Structural Mechanism for Light-driven Transport by a New Type of Chloride Ion Pump, Nonlabens marinus Rhodopsin-3.

PubWeight™: 0.75‹?›

🔗 View Article (PMID 27365396)

Published in J Biol Chem on June 30, 2016

Authors

Toshiaki Hosaka1, Susumu Yoshizawa2, Yu Nakajima2, Noboru Ohsawa1, Masakatsu Hato1, Edward F DeLong3, Kazuhiro Kogure2, Shigeyuki Yokoyama4, Tomomi Kimura-Someya1, Wataru Iwasaki5, Mikako Shirouzu6

Author Affiliations

1: From the Division of Structural and Synthetic Biology, RIKEN Center for Life Science Technologies, and.
2: the Atmosphere and Ocean Research Institute, University of Tokyo, Chiba 277-8564, Japan.
3: the Center for Microbial Oceanography, Research and Education, University of Hawaii, Honolulu, Hawaii 96822, and.
4: RIKEN Structural Biology Laboratory, Yokohama, Kanagawa 230-0045, Japan.
5: the Atmosphere and Ocean Research Institute, University of Tokyo, Chiba 277-8564, Japan, the Department of Biological Sciences, Graduate School of Science, University of Tokyo, Tokyo 113-0032, Japan iwasaki@bs.s.u-tokyo.ac.jp.
6: From the Division of Structural and Synthetic Biology, RIKEN Center for Life Science Technologies, and mikako.shirouzu@riken.jp.

Articles cited by this

Coot: model-building tools for molecular graphics. Acta Crystallogr D Biol Crystallogr (2004) 227.01

PHENIX: a comprehensive Python-based system for macromolecular structure solution. Acta Crystallogr D Biol Crystallogr (2010) 108.52

Phaser crystallographic software. J Appl Crystallogr (2007) 108.34

XDS. Acta Crystallogr D Biol Crystallogr (2010) 67.46

Rhodopsin-like protein from the purple membrane of Halobacterium halobium. Nat New Biol (1971) 14.93

Bacterial rhodopsin: evidence for a new type of phototrophy in the sea. Science (2000) 10.82

Structure of bacteriorhodopsin at 1.55 A resolution. J Mol Biol (1999) 8.17

Structure of the light-driven chloride pump halorhodopsin at 1.8 A resolution. Science (2000) 3.93

Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea. Nature (2006) 3.27

Halorhodopsin is a light-driven chloride pump. J Biol Chem (1982) 3.24

Aspartic acid-96 is the internal proton donor in the reprotonation of the Schiff base of bacteriorhodopsin. Proc Natl Acad Sci U S A (1989) 3.06

The microbial opsin family of optogenetic tools. Cell (2011) 2.94

Bacteriorhodopsin. Annu Rev Physiol (2004) 2.61

Two possible roles of bacteriorhodopsin; a comparative study of strains of Halobacterium halobium differing in pigmentation. Biochem Biophys Res Commun (1977) 2.44

Preparation of Escherichia coli cell extract for highly productive cell-free protein expression. J Struct Funct Genomics (2004) 2.14

Microbial and animal rhodopsins: structures, functions, and molecular mechanisms. Chem Rev (2013) 1.93

Proton transfers in the bacteriorhodopsin photocycle. Biochim Biophys Acta (2005) 1.90

Leptosphaeria rhodopsin: bacteriorhodopsin-like proton pump from a eukaryote. Proc Natl Acad Sci U S A (2005) 1.75

Crystal structure of a light-driven sodium pump. Nat Struct Mol Biol (2015) 1.67

Spectroscopic and photochemical characterization of a deep ocean proteorhodopsin. J Biol Chem (2003) 1.43

A light-driven sodium ion pump in marine bacteria. Nat Commun (2013) 1.38

Proton transport by proteorhodopsin requires that the retinal Schiff base counterion Asp-97 be anionic. Biochemistry (2003) 1.23

A bacterial proteorhodopsin proton pump in marine eukaryotes. Nat Commun (2011) 1.17

Functional characterization of flavobacteria rhodopsins reveals a unique class of light-driven chloride pump in bacteria. Proc Natl Acad Sci U S A (2014) 1.16

Halorhodopsin: light-driven ion pumping made simple? Curr Opin Struct Biol (2002) 1.11

Role of putative anion-binding sites in cytoplasmic and extracellular channels of Natronomonas pharaonis halorhodopsin. Biochemistry (2005) 1.06

Structural basis for Na(+) transport mechanism by a light-driven Na(+) pump. Nature (2015) 1.05

Crystal structure of the light-driven chloride pump halorhodopsin from Natronomonas pharaonis. J Mol Biol (2009) 1.04

Light-driven ion-translocating rhodopsins in marine bacteria. Trends Microbiol (2015) 0.99

Production of functional bacteriorhodopsin by an Escherichia coli cell-free protein synthesis system supplemented with steroid detergent and lipid. Protein Sci (2009) 0.95

A new manual dispensing system for in meso membrane protein crystallization with using a stepping motor-based dispenser. J Struct Funct Genomics (2014) 0.80

Role of Arg123 in light-driven anion pump mechanisms of pharaonis halorhodopsin. Photochem Photobiol (2009) 0.80

Structural basis for the slow photocycle and late proton release in Acetabularia rhodopsin I from the marine plant Acetabularia acetabulum. Acta Crystallogr D Biol Crystallogr (2015) 0.80

Ser-130 of Natronobacterium pharaonis halorhodopsin is important for the chloride binding. Biophys Chem (2003) 0.80