Identification of 16S ribosomal DNA-defined bacterial populations at a shallow submarine hydrothermal vent near Milos Island (Greece).

PubWeight™: 1.00‹?› | Rank: Top 15%

🔗 View Article (PMC 92119)

Published in Appl Environ Microbiol on July 01, 2000

Authors

S M Sievert1, J Kuever, G Muyzer

Author Affiliations

1: Department of Microbiology, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany. ssievert@mpi-bremen.de

Articles citing this

Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils. Appl Environ Microbiol (2009) 2.75

Isolation and characterization of soil bacteria that define Terriglobus gen. nov., in the phylum Acidobacteria. Appl Environ Microbiol (2007) 2.41

Environmental and gut bacteroidetes: the food connection. Front Microbiol (2011) 2.01

Distribution of archaea in a black smoker chimney structure. Appl Environ Microbiol (2001) 1.82

Influence of plant polymers on the distribution and cultivation of bacteria in the phylum Acidobacteria. Appl Environ Microbiol (2010) 1.21

Bacterial community composition in different sediments from the Eastern Mediterranean Sea: a comparison of four 16S ribosomal DNA clone libraries. Microb Ecol (2005) 1.20

Links between geographic location, environmental factors, and microbial community composition in sediments of the Eastern Mediterranean Sea. Microb Ecol (2005) 1.03

Rhodothermus marinus: physiology and molecular biology. Extremophiles (2005) 1.02

Culture-dependent and -independent characterization of microbial communities associated with a shallow submarine hydrothermal system occurring within a coral reef off Taketomi Island, Japan. Appl Environ Microbiol (2007) 1.00

Biogeography and biodiversity in sulfide structures of active and inactive vents at deep-sea hydrothermal fields of the Southern Mariana Trough. Appl Environ Microbiol (2010) 0.98

Recent developments in the thermophilic microbiology of deep-sea hydrothermal vents. Extremophiles (2006) 0.93

Thermotomaculum hydrothermale gen. nov., sp. nov., a novel heterotrophic thermophile within the phylum Acidobacteria from a deep-sea hydrothermal vent chimney in the Southern Okinawa Trough. Extremophiles (2012) 0.90

Molecular approaches: advantages and artifacts in assessing bacterial diversity. J Ind Microbiol Biotechnol (2007) 0.88

Bacterial and archaeal populations at two shallow hydrothermal vents off Panarea Island (Eolian Islands, Italy). Extremophiles (2008) 0.84

Archaeal and bacterial diversity in an arsenic-rich shallow-sea hydrothermal system undergoing phase separation. Front Microbiol (2013) 0.82

Diversity and phylogenetic analyses of bacteria from a shallow-water hydrothermal vent in Milos island (Greece). Front Microbiol (2013) 0.82

Deep-sea hydrothermal vent bacteria related to human pathogenic Vibrio species. Proc Natl Acad Sci U S A (2015) 0.79

Diversity of prokaryotic community at a shallow marine hydrothermal site elucidated by Illumina sequencing technology. Curr Microbiol (2014) 0.79

Order-specific 16S rRNA-targeted oligonucleotide probes for (hyper)thermophilic archaea and bacteria. Extremophiles (2004) 0.78

Changes in prokaryotic community composition accompanying a pronounced temperature shift of a shallow marine thermal brine pool (Panarea Island, Italy). Extremophiles (2015) 0.76

Thiosulfate oxidation by Thiomicrospira thermophila: metabolic flexibility in response to ambient geochemistry. Environ Microbiol (2016) 0.75

Genomic Analysis of Caldithrix abyssi, the Thermophilic Anaerobic Bacterium of the Novel Bacterial Phylum Calditrichaeota. Front Microbiol (2017) 0.75

Characterization of Chemosynthetic Microbial Mats Associated with Intertidal Hydrothermal Sulfur Vents in White Point, San Pedro, CA, USA. Front Microbiol (2016) 0.75

