Published in J Comput Aided Mol Des on April 01, 2017
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res (1997) 665.31
A simple method for displaying the hydropathic character of a protein. J Mol Biol (1982) 150.65
Protein secondary structure prediction based on position-specific scoring matrices. J Mol Biol (1999) 33.07
Empirical predictions of protein conformation. Annu Rev Biochem (1978) 25.48
Principles that govern the folding of protein chains. Science (1973) 23.40
UniRef: comprehensive and non-redundant UniProt reference clusters. Bioinformatics (2007) 17.43
Protein translation and folding are coupled by an endoplasmic-reticulum-resident kinase. Nature (1999) 16.97
Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm. J Mol Biol (1999) 11.38
IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content. Bioinformatics (2005) 9.02
Protein disorder prediction: implications for structural proteomics. Structure (2003) 7.93
Why are "natively unfolded" proteins unstructured under physiologic conditions? Proteins (2000) 7.61
Sequence complexity of disordered protein. Proteins (2001) 6.97
Intrinsically disordered proteins in human diseases: introducing the D2 concept. Annu Rev Biophys (2008) 3.98
Functional classification of proteins for the prediction of cellular function from a protein-protein interaction network. Genome Biol (2003) 3.80
Length-dependent prediction of protein intrinsic disorder. BMC Bioinformatics (2006) 3.70
Intrinsically disordered proteins in cellular signalling and regulation. Nat Rev Mol Cell Biol (2015) 2.69
Prediction of protein binding regions in disordered proteins. PLoS Comput Biol (2009) 2.69
Amyloid-like features of polyglutamine aggregates and their assembly kinetics. Biochemistry (2002) 2.59
Protein disorder and the evolution of molecular recognition: theory, predictions and observations. Pac Symp Biocomput (1998) 2.37
Net charge per residue modulates conformational ensembles of intrinsically disordered proteins. Proc Natl Acad Sci U S A (2010) 2.16
Disulfide bonds and the stability of globular proteins. Protein Sci (1993) 1.90
What makes a protein a protein? Hydrophobic core designs that specify stability and structural properties. Protein Sci (1996) 1.76
Proline and glycine control protein self-organization into elastomeric or amyloid fibrils. Structure (2006) 1.69
MoRFpred, a computational tool for sequence-based prediction and characterization of short disorder-to-order transitioning binding regions in proteins. Bioinformatics (2012) 1.49
Unusual biophysics of intrinsically disordered proteins. Biochim Biophys Acta (2012) 1.48
DISOPRED3: precise disordered region predictions with annotated protein-binding activity. Bioinformatics (2014) 1.46
Natively unstructured regions in proteins identified from contact predictions. Bioinformatics (2007) 1.45
Constructing ensembles for intrinsically disordered proteins. Curr Opin Struct Biol (2011) 1.44
POODLE-S: web application for predicting protein disorder by using physicochemical features and reduced amino acid set of a position-specific scoring matrix. Bioinformatics (2007) 1.41
Serine/arginine-rich splicing factors belong to a class of intrinsically disordered proteins. Nucleic Acids Res (2006) 1.39
Multitude of binding modes attainable by intrinsically disordered proteins: a portrait gallery of disorder-based complexes. Chem Soc Rev (2010) 1.26
Prokink: a protocol for numerical evaluation of helix distortions by proline. Protein Eng (2000) 1.24
IDEAL: Intrinsically Disordered proteins with Extensive Annotations and Literature. Nucleic Acids Res (2011) 1.23
Protein tandem repeats - the more perfect, the less structured. FEBS J (2010) 1.15
Functional classification of proteins and protein variants. Proc Natl Acad Sci U S A (2004) 1.07
MFSPSSMpred: identifying short disorder-to-order binding regions in disordered proteins based on contextual local evolutionary conservation. BMC Bioinformatics (2013) 0.94
How sequence determines elasticity of disordered proteins. Biophys J (2010) 0.94
Intrinsically disordered proteins may escape unwanted interactions via functional misfolding. Biochim Biophys Acta (2011) 0.86
Coupled folding during translation initiation. Cell (2003) 0.82
Finding correct protein-protein docking models using ProQDock. Bioinformatics (2016) 0.79
Conformational Entropy of Intrinsically Disordered Proteins from Amino Acid Triads. Sci Rep (2015) 0.79
Applications of complementarity plot in error detection and structure validation of proteins. Indian J Biochem Biophys (2014) 0.78
Protein folding and the order/disorder paradox. J Cell Biochem (2011) 0.78
Intrinsically disordered energy landscapes. Sci Rep (2015) 0.78
Association between intrinsic disorder and serine/threonine phosphorylation in Mycobacterium tuberculosis. PeerJ (2015) 0.77
ProQ3: Improved model quality assessments using Rosetta energy terms. Sci Rep (2016) 0.77
Glycine rescue of β-sheets from cis-proline. J Am Chem Soc (2012) 0.76
ProQ3D: Improved model quality assessments using Deep Learning. Bioinformatics (2017) 0.76
Globular-disorder transition in proteins: a compromise between hydrophobic and electrostatic interactions? Phys Chem Chem Phys (2016) 0.75
DockQ: A Quality Measure for Protein-Protein Docking Models. PLoS One (2016) 0.76
Methods for estimation of model accuracy in CASP12. Proteins (2017) 0.75
InterPred: a pipeline to identify and model protein-protein interactions. Proteins (2017) 0.75