Transcription of simian virus 40 DNA by wheat germ RNA polymerase II. Priming of RNA synthesis by the 3'-hydroxyl of DNA at single strand nicks.

PubWeight™: 1.06‹?› | Rank: Top 15%

🔗 View Article (PMID 6246089)

Published in J Biol Chem on May 25, 1980

Authors

M K Lewis, R R Burgess

Articles by these authors

(truncated to the top 100)

A procedure for the rapid, large-scall purification of Escherichia coli DNA-dependent RNA polymerase involving Polymin P precipitation and DNA-cellulose chromatography. Biochemistry (1975) 16.43

Elution of proteins from sodium dodecyl sulfate-polyacrylamide gels, removal of sodium dodecyl sulfate, and renaturation of enzymatic activity: results with sigma subunit of Escherichia coli RNA polymerase, wheat germ DNA topoisomerase, and other enzymes. Anal Biochem (1980) 14.14

A new method for the large scale purification of Escherichia coli deoxyribonucleic acid-dependent ribonucleic acid polymerase. J Biol Chem (1969) 12.49

Factor stimulating transcription by RNA polymerase. Nature (1969) 9.27

Sigma factors from E. coli, B. subtilis, phage SP01, and phage T4 are homologous proteins. Nucleic Acids Res (1986) 7.28

The codon preference plot: graphic analysis of protein coding sequences and prediction of gene expression. Nucleic Acids Res (1984) 6.98

Purification and properties of the sigma subunit of Escherichia coli DNA-dependent RNA polymerase. Biochemistry (1979) 5.75

The operon that encodes the sigma subunit of RNA polymerase also encodes ribosomal protein S21 and DNA primase in E. coli K12. Cell (1983) 5.73

The nucleotide sequence of the cloned rpoD gene for the RNA polymerase sigma subunit from E coli K12. Nucleic Acids Res (1981) 5.52

Architecture of RNA polymerase II and implications for the transcription mechanism. Science (2000) 5.12

Separation and characterization of the subunits of ribonucleic acid polymerase. J Biol Chem (1969) 4.98

Inhibition of in vivo and in vitro transcription by monoclonal antibodies prepared against wheat germ RNA polymerase II that react with the heptapeptide repeat of eukaryotic RNA polymerase II. J Biol Chem (1989) 3.90

Transcription from a heat-inducible promoter causes heat shock regulation of the sigma subunit of E. coli RNA polymerase. Cell (1984) 3.10

Transcription of a gene for human U1 small nuclear RNA. Cell (1982) 2.93

RNA polymerase. Annu Rev Biochem (1971) 2.54

Synthesis of human U1 RNA. II. Identification of two regions of the promoter essential for transcription initiation at position +1. J Biol Chem (1984) 2.46

Identification of a gene for the alpha-subunit of RNA polymerase at the str-spc region of the Escherichia coli chromosome. Proc Natl Acad Sci U S A (1975) 2.45

Purification of eukaryotic RNA polymerase II by immunoaffinity chromatography. Elution of active enzyme with protein stabilizing agents from a polyol-responsive monoclonal antibody. J Biol Chem (1990) 2.45

Replacement of potassium chloride by potassium glutamate dramatically enhances protein-DNA interactions in vitro. Biochemistry (1987) 2.45

Characterization of the Escherichia coli transcription factor sigma 70: localization of a region involved in the interaction with core RNA polymerase. Biochemistry (1989) 2.40

Nucleotide sequence preference at rat liver and wheat germ type 1 DNA topoisomerase breakage sites in duplex SV40 DNA. Nucleic Acids Res (1984) 2.37

Use of Mono Q high-resolution ion-exchange chromatography to obtain highly pure and active Escherichia coli RNA polymerase. Biochemistry (1990) 2.35

Stringent response in Escherichia coli induces expression of heat shock proteins. J Mol Biol (1985) 2.26

In vitro functional characterization of overproduced Escherichia coli katF/rpoS gene product. Biochemistry (1993) 2.16

A new method for the large-scale purification of wheat germ DNA-dependent RNA polymerase II. Biochemistry (1975) 2.14

Promoter recognition and discrimination by EsigmaS RNA polymerase. Mol Microbiol (2001) 2.06

Chlamydia trachomatis RNA polymerase major sigma subunit. Sequence and structural comparison of conserved and unique regions with Escherichia coli sigma 70 and Bacillus subtilis sigma 43. J Biol Chem (1990) 2.04

Purification and characterization of proximal sequence element-binding protein 1, a transcription activating protein related to Ku and TREF that binds the proximal sequence element of the human U1 promoter. J Biol Chem (1990) 2.03

