Tissue and time specific expression pattern of interferon regulated genes in the chicken.

PubWeight™: 0.75‹?›

🔗 View Article (PMID 28351377)

Published in BMC Genomics on March 28, 2017

Authors

Susanne Röll1, Stefan Härtle2, Thomas Lütteke1,3, Bernd Kaspers1, Sonja Härtle4,5

Author Affiliations

1: Department for Veterinary Science, University of Munich, Munich, Germany.
2: formerly Department for Veterinary Science, University of Munich, Munich, Germany.
3: Institute of Veterinary Physiology and Biochemistry, JLU Giessen, Giessen, Germany.
4: Department for Veterinary Science, University of Munich, Munich, Germany. Sonja.Haertle@lmu.de.
5: Institute of Veterinary Physiology and Biochemistry, JLU Giessen, Giessen, Germany. Sonja.Haertle@lmu.de.

Articles cited by this

Significance analysis of microarrays applied to the ionizing radiation response. Proc Natl Acad Sci U S A (2001) 132.88

KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res (2000) 117.00

TM4: a free, open-source system for microarray data management and analysis. Biotechniques (2003) 38.02

How cells respond to interferons. Annu Rev Biochem (1998) 24.27

Variance stabilization applied to microarray data calibration and to the quantification of differential expression. Bioinformatics (2002) 20.59

TM4 microarray software suite. Methods Enzymol (2006) 13.78

Identification of genes differentially regulated by interferon alpha, beta, or gamma using oligonucleotide arrays. Proc Natl Acad Sci U S A (1998) 13.39

A diverse range of gene products are effectors of the type I interferon antiviral response. Nature (2011) 12.86

PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium. Nucleic Acids Res (2009) 9.14

Evaluation of a soluble tetrazolium/formazan assay for cell growth and drug sensitivity in culture using human and other tumor cell lines. Cancer Res (1988) 8.53

PANTHER: a browsable database of gene products organized by biological function, using curated protein family and subfamily classification. Nucleic Acids Res (2003) 7.21

Interferons, interferon-like cytokines, and their receptors. Immunol Rev (2004) 6.21

Functional classification of interferon-stimulated genes identified using microarrays. J Leukoc Biol (2001) 6.19

The interferon response circuit: induction and suppression by pathogenic viruses. Virology (2006) 4.56

Interferon signalling network in innate defence. Cell Microbiol (2006) 3.90

Pentraxins at the crossroads between innate immunity, inflammation, matrix deposition, and female fertility. Annu Rev Immunol (2005) 3.48

Interferon-stimulated genes: a complex web of host defenses. Annu Rev Immunol (2014) 3.47

PerlPrimer: cross-platform, graphical primer design for standard, bisulphite and real-time PCR. Bioinformatics (2004) 3.44

Interferon-stimulated genes and their antiviral effector functions. Curr Opin Virol (2011) 3.44

A single DNA response element can confer inducibility by both alpha- and gamma-interferons. Proc Natl Acad Sci U S A (1989) 3.33

Phosphoinositide 3-kinase signalling pathways. J Cell Sci (2001) 3.24

Organization of the murine Mx gene and characterization of its interferon- and virus-inducible promoter. Mol Cell Biol (1988) 3.19

Non-redundant role of the long pentraxin PTX3 in anti-fungal innate immune response. Nature (2002) 3.01

Interferon-induced mx proteins: dynamin-like GTPases with antiviral activity. Traffic (2002) 2.44

INTERFEROME: the database of interferon regulated genes. Nucleic Acids Res (2008) 2.31

Polymorphisms and the differential antiviral activity of the chicken Mx gene. Genome Res (2002) 2.18

Type I interferon receptors: biochemistry and biological functions. J Biol Chem (2007) 2.14

Human intracellular ISG15 prevents interferon-α/β over-amplification and auto-inflammation. Nature (2014) 2.10

Interferon-gamma: a historical perspective. Cytokine Growth Factor Rev (2009) 2.03

Association of RIG-I with innate immunity of ducks to influenza. Proc Natl Acad Sci U S A (2010) 1.98

Induction and function of type I and III interferon in response to viral infection. Curr Opin Virol (2011) 1.61

Interleukin-22: immunobiology and pathology. Annu Rev Immunol (2015) 1.60

Antiviral activity of the long chain pentraxin PTX3 against influenza viruses. J Immunol (2008) 1.39

The interferon-induced Mx protein of chickens lacks antiviral activity. J Interferon Cytokine Res (1995) 1.25

