depth of 100 meters in the Black Sea. Appl Environ Microbiol (2005) 1.21
Characterization of JG024, a pseudomonas aeruginosa PB1-like broad host range phage under simulated infection conditions. BMC Microbiol (2010) 1.15
Specific detection, isolation, and characterization of selected, previously uncultured members of the freshwater bacterioplankton community. Appl Environ Microbiol (2005) 1.12
217 000-year-old DNA sequences of green sulfur bacteria in Mediterranean sapropels and their implications for the reconstruction of the paleoenvironment. Environ Microbiol (2007) 1.10
13,16-Dimethyl octacosanedioic acid (iso-diabolic acid), a common membrane-spanning lipid of Acidobacteria subdivisions 1 and 3. Appl Environ Microbiol (2011) 1.10
Sequencing and characterization of Pseudomonas aeruginosa phage JG004. BMC Microbiol (2011) 1.04
Transcriptional response of the photoheterotrophic marine bacterium Dinoroseobacter shibae to changing light regimes. ISME J (2011) 1.04
A novel approach for high throughput cultivation assays and the isolation of planktonic bacteria. FEMS Microbiol Ecol (2003) 1.04
Biogeography, evolution, and diversity of epibionts in phototrophic consortia. Appl Environ Microbiol (2004) 1.03
Blastocatella fastidiosa gen. nov., sp. nov., isolated from semiarid savanna soil - the first described species of Acidobacteria subdivision 4. Syst Appl Microbiol (2012) 1.03
Congenital bilateral mid-ureteral stricture: a unique case. J Pediatr Urol (2008) 1.03
Sandarakinorhabdus limnophila gen. nov., sp. nov., a novel bacteriochlorophyll a-containing, obligately aerobic bacterium isolated from freshwater lakes. Int J Syst Evol Microbiol (2006) 1.02
Metabolic engineering of cobalamin (vitamin B12) production in Bacillus megaterium. Microb Biotechnol (2009) 0.99
First genome sequences of Achromobacter phages reveal new members of the N4 family. Virol J (2014) 0.95
Novel bacteriochlorophyll e structures and species-specific variability of pigment composition in green sulfur bacteria. Arch Microbiol (2002) 0.94
Think pink: photosynthesis, plasmids and the Roseobacter clade. Environ Microbiol (2012) 0.94
Large-scale distribution and activity patterns of an extremely low-light-adapted population of green sulfur bacteria in the Black Sea. Environ Microbiol (2010) 0.93
Ultrastructure, tactic behaviour and potential for sulfate reduction of a novel multicellular magnetotactic prokaryote from North Sea sediments. Environ Microbiol (2009) 0.93
Characterization and in situ carbon metabolism of phototrophic consortia. Appl Environ Microbiol (2003) 0.92
Systems biology of recombinant protein production using Bacillus megaterium. Methods Enzymol (2011) 0.92
Genomic analysis reveals key aspects of prokaryotic symbiosis in the phototrophic consortium "Chlorochromatium aggregatum". Genome Biol (2013) 0.92
The significance of organic carbon compounds for in situ metabolism and chemotaxis of phototrophic consortia. Environ Microbiol (2003) 0.92
BacDive--the Bacterial Diversity Metadatabase. Nucleic Acids Res (2013) 0.92
Ultrastructural characterization of the prokaryotic symbiosis in "Chlorochromatium aggregatum". J Bacteriol (2008) 0.91
Chromera velia, endosymbioses and the rhodoplex hypothesis--plastid evolution in cryptophytes, alveolates, stramenopiles, and haptophytes (CASH lineages). Genome Biol Evol (2014) 0.91
Determinants of Acidobacteria activity inferred from the relative abundances of 16S rRNA transcripts in German grassland and forest soils. Environ Microbiol (2013) 0.91
Widespread distribution and high abundance of Rhizobium radiobacter within Mediterranean subsurface sediments. Environ Microbiol (2006) 0.90
An exopolysaccharide produced by Geobacillus thermodenitrificans strain B3-72: antiviral activity on immunocompetent cells. Immunol Lett (2009) 0.89
Molecular characterization of the nonphotosynthetic partner bacterium in the consortium "Chlorochromatium aggregatum". Appl Environ Microbiol (2005) 0.89
Complete Genome Sequence of Highly Adherent Pseudomonas aeruginosa Small-Colony Variant SCV20265. Genome Announc (2014) 0.87
A new purple sulfur bacterium isolated from a littoral microbial mat, Thiorhodococcus drewsii sp. nov. Arch Microbiol (2003) 0.86
ROSY--a flexible and universal database and bioinformatics tool platform for Roseobacter related species. In Silico Biol (2008) 0.86
Sphingomonas kaistensis sp. nov., a novel alphaproteobacterium containing pufLM genes. Int J Syst Evol Microbiol (2007) 0.86
Thalassospira sp. isolated from the oligotrophic eastern Mediterranean Sea exhibits chemotaxis toward inorganic phosphate during starvation. Appl Environ Microbiol (2011) 0.85
Chromosomal Locations of mcr-1 and bla CTX-M-15 in Fluoroquinolone-Resistant Escherichia coli ST410. Emerg Infect Dis (2016) 0.85
Bacterial and archaeal populations at two shallow hydrothermal vents off Panarea Island (Eolian Islands, Italy). Extremophiles (2008) 0.84
Identification and analysis of four candidate symbiosis genes from 'Chlorochromatium aggregatum', a highly developed bacterial symbiosis. Environ Microbiol (2008) 0.84