Isolation and Complete Genome Sequence of Algibacter alginolytica sp. nov., a Novel Seaweed-Degrading Bacteroidetes Bacterium with Diverse Putative Polysaccharide Utilization Loci. Appl Environ Microbiol (2016) 0.75

Relative Importance of Chemoautotrophy for Primary Production in a Light Exposed Marine Shallow Hydrothermal System. Front Microbiol (2017) 0.75

Articles cited by this

Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol Rev (1995) 62.96

Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol (1993) 51.00

A molecular view of microbial diversity and the biosphere. Science (1997) 38.62

Novel division level bacterial diversity in a Yellowstone hot spring. J Bacteriol (1998) 11.22

How close is close: 16S rRNA sequence identity may not be sufficient to guarantee species identity. Int J Syst Bacteriol (1992) 11.19

Phylogenetic relationships of Thiomicrospira species and their identification in deep-sea hydrothermal vent samples by denaturing gradient gel electrophoresis of 16S rDNA fragments. Arch Microbiol (1995) 9.39

Denaturing gradient gel electrophoresis profiles of 16S rRNA-defined populations inhabiting a hot spring microbial mat community. Appl Environ Microbiol (1996) 8.65

Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology. Antonie Van Leeuwenhoek (1998) 8.42

PCR primers to amplify 16S rRNA genes from cyanobacteria. Appl Environ Microbiol (1997) 6.70

Phylogenetic diversity of the bacterial community from a microbial mat at an active, hydrothermal vent system, Loihi Seamount, Hawaii. Appl Environ Microbiol (1995) 5.04

Estimation of diversity and community structure through restriction fragment length polymorphism distribution analysis of bacterial 16S rRNA genes from a microbial mat at an active, hydrothermal vent system, Loihi Seamount, Hawaii. Appl Environ Microbiol (1994) 4.87

Quantifying microbial diversity: morphotypes, 16S rRNA genes, and carotenoids of oxygenic phototrophs in microbial mats. Appl Environ Microbiol (1999) 4.71

Wide distribution and diversity of members of the bacterial kingdom Acidobacterium in the environment. Appl Environ Microbiol (1999) 3.89

Geomicrobiology of deep-sea hydrothermal vents. Science (1985) 3.40

Microbial Community Composition of Wadden Sea Sediments as Revealed by Fluorescence In Situ Hybridization. Appl Environ Microbiol (1998) 3.30

Dominance of one bacterial phylotype at a Mid-Atlantic Ridge hydrothermal vent site. Proc Natl Acad Sci U S A (1995) 2.51

Description of Caldicellulosiruptor saccharolyticus gen. nov., sp. nov: an obligately anaerobic, extremely thermophilic, cellulolytic bacterium. FEMS Microbiol Lett (1994) 1.64

Spatial heterogeneity of bacterial populations along an environmental gradient at a shallow submarine hydrothermal vent near Milos Island (Greece). Appl Environ Microbiol (1999) 1.50

Distribution of microorganisms in deep-sea hydrothermal vent chimneys investigated by whole-cell hybridization and enrichment culture of thermophilic subpopulations. Appl Environ Microbiol (1997) 1.50

The response of the microbial community of marine sediments to organic carbon input under anaerobic conditions. Syst Appl Microbiol (1999) 1.28

Comparison of a new thiomicrospira strain from the mid-atlantic ridge with known hydrothermal vent isolates Appl Environ Microbiol (1998) 1.22

Distribution and diversity of sulfur-oxidizing Thiomicrospira spp. at a shallow-water hydrothermal vent in the Aegean Sea (Milos, Greece). Appl Environ Microbiol (1999) 1.21

Anaerobic spirochete from a deep-sea hydrothermal vent. Appl Environ Microbiol (1982) 1.01

