Published in Rep Biochem Mol Biol on April 01, 2016
Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features. Biopolymers (1983) 99.69
The Pfam protein families database. Nucleic Acids Res (2002) 51.34
The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling. Bioinformatics (2005) 34.83
Protein structure prediction on the Web: a case study using the Phyre server. Nat Protoc (2009) 32.64
Calculation of protein extinction coefficients from amino acid sequence data. Anal Biochem (1989) 29.15
Comparative protein structure modeling of genes and genomes. Annu Rev Biophys Biomol Struct (2000) 17.81
Quorum sensing in bacteria: the LuxR-LuxI family of cell density-responsive transcriptional regulators. J Bacteriol (1994) 17.55
The relation between the divergence of sequence and structure in proteins. EMBO J (1986) 16.66
DrugBank: a knowledgebase for drugs, drug actions and drug targets. Nucleic Acids Res (2007) 13.94
Quorum sensing: cell-to-cell communication in bacteria. Annu Rev Cell Dev Biol (2005) 13.88
Protein structure prediction and structural genomics. Science (2001) 11.76
GenBank. Nucleic Acids Res (2009) 11.11
Twilight zone of protein sequence alignments. Protein Eng (1999) 9.83
ProSA-web: interactive web service for the recognition of errors in three-dimensional structures of proteins. Nucleic Acids Res (2007) 9.16
Verification of protein structures: patterns of nonbonded atomic interactions. Protein Sci (1993) 7.90
Diffusion of autoinducer is involved in regulation of the Vibrio fischeri luminescence system. J Bacteriol (1985) 7.79
Bacterial bioluminescence: its control and ecological significance. Microbiol Rev (1979) 6.89
Listening in on bacteria: acyl-homoserine lactone signalling. Nat Rev Mol Cell Biol (2002) 6.01
Bacterially speaking. Cell (2006) 6.01
SCRATCH: a protein structure and structural feature prediction server. Nucleic Acids Res (2005) 5.59
Protein structure homology modeling using SWISS-MODEL workspace. Nat Protoc (2009) 5.42
Toward the estimation of the absolute quality of individual protein structure models. Bioinformatics (2010) 5.08
Enzymatic synthesis of a quorum-sensing autoinducer through use of defined substrates. Science (1996) 4.86
Large-scale protein structure modeling of the Saccharomyces cerevisiae genome. Proc Natl Acad Sci U S A (1998) 4.17
Nucleotide sequence of the regulatory locus controlling expression of bacterial genes for bioluminescence. Nucleic Acids Res (1987) 4.12
QMEAN server for protein model quality estimation. Nucleic Acids Res (2009) 3.39
Lessons from a cooperative, bacterial-animal association: the Vibrio fischeri-Euprymna scolopes light organ symbiosis. Annu Rev Microbiol (1996) 3.26
Effective energy functions for protein structure prediction. Curr Opin Struct Biol (2000) 2.92
Correlation between stability of a protein and its dipeptide composition: a novel approach for predicting in vivo stability of a protein from its primary sequence. Protein Eng (1990) 2.73
EVA: Evaluation of protein structure prediction servers. Nucleic Acids Res (2003) 2.50
Data deposition and annotation at the worldwide protein data bank. Mol Biotechnol (2008) 2.30
Bacterial social engagements. Trends Cell Biol (2004) 2.17
The PMDB Protein Model Database. Nucleic Acids Res (2006) 1.94
Structural basis and specificity of acyl-homoserine lactone signal production in bacterial quorum sensing. Mol Cell (2002) 1.92
Structure-based inhibitor design by using protein models for the development of antiparasitic agents. Proc Natl Acad Sci U S A (1993) 1.82
ANOLEA: a www server to assess protein structures. Proc Int Conf Intell Syst Mol Biol (1997) 1.61
Fold assessment for comparative protein structure modeling. Protein Sci (2007) 1.31
Site-directed mutagenesis of recombinant human beta 2-glycoprotein I identifies a cluster of lysine residues that are critical for phospholipid binding and anti-cardiolipin antibody activity. J Immunol (1996) 1.12
GalaxyWEB server for protein structure prediction and refinement. Nucleic Acids Res (2012) 1.08
Three-dimensional models of four mouse mast cell chymases. Identification of proteoglycan binding regions and protease-specific antigenic epitopes. J Biol Chem (1993) 1.01
What should the Z-score of native protein structures be? Protein Sci (1998) 0.88
Identification of five structurally unrelated quorum-sensing inhibitors of Pseudomonas aeruginosa from a natural-derivative database. Antimicrob Agents Chemother (2013) 0.83
Probing the specificity of a trypanosomal aromatic alpha-hydroxy acid dehydrogenase by site-directed mutagenesis. Biochem Biophys Res Commun (2002) 0.79