Complete Genome of Ignavibacterium album, a Metabolically Versatile, Flagellated, Facultative Anaerobe from the Phylum Chlorobi. Front Microbiol (2012) 0.83
Close Interspecies Interactions between Prokaryotes from Sulfureous Environments. Front Microbiol (2011) 0.82
Effects of plant biomass, plant diversity, and water content on bacterial communities in soil lysimeters: implications for the determinants of bacterial diversity. Appl Environ Microbiol (2007) 0.82
Chlorobium chlorochromatii sp. nov., a symbiotic green sulfur bacterium isolated from the phototrophic consortium "Chlorochromatium aggregatum". Arch Microbiol (2006) 0.82
Massilia brevitalea sp. nov., a novel betaproteobacterium isolated from lysimeter soil. Int J Syst Evol Microbiol (2008) 0.81
Construction and characterization of nitrate and nitrite respiring Pseudomonas putida KT2440 strains for anoxic biotechnical applications. J Biotechnol (2012) 0.81
Description of Sphingorhabdus planktonica gen. nov., sp. nov. and reclassification of three related members of the genus Sphingopyxis in the genus Sphingorhabdus gen. nov. Int J Syst Evol Microbiol (2012) 0.80
Identification and targeted cultivation of abundant novel freshwater sphingomonads and analysis of their population substructure. Appl Environ Microbiol (2011) 0.80
Heterotrophic symbionts of phototrophic consortia: members of a novel diverse cluster of Betaproteobacteria characterized by a tandem rrn operon structure. Environ Microbiol (2007) 0.80
Expression-based identification of genetic determinants of the bacterial symbiosis 'Chlorochromatium aggregatum'. Environ Microbiol (2010) 0.80
Enrichment of previously uncultured bacteria from natural complex communities by adhesion to solid surfaces. Environ Microbiol (2012) 0.79
A novel EPS-producing strain of Bacillus licheniformis isolated from a shallow vent off Panarea Island (Italy). Curr Microbiol (2013) 0.79
High prevalence of arcobacter carriage in older subjects with type 2 diabetes. J Biomed Biotechnol (2010) 0.79
Diversity of prokaryotic community at a shallow marine hydrothermal site elucidated by Illumina sequencing technology. Curr Microbiol (2014) 0.79
Systems biology of recombinant protein production in Bacillus megaterium. Adv Biochem Eng Biotechnol (2010) 0.78
Genome Resequencing of the Virulent and Multidrug-Resistant Reference Strain Clostridium difficile 630. Genome Announc (2015) 0.78
Successful thoracoscopic resection of pulmonary metastasis less than 1 cm in size utilizing preoperative CT-guided wire localization. J Laparoendosc Adv Surg Tech A (2009) 0.78
GeneReporter--sequence-based document retrieval and annotation. Bioinformatics (2011) 0.78
Sphingobium limneticum sp. nov. and Sphingobium boeckii sp. nov., two freshwater planktonic members of the family Sphingomonadaceae, and reclassification of Sphingomonas suberifaciens as Sphingobium suberifaciens comb. nov. Int J Syst Evol Microbiol (2012) 0.78
Complete Genome Sequence of the Urethral Catheter Isolate Myroides sp. A21. Genome Announc (2015) 0.77
Genome Sequence of the Small-Colony Variant Pseudomonas aeruginosa MH27, Isolated from a Chronic Urethral Catheter Infection. Genome Announc (2014) 0.77
Sphingomonas starnbergensis sp. nov., isolated from a prealpine freshwater lake. Int J Syst Evol Microbiol (2012) 0.77
Complete Genome Sequence of a CTX-M-15-Producing Klebsiella pneumoniae Outbreak Strain from Multilocus Sequence Type 514. Genome Announc (2015) 0.77
Reclassification and emended description of Caulobacter leidyi as Sphingomonas leidyi comb. nov., and emendation of the genus Sphingomonas. Int J Syst Evol Microbiol (2012) 0.77
Detection and enumeration of Arcobacter spp. in the coastal environment of the Straits of Messina (Italy). New Microbiol (2005) 0.77
The puf operon of the purple sulfur bacterium Amoebobacter purpureus: structure, transcription and phylogenetic analysis. Arch Microbiol (2005) 0.77
Distribution and diversity of bacteria in a saline meromictic lake as determined by PCR-DGGE of 16S rRNA gene fragments. Curr Microbiol (2010) 0.76
Desulfosporomusa polytropa gen. nov., sp. nov., a novel sulfate-reducing bacterium from sediments of an oligotrophic lake. Arch Microbiol (2004) 0.76
Terriglobus albidus sp. nov., a member of the family Acidobacteriaceae isolated from Namibian semiarid savannah soil. Int J Syst Evol Microbiol (2015) 0.75
Subfossil 16S rRNA gene sequences of green sulfur bacteria in the Black Sea and their implications for past photic zone anoxia. Appl Environ Microbiol (2007) 0.75
Puf operon sequences and inferred structures of light-harvesting complexes of three closely related Chromatiaceae exhibiting different absorption characteristics. Arch Microbiol (2011) 0.75
Water quality and ecological status of the Alcantara River estuary (Italy). New Microbiol (2009) 0.75
Corrigendum: The Mouse Intestinal Bacterial Collection (miBC) provides host-specific insight into cultured diversity and functional potential of the gut microbiota. Nat Microbiol (2016) 0.75
Global occurrence and heterogeneity of the Roseobacter-clade species Ruegeria mobilis. ISME J (2017) 0.75