Desulfacinum hydrothermale sp. nov., a thermophilic, sulfate-reducing bacterium from geothermally heated sediments near Milos Island (Greece). Int J Syst Evol Microbiol (2000) 0.83

Articles by these authors

Denaturing gradient gel electrophoresis profiles of 16S rRNA-defined populations inhabiting a hot spring microbial mat community. Appl Environ Microbiol (1996) 8.65

PCR primers to amplify 16S rRNA genes from cyanobacteria. Appl Environ Microbiol (1997) 6.70

Missing lithotroph identified as new planctomycete. Nature (1999) 6.17

Distribution of sulfate-reducing bacteria in a stratified fjord (Mariager Fjord, Denmark) as evaluated by most-probable-number counts and denaturing gradient gel electrophoresis of PCR-amplified ribosomal DNA fragments. Appl Environ Microbiol (1996) 5.39

Quantifying microbial diversity: morphotypes, 16S rRNA genes, and carotenoids of oxygenic phototrophs in microbial mats. Appl Environ Microbiol (1999) 4.71

Optimization of terminal-restriction fragment length polymorphism analysis for complex marine bacterioplankton communities and comparison with denaturing gradient gel electrophoresis. Appl Environ Microbiol (1999) 3.41

Identification of bacteria in a biodegraded wall painting by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA. Appl Environ Microbiol (1996) 2.95

Molecular identification of bacteria from a coculture by denaturing gradient gel electrophoresis of 16S ribosomal DNA fragments as a tool for isolation in pure cultures. Appl Environ Microbiol (1996) 2.84

Diversity of sulfate-reducing bacteria in oxic and anoxic regions of a microbial mat characterized by comparative analysis of dissimilatory sulfite reductase genes. Appl Environ Microbiol (1999) 2.55

Identification of and spatio-temporal differences between microbial assemblages from two neighboring sulfurous lakes: comparison by microscopy and denaturing gradient gel electrophoresis. Appl Environ Microbiol (2000) 2.51

Genetic diversity of Desulfovibrio spp. in environmental samples analyzed by denaturing gradient gel electrophoresis of [NiFe] hydrogenase gene fragments. Appl Environ Microbiol (1995) 2.44

Phenotypic and phylogenetic analyses show Microcoleus chthonoplastes to be a cosmopolitan cyanobacterium. Appl Environ Microbiol (1996) 1.99

The anaerobic oxidation of ammonium. FEMS Microbiol Rev (1998) 1.97

Bacteriophage diversity in the North Sea. Appl Environ Microbiol (1998) 1.82

The phylogeny of unicellular, extremely halotolerant cyanobacteria. Arch Microbiol (1998) 1.79

Unexpected population distribution in a microbial mat community: sulfate-reducing bacteria localized to the highly oxic chemocline in contrast to a eukaryotic preference for anoxia. Appl Environ Microbiol (1999) 1.75

Successional changes in the genetic diversity of a marine bacterial assemblage during confinement. Arch Microbiol (2000) 1.50

Spatial heterogeneity of bacterial populations along an environmental gradient at a shallow submarine hydrothermal vent near Milos Island (Greece). Appl Environ Microbiol (1999) 1.50

Diversity of thiosulfate-oxidizing bacteria from marine sediments and hydrothermal vents. Appl Environ Microbiol (2000) 1.50

Diversity of sulfur isotope fractionations by sulfate-reducing prokaryotes. Appl Environ Microbiol (2001) 1.47

Novel principles in the microbial conversion of nitrogen compounds. Antonie Van Leeuwenhoek (1997) 1.46

Dethiobacter alkaliphilus gen. nov. sp. nov., and Desulfurivibrio alkaliphilus gen. nov. sp. nov.: two novel representatives of reductive sulfur cycle from soda lakes. Extremophiles (2008) 1.36

Increased species diversity and extended habitat range of sulfur-oxidizing Thiomicrospira spp. Appl Environ Microbiol (1997) 1.32

