Published in Front Immunol on February 02, 2017
Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res (2003) 103.76
affy--analysis of Affymetrix GeneChip data at the probe level. Bioinformatics (2004) 32.08
The Database of Interacting Proteins: 2004 update. Nucleic Acids Res (2004) 23.67
BioGRID: a general repository for interaction datasets. Nucleic Acids Res (2006) 22.41
Human Protein Reference Database--2009 update. Nucleic Acids Res (2008) 21.25
BIND: the Biomolecular Interaction Network Database. Nucleic Acids Res (2003) 18.75
limma powers differential expression analyses for RNA-sequencing and microarray studies. Nucleic Acids Res (2015) 14.81
Evolving concepts of rheumatoid arthritis. Nature (2003) 14.31
PID: the Pathway Interaction Database. Nucleic Acids Res (2008) 12.92
The pathogenesis of rheumatoid arthritis. N Engl J Med (2011) 12.16
Bone resorption by osteoclasts. Science (2000) 11.68
Activities at the Universal Protein Resource (UniProt). Nucleic Acids Res (2013) 11.67
Pathway Commons, a web resource for biological pathway data. Nucleic Acids Res (2010) 9.18
The Reactome pathway knowledgebase. Nucleic Acids Res (2013) 8.56
PANTHER in 2013: modeling the evolution of gene function, and other gene attributes, in the context of phylogenetic trees. Nucleic Acids Res (2012) 8.54
Cytokines in the pathogenesis of rheumatoid arthritis. Nat Rev Immunol (2007) 8.47
WikiPathways: pathway editing for the people. PLoS Biol (2008) 8.13
PhosphoSitePlus: a comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse. Nucleic Acids Res (2011) 7.84
Computational prediction of human metabolic pathways from the complete human genome. Genome Biol (2004) 7.52
Combining probability from independent tests: the weighted Z-method is superior to Fisher's approach. J Evol Biol (2005) 7.46
The ChEBI reference database and ontology for biologically relevant chemistry: enhancements for 2013. Nucleic Acids Res (2012) 6.90
Characterizing the quantitative genetic contribution to rheumatoid arthritis using data from twins. Arthritis Rheum (2000) 6.88
DrugBank 4.0: shedding new light on drug metabolism. Nucleic Acids Res (2013) 6.73
New therapies for treatment of rheumatoid arthritis. Lancet (2007) 4.80
Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool. BMC Bioinformatics (2013) 4.73
A human functional protein interaction network and its application to cancer data analysis. Genome Biol (2010) 4.73
CORUM: the comprehensive resource of mammalian protein complexes--2009. Nucleic Acids Res (2009) 4.71
The MIntAct project--IntAct as a common curation platform for 11 molecular interaction databases. Nucleic Acids Res (2013) 4.39
miRTarBase update 2014: an information resource for experimentally validated miRNA-target interactions. Nucleic Acids Res (2013) 4.19
A community-driven global reconstruction of human metabolism. Nat Biotechnol (2013) 3.89
Therapeutic strategies for rheumatoid arthritis. Nat Rev Drug Discov (2003) 3.51
The influence of HLA-DRB1 genes on disease severity in rheumatoid arthritis. Ann Intern Med (1992) 3.36
Anti-interleukin-6 receptor antibody therapy reduces vascular endothelial growth factor production in rheumatoid arthritis. Arthritis Rheum (2003) 3.29
The TRANSFAC project as an example of framework technology that supports the analysis of genomic regulation. Brief Bioinform (2008) 2.85
A comparison of meta-analysis methods for detecting differentially expressed genes in microarray experiments. Bioinformatics (2008) 2.62
NetPath: a public resource of curated signal transduction pathways. Genome Biol (2010) 2.62
The Comparative Toxicogenomics Database's 10th year anniversary: update 2015. Nucleic Acids Res (2014) 2.55
Anti-TNF-alpha therapy induces a distinct regulatory T cell population in patients with rheumatoid arthritis via TGF-beta. J Exp Med (2007) 2.47
