Published in MBio on September 27, 2016
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High levels of genetic recombination during nasopharyngeal carriage and biofilm formation in Streptococcus pneumoniae. MBio (2012) 1.29
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Clonal replacement among 19A Streptococcus pneumoniae in Massachusetts, prior to 13 valent conjugate vaccination. Vaccine (2011) 1.22
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High levels of recombination among Streptococcus pneumoniae isolates from the Gambia. MBio (2011) 1.08
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Genetic characterisation of Malawian pneumococci prior to the roll-out of the PCV13 vaccine using a high-throughput whole genome sequencing approach. PLoS One (2012) 1.03
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Mechanisms of genome evolution of Streptococcus. Infect Genet Evol (2014) 0.92
High multiple carriage and emergence of Streptococcus pneumoniae vaccine serotype variants in Malawian children. BMC Infect Dis (2015) 0.90
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Mechanisms and impact of genetic recombination in the evolution of Streptococcus pneumoniae. Comput Struct Biotechnol J (2015) 0.80
Expanding the biotechnology potential of lactobacilli through comparative genomics of 213 strains and associated genera. Nat Commun (2015) 1.22
A shared population of epidemic methicillin-resistant Staphylococcus aureus 15 circulates in humans and companion animals. MBio (2014) 1.07
Systematic longitudinal survey of invasive Escherichia coli in England demonstrates a stable population structure only transiently disturbed by the emergence of ST131. Genome Res (2017) 1.07
Development of a Multiplex PCR Assay for Rapid Molecular Serotyping of Haemophilus parasuis. J Clin Microbiol (2015) 1.06
Whole-genome sequencing confirms that Burkholderia pseudomallei multilocus sequence types common to both Cambodia and Australia are due to homoplasy. J Clin Microbiol (2014) 1.05
Recurrence due to relapse or reinfection with Mycobacterium tuberculosis: a whole-genome sequencing approach in a large, population-based cohort with a high HIV infection prevalence and active follow-up. J Infect Dis (2014) 1.05
Rapid emergence of multidrug resistant, H58-lineage Salmonella typhi in Blantyre, Malawi. PLoS Negl Trop Dis (2015) 1.02
Time between collection and storage significantly influences bacterial sequence composition in sputum samples from cystic fibrosis respiratory infections. J Clin Microbiol (2014) 1.02
Circulating Pneumolysin Is a Potent Inducer of Cardiac Injury during Pneumococcal Infection. PLoS Pathog (2015) 0.92
Microevolution of Burkholderia pseudomallei during an acute infection. J Clin Microbiol (2014) 0.92
Whole Genome Sequencing Shows a Low Proportion of Tuberculosis Disease Is Attributable to Known Close Contacts in Rural Malawi. PLoS One (2015) 0.92
Genomic perspectives on the evolution and spread of bacterial pathogens. Proc Biol Sci (2015) 0.92
Whole-Genome Sequencing for Routine Pathogen Surveillance in Public Health: a Population Snapshot of Invasive Staphylococcus aureus in Europe. MBio (2016) 0.91
Genomic Analysis and Comparison of Two Gonorrhea Outbreaks. MBio (2016) 0.91
Global phylogenomic analysis of nonencapsulated Streptococcus pneumoniae reveals a deep-branching classic lineage that is distinct from multiple sporadic lineages. Genome Biol Evol (2014) 0.89
Complete Genome Sequence of Bordetella pertussis D420. Genome Announc (2015) 0.87
Global phylogeography and evolutionary history of Shigella dysenteriae type 1. Nat Microbiol (2016) 0.86
Evaluation of an Optimal Epidemiological Typing Scheme for Legionella pneumophila with Whole-Genome Sequence Data Using Validation Guidelines. J Clin Microbiol (2016) 0.85
Sequence element enrichment analysis to determine the genetic basis of bacterial phenotypes. Nat Commun (2016) 0.83
Emergence of host-adapted Salmonella Enteritidis through rapid evolution in an immunocompromised host. Nat Microbiol (2016) 0.83
Mycobacterium abscessus Complex Identification with Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry. J Clin Microbiol (2015) 0.83
Staphylococcus aureus adapts to oxidative stress by producing H2O2-resistant small-colony variants via the SOS response. Infect Immun (2015) 0.82
Wild-Type and Non-Wild-Type Mycobacterium tuberculosis MIC Distributions for the Novel Fluoroquinolone Antofloxacin Compared with Those for Ofloxacin, Levofloxacin, and Moxifloxacin. Antimicrob Agents Chemother (2016) 0.80