Genetic diversity and expression of the [NiFe] hydrogenase large-subunit gene of Desulfovibrio spp. in environmental samples. Appl Environ Microbiol (1997) 1.31

Skeletal matrices, muci, and the origin of invertebrate calcification. Proc Natl Acad Sci U S A (1996) 1.22

Distribution and diversity of sulfur-oxidizing Thiomicrospira spp. at a shallow-water hydrothermal vent in the Aegean Sea (Milos, Greece). Appl Environ Microbiol (1999) 1.21

Distribution of sulfate-reducing and methanogenic bacteria in anaerobic aggregates determined by microsensor and molecular analyses. Appl Environ Microbiol (1999) 1.21

Thiomicrospira kuenenii sp. nov. and Thiomicrospira frisia sp. nov., two mesophilic obligately chemolithoautotrophic sulfur-oxidizing bacteria isolated from an intertidal mud flat. Int J Syst Bacteriol (1999) 1.19

Matching molecular diversity and ecophysiology of benthic cyanobacteria and diatoms in communities along a salinity gradient. Environ Microbiol (2000) 1.16

A simple and rapid electrophoresis method to detect sequence variation in PCR-amplified DNA fragments. Nucleic Acids Res (1995) 1.09

Phototrophic biofilms and their potential applications. J Appl Phycol (2007) 1.09

The halotolerance and phylogeny of cyanobacteria with tightly coiled trichomes (Spirulina Turpin) and the description of Halospirulina tapeticola gen. nov., sp. nov. Int J Syst Evol Microbiol (2000) 1.03

A new approach to determine the genetic diversity of viable and active bacteria in aquatic ecosystems. Cytometry (2001) 0.97

Relative abundance of Archaea and Bacteria along a thermal gradient of a shallow-water hydrothermal vent quantified by rRNA slot-blot hybridization. Microbiology (2000) 0.96

Desulfurispira natronophila gen. nov. sp. nov.: an obligately anaerobic dissimilatory sulfur-reducing bacterium from soda lakes. Extremophiles (2010) 0.95

Halothiobacillus kellyi sp. nov., a mesophilic, obligately chemolithoautotrophic, sulfur-oxidizing bacterium isolated from a shallow-water hydrothermal vent in the Aegean Sea, and emended description of the genus Halothiobacillus. Int J Syst Evol Microbiol (2000) 0.95

Anaerobic growth of the haloalkaliphilic denitrifying sulfur-oxidizing bacterium Thialkalivibrio thiocyanodenitrificans sp. nov. with thiocyanate. Microbiology (2004) 0.93

Desulfurispirillum alkaliphilum gen. nov. sp. nov., a novel obligately anaerobic sulfur- and dissimilatory nitrate-reducing bacterium from a full-scale sulfide-removing bioreactor. Extremophiles (2007) 0.93

Thiomicrospira chilensis sp. nov., a mesophilic obligately chemolithoautotrophic sulfuroxidizing bacterium isolated from a Thioploca mat. Int J Syst Bacteriol (1999) 0.93

Propionate and butyrate dependent bacterial sulfate reduction at extremely haloalkaline conditions and description of Desulfobotulus alkaliphilus sp. nov. Extremophiles (2009) 0.92

Aerobic organic carbon mineralization by sulfate-reducing bacteria in the oxygen-saturated photic zone of a hypersaline microbial mat. Microb Ecol (2005) 0.92

Dethiosulfovibrio russensis sp. nov., Dethosulfovibrio marinus sp. nov. and Dethosulfovibrio acidaminovorans sp. nov., novel anaerobic, thiosulfate- and sulfur-reducing bacteria isolated from 'Thiodendron' sulfur mats in different saline environments. Int J Syst Evol Microbiol (2001) 0.90

Isolation and characterization of a novel facultatively alkaliphilic Nitrobacter species, N. alkalicus sp. nov. Arch Microbiol (1998) 0.88