PTX3 function as an opsonin for the dectin-1-dependent internalization of zymosan by macrophages. J Leukoc Biol (2004) 1.16

A virological view of innate immune recognition. Annu Rev Microbiol (2012) 1.14

The chicken Mx promoter contains an ISRE motif and confers interferon inducibility to a reporter gene in chick and monkey cells. Virology (1994) 1.11

Recombinant chicken interferon from Escherichia coli and transfected COS cells is biologically active. Eur J Biochem (1995) 1.11

Surfactant protein A inhibits alveolar macrophage cytokine production by CD14-independent pathway. Am J Physiol Lung Cell Mol Physiol (2003) 1.04

Antioxidant properties of albumin: effect on oxidative metabolism of human neutrophil granulocytes. Farmaco (1999) 1.00

Oxidative damage of albumin in advanced liver disease. Biochim Biophys Acta (2008) 0.98

A family of genes coding for two serologically distinct chicken interferons. J Biol Chem (1996) 0.97

Human serum albumin and its relation with oxidative stress. Clin Lab (2013) 0.96

Complement dependent amplification of the innate response to a cognate microbial ligand by the long pentraxin PTX3. J Immunol (2007) 0.94

TLR15 is unique to avian and reptilian lineages and recognizes a yeast-derived agonist. J Immunol (2012) 0.93

Pharmacokinetics of interferon alpha-2b in healthy volunteers. J Clin Pharmacol (1988) 0.90

Association of Mx1 Asn631 variant alleles with reductions in morbidity, early mortality, viral shedding, and cytokine responses in chickens infected with a highly pathogenic avian influenza virus. Immunogenetics (2011) 0.90

Highly pathogenic avian influenza viruses do not inhibit interferon synthesis in infected chickens but can override the interferon-induced antiviral state. J Virol (2011) 0.90

Insulin utilizes the PI 3-kinase pathway to inhibit SP-A gene expression in lung epithelial cells. Respir Res (2002) 0.89

IFNα converts IL-22 into a cytokine efficiently activating STAT1 and its downstream targets. Biochem Pharmacol (2012) 0.88

Mx is dispensable for interferon-mediated resistance of chicken cells against influenza A virus. J Virol (2011) 0.88

The interferon system of non-mammalian vertebrates. Dev Comp Immunol (2004) 0.87

Regulation of immune pathways by the NOD-like receptor NLRC5. Immunobiology (2011) 0.87

TNF-alpha inhibits SP-A gene expression in lung epithelial cells via p38 MAPK. Am J Physiol Lung Cell Mol Physiol (2002) 0.86

Transcriptional profiling of host gene expression in chicken embryo lung cells infected with laryngotracheitis virus. BMC Genomics (2010) 0.86

Cooperative binding of Stat1-2 heterodimers and ISGF3 to tandem DNA elements. Biochimie (1999) 0.85

USP18 negatively regulates NF-κB signaling by targeting TAK1 and NEMO for deubiquitination through distinct mechanisms. Sci Rep (2015) 0.83

Glycoprotein biosynthesis during the acute-phase response to inflammation. Can J Biochem Cell Biol (1983) 0.83

REFINEMENT: a search framework for the identification of interferon-responsive elements in DNA sequences--a case study with ISRE and GAS. Comput Biol Chem (2006) 0.82

Loss of RIG-I leads to a functional replacement with MDA5 in the Chinese tree shrew. Proc Natl Acad Sci U S A (2016) 0.81

Recovery of monocytes after bone marrow transplantation--rapid reappearance of tumor necrosis factor alpha and interleukin 6 production. Transplantation (1991) 0.80

Analysis of the early immune response to infection by infectious bursal disease virus in chickens differing in their resistance to the disease. J Virol (2014) 0.79

Transcriptional expression levels of chicken collectins are affected by avian influenza A virus inoculation. Vet Microbiol (2009) 0.78

Type III interferons (IFNs): Emerging Master Regulators of Immunity. Adv Exp Med Biol (2015) 0.78

Characterisation of chicken ZAP. Dev Comp Immunol (2014) 0.77

Characterisation of chicken viperin. Mol Immunol (2014) 0.77

Newcastle Disease Viruses Causing Recent Outbreaks Worldwide Show Unexpectedly High Genetic Similarity to Historical Virulent Isolates from the 1940s. J Clin Microbiol (2016) 0.77

Chicken interferome: avian interferon-stimulated genes identified by microarray and RNA-seq of primary chick embryo fibroblasts treated with a chicken type I interferon (IFN-α). Vet Res (2016) 0.76

Interferon standards: a memorandum. J Biol Stand (1979) 0.76