Erratum for Boinett et al., Complete Genome Sequence of Bordetella pertussis D420. Genome Announc (2015) 0.80
Global and regional dissemination and evolution of Burkholderia pseudomallei. Nat Microbiol (2017) 0.78
Genomic Dissection of an Icelandic Epidemic of Respiratory Disease in Horses and Associated Zoonotic Cases. MBio (2017) 0.78
Whole Genome Sequence Analysis of a Large Isoniazid-Resistant Tuberculosis Outbreak in London: A Retrospective Observational Study. PLoS Med (2016) 0.78
dfrA thyA Double Deletion in para-Aminosalicylic Acid-Resistant Mycobacterium tuberculosis Beijing Strains. Antimicrob Agents Chemother (2016) 0.77
Old Drugs To Treat Resistant Bugs: Methicillin-Resistant Staphylococcus aureus Isolates with mecC Are Susceptible to a Combination of Penicillin and Clavulanic Acid. Antimicrob Agents Chemother (2015) 0.77
Comparative Genomic Analysis of Meningitis- and Bacteremia-Causing Pneumococci Identifies a Common Core Genome. Infect Immun (2015) 0.77
Complete Genome Sequence of Plesiomonas shigelloides Type Strain NCTC10360. Genome Announc (2016) 0.75
Complete Genome Sequence of Neisseria weaveri Strain NCTC13585. Genome Announc (2016) 0.75
Complete Whole-Genome Sequence of Salmonella enterica subsp. enterica Serovar Java NCTC5706. Genome Announc (2016) 0.75
Draft Genome Sequence of a Multiresistant Bovine Isolate of Staphylococcus lentus from Tanzania. Genome Announc (2016) 0.75
Draft Genome Sequence of 24570, the Type Strain of Shigella flexneri. Genome Announc (2015) 0.75
Within-Host Sampling of a Natural Population Shows Signs of Selection on Pde1 during Bacterial Meningitis. Infect Immun (2017) 0.75
Understanding pneumococcal serotype 1 biology through population genomic analysis. BMC Infect Dis (2016) 0.75
Some Synonymous and Nonsynonymous gyrA Mutations in Mycobacterium tuberculosis Lead to Systematic False-Positive Fluoroquinolone Resistance Results with the Hain GenoType MTBDRsl Assays. Antimicrob Agents Chemother (2017) 0.75
Genomic Analysis of Salmonella enterica Serovar Typhimurium from Wild Passerines in England and Wales. Appl Environ Microbiol (2016) 0.75
What's in a Name? Species-Wide Whole-Genome Sequencing Resolves Invasive and Noninvasive Lineages of Salmonella enterica Serotype Paratyphi B. MBio (2016) 0.75
Evolution and Epidemiology of Multidrug-Resistant Klebsiella pneumoniae in the United Kingdom and Ireland. MBio (2017) 0.75
The B lymphocyte differentiation factor (BAFF) is expressed in the airways of children with CF and in lungs of mice infected with Pseudomonas aeruginosa. PLoS One (2014) 0.75
Genomic epidemiology of penicillin non-susceptible pneumococci with non-vaccine serotypes causing invasive disease in the USA. J Clin Microbiol (2017) 0.75
Draft Genome Sequence of the Streptococcus pneumoniae Avery Strain A66. Genome Announc (2015) 0.75
Reclassification of the specialized metabolite producer Pseudomonas mesoacidophila ATCC 31433 as a member of the Burkholderia cepacia complex. J Bacteriol (2017) 0.75
Role of alanine racemase mutations in Mycobacterium tuberculosis D-cycloserine resistance. Antimicrob Agents Chemother (2017) 0.75
The dissemination of multidrug-resistant Enterobacter cloacae throughout the UK and Ireland. Nat Microbiol (2016) 0.75
Genomic history of the seventh pandemic of cholera in Africa. Science (2017) 0.75
A dual transacylation mechanism for polyketide synthase chain release in enacyloxin antibiotic biosynthesis. Nat Chem (2019) 0.75
A decade of advances in transposon-insertion sequencing. Nat Rev Genet (2020) 0.75
Longitudinal genomic surveillance of MRSA in the UK reveals transmission patterns in hospitals and the community. Sci Transl Med (2017) 0.75
Genomic surveillance reveals low prevalence of livestock-associated methicillin-resistant Staphylococcus aureus in the East of England. Sci Rep (2017) 0.75
A longitudinal study of the infant nasopharyngeal microbiota: The effects of age, illness and antibiotic use in a cohort of South East Asian children. PLoS Negl Trop Dis (2017) 0.75
Dynamics and impact of homologous recombination on the evolution of Legionella pneumophila. PLoS Genet (2017) 0.75
Genomic identification of cryptic susceptibility to penicillins and β-lactamase inhibitors in methicillin-resistant Staphylococcus aureus. Nat Microbiol (2019) 0.75
Community outbreaks of group A Streptococcus revealed by genome sequencing. Sci Rep (2017) 0.75
Integrated view of Vibrio cholerae in the Americas. Science (2017) 0.75