Culturable diversity of lithotrophic haloalkaliphilic sulfate-reducing bacteria in soda lakes and the description of Desulfonatronum thioautotrophicum sp. nov., Desulfonatronum thiosulfatophilum sp. nov., Desulfonatronovibrio thiodismutans sp. nov., and Desulfonatronovibrio magnus sp. nov. Extremophiles (2011) 0.88

FISH shows that Desulfotomaculum spp. are the dominating sulfate-reducing bacteria in a pristine aquifer. Microb Ecol (2003) 0.87

Microbiological analysis of the population of extremely haloalkaliphilic sulfur-oxidizing bacteria dominating in lab-scale sulfide-removing bioreactors. Appl Microbiol Biotechnol (2008) 0.87

Molecular characterization of microbial populations in groundwater sources and sand filters for drinking water production. Water Res (2008) 0.87

Heterotrophic pioneers facilitate phototrophic biofilm development. Microb Ecol (2007) 0.85

Natronoflexus pectinivorans gen. nov. sp. nov., an obligately anaerobic and alkaliphilic fermentative member of Bacteroidetes from soda lakes. Extremophiles (2011) 0.84

Effect of elevated salt concentrations on the aerobic granular sludge process: linking microbial activity with microbial community structure. Appl Environ Microbiol (2011) 0.83

Desulfacinum hydrothermale sp. nov., a thermophilic, sulfate-reducing bacterium from geothermally heated sediments near Milos Island (Greece). Int J Syst Evol Microbiol (2000) 0.83

Desulfuribacillus alkaliarsenatis gen. nov. sp. nov., a deep-lineage, obligately anaerobic, dissimilatory sulfur and arsenate-reducing, haloalkaliphilic representative of the order Bacillales from soda lakes. Extremophiles (2012) 0.83

Anaerobic utilization of pectinous substrates at extremely haloalkaline conditions by Natranaerovirga pectinivora gen. nov., sp. nov., and Natranaerovirga hydrolytica sp. nov., isolated from hypersaline soda lakes. Extremophiles (2012) 0.83

Isolation and differentiation of methanogenic Archaea from mesophilic corn-fed on-farm biogas plants with special emphasis on the genus Methanobacterium. Appl Microbiol Biotechnol (2014) 0.82

Citreicella thiooxidans gen. nov., sp. nov., a novel lithoheterotrophic sulfur-oxidizing bacterium from the Black Sea. Syst Appl Microbiol (2005) 0.81

Desulfonatronovibrio halophilus sp. nov., a novel moderately halophilic sulfate-reducing bacterium from hypersaline chloride-sulfate lakes in Central Asia. Extremophiles (2012) 0.79

Isolation and characterization of two novel alkalitolerant sulfidogens from a Thiopaq bioreactor, Desulfonatronum alkalitolerans sp. nov., and Sulfurospirillum alkalitolerans sp. nov. Extremophiles (2013) 0.78

Heterotrophic denitrification at extremely high salt and pH by haloalkaliphilic Gammaproteobacteria from hypersaline soda lakes. Extremophiles (2008) 0.78

Stable sulfur isotope fractionation during the reduction of thiosulfate by Dethiosulfovibrio russensis. Arch Microbiol (2000) 0.78

Differentiation of species of the genus Saccharomyces using biomolecular fingerprinting methods. Appl Microbiol Biotechnol (2013) 0.78

Utilization of arylaliphatic nitriles by haloalkaliphilic Halomonas nitrilicus sp. nov. isolated from soda soils. Appl Microbiol Biotechnol (2008) 0.76

Biological removal of NOx from flue gas. Water Sci Technol (2004) 0.76

Bacterial dissimilatory MnO(2) reduction at extremely haloalkaline conditions. Extremophiles (2009) 0.75

Sulfate reduction at pH 4 during the thermophilic (55 degrees C) acidification of sucrose in UASB reactors. Biotechnol Prog (2009) 0.75