Understanding the dynamics: pathways involved in the pathogenesis of rheumatoid arthritis. Rheumatology (Oxford) (2012) 2.38
UniChem: a unified chemical structure cross-referencing and identifier tracking system. J Cheminform (2013) 2.23
Angiogenesis in rheumatoid arthritis. Arthritis Res (2002) 1.58
Roles of B cells in rheumatoid arthritis. Arthritis Res Ther (2003) 1.57
The consequences of rheumatoid arthritis: quality of life measures in the individual patient. Clin Exp Rheumatol (2005) 1.51
Angiogenesis as a target in rheumatoid arthritis. Ann Rheum Dis (2003) 1.49
Vaccine activation of the nutrient sensor GCN2 in dendritic cells enhances antigen presentation. Science (2013) 1.46
SMPDB 2.0: big improvements to the Small Molecule Pathway Database. Nucleic Acids Res (2013) 1.29
The role of interleukin-17 in the pathogenesis of rheumatoid arthritis. Curr Rheumatol Rep (2009) 1.27
Epidemiological and clinical aspects relating to the variability of rheumatoid arthritis. Semin Arthritis Rheum (1997) 1.25
Functional characterization of HLA-F and binding of HLA-F tetramers to ILT2 and ILT4 receptors. Eur J Immunol (2000) 1.24
DNA microarray allows molecular profiling of rheumatoid arthritis and identification of pathophysiological targets. Genes Immun (2004) 1.20
Precise generation of systems biology models from KEGG pathways. BMC Syst Biol (2013) 1.11
A novel 4EHP-GIGYF2 translational repressor complex is essential for mammalian development. Mol Cell Biol (2012) 1.09
Molecular signatures and new candidates to target the pathogenesis of rheumatoid arthritis. Physiol Genomics (2010) 1.07
Cutting edge: AIM2 and endosomal TLRs differentially regulate arthritis and autoantibody production in DNase II-deficient mice. J Immunol (2014) 1.01
CYFIP2, a direct p53 target, is leptomycin-B sensitive. Cell Cycle (2007) 1.01
Identification of intra-group, inter-individual, and gene-specific variances in mRNA expression profiles in the rheumatoid arthritis synovial membrane. Arthritis Res Ther (2008) 1.00
Peripheral blood derived gene panels predict response to infliximab in rheumatoid arthritis and Crohn's disease. Genome Med (2013) 0.92
Prevalence of rheumatoid arthritis in low- and middle-income countries: A systematic review and analysis. J Glob Health (2015) 0.92
The link of biocompatibility to cytokine production. Kidney Int Suppl (2000) 0.89
Cancer cells exploit eIF4E2-directed synthesis of hypoxia response proteins to drive tumor progression. Cancer Res (2014) 0.86
PILRα negatively regulates mouse inflammatory arthritis. J Immunol (2014) 0.84
INOH: ontology-based highly structured database of signal transduction pathways. Database (Oxford) (2011) 0.83
Peripheral blood gene expression and IgG glycosylation profiles as markers of tocilizumab treatment in rheumatoid arthritis. J Rheumatol (2012) 0.83
Identification of rheumatoid arthritis and osteoarthritis patients by transcriptome-based rule set generation. Arthritis Res Ther (2014) 0.82
Clinical implication of human leukocyte antigen (HLA)-F expression in breast cancer. Pathol Int (2015) 0.81
Connecting two pathways through Ca 2+ signaling: NLRP3 inflammasome activation induced by a hypermorphic PLCG2 mutation. Arthritis Rheumatol (2015) 0.80
5-Lipoxygenase inhibitors attenuate TNF-α-induced inflammation in human synovial fibroblasts. PLoS One (2014) 0.80
Identification of human leucocyte antigen (HLA)-A*0201-restricted cytotoxic T lymphocyte epitopes derived from HLA-DOβ as a novel target for multiple myeloma. Br J Haematol (2013) 0.77
Phosphorylation of serine 523 on 5-lipoxygenase in human B lymphocytes. Prostaglandins Leukot Essent Fatty Acids (2015) 0.76
The impact of lymphocyte isolation on induced DNA damage in human blood samples measured by the comet assay. Mutagenesis (2016) 0.76
Post-transcriptional Regulation of Immunological Responses through Riboclustering. Front Immunol (2016) 0.75