Termination efficiency at rho-dependent terminators depends on kinetic coupling between RNA polymerase and rho. Proc Natl Acad Sci U S A (1992) 2.01

RNA polymerases from Bacillus subtilis and Escherichia coli differ in recognition of regulatory signals in vitro. J Bacteriol (2000) 1.98

Temperature dependence of the rate constants of the Escherichia coli RNA polymerase-lambda PR promoter interaction. Assignment of the kinetic steps corresponding to protein conformational change and DNA opening. J Mol Biol (1985) 1.93

Overexpression and purification of the sigma subunit of Escherichia coli RNA polymerase. Gene (1983) 1.92

Functional elements of the human U1 RNA promoter. Identification of five separate regions required for efficient transcription and template competition. J Biol Chem (1987) 1.91

Yeast RNA polymerase II at 5 A resolution. Cell (1999) 1.90

Structure and function of the sigma-70 subunit of Escherichia coli RNA polymerase. Monoclonal antibodies: localization of epitopes by peptide mapping and effects on transcription. Biochemistry (1988) 1.87

Kinetics and mechanism of the interaction of Escherichia coli RNA polymerase with the lambda PR promoter. J Mol Biol (1984) 1.84

Tagetitoxin: a new inhibitor of eukaryotic transcription by RNA polymerase III. J Biol Chem (1990) 1.77

Inhibition of RNA polymerase by streptolydigin. Nat New Biol (1971) 1.76

An RNA polymerase mutant with reduced accuracy of chain elongation. Biochemistry (1986) 1.75

Mutations in the Ion gene of E. coli K12 phenotypically suppress a mutation in the sigma subunit of RNA polymerase. Cell (1983) 1.74

Nonspecific interactions of Escherichia coli RNA polymerase with native and denatured DNA: differences in the binding behavior of core and holoenzyme. Biochemistry (1978) 1.67

Cloning and in vivo and in vitro regulation of cyclic AMP-dependent carbon starvation genes from Escherichia coli. J Bacteriol (1990) 1.61

Localization of a sigma70 binding site on the N terminus of the Escherichia coli RNA polymerase beta' subunit. J Biol Chem (1998) 1.60

Use of in vitro protein synthesis from polymerase chain reaction-generated templates to study interaction of Escherichia coli transcription factors with core RNA polymerase and for epitope mapping of monoclonal antibodies. J Biol Chem (1991) 1.58

Effects of the mutant sigma allele rpoD800 on the synthesis of specific macromolecular components of the Escherichia coli K12 cell. J Mol Biol (1984) 1.55

A coiled-coil from the RNA polymerase beta' subunit allosterically induces selective nontemplate strand binding by sigma(70). Cell (2001) 1.55

Manganese, Mn-dependent peroxidases, and the biodegradation of lignin. Biochem Biophys Res Commun (1988) 1.54

Purification and characterization of wheat germ DNA topoisomerase I (nicking-closing enzyme). J Biol Chem (1981) 1.49

A novel collection of accessory factors associated with yeast RNA polymerase II. Protein Expr Purif (1996) 1.49

Escherichia coli RNA polymerase binding and initiation of transcription on fragments of lambda rifd 18 DNA containing promoters for lambda genes and for rrnB, tufB, rplC,A, rplJ,L, and rpoB,C genes. Gene (1979) 1.46

The HIP1 initiator element plays a role in determining the in vitro requirement of the dihydrofolate reductase gene promoter for the C-terminal domain of RNA polymerase II. Mol Cell Biol (1992) 1.35

Rapid response to osmotic upshift by osmoregulated genes in Escherichia coli and Salmonella typhimurium. J Bacteriol (1988) 1.34

Overproduction and purification of sigma 32, the Escherichia coli heat shock transcription factor. Protein Expr Purif (1993) 1.33

Use of polyethyleneimine in purification of DNA-binding proteins. Methods Enzymol (1991) 1.33

Purification and lipid-layer crystallization of yeast RNA polymerase II. Proc Natl Acad Sci U S A (1990) 1.31

Construction of bacteriophage T7 late promoters with point mutations and characterization by in vitro transcription properties. Nucleic Acids Res (1987) 1.31

Nucleotide sequence of the rpsU-dnaG-rpoD operon from Salmonella typhimurium and a comparison of this sequence with the homologous operon of Escherichia coli. Gene (1985) 1.28

The human U1 snRNA promoter correctly initiates transcription in vitro and is activated by PSE1. Genes Dev (1990) 1.28

In an Escherichia coli coupled transcription-translation system, expression of the osmoregulated gene proU is stimulated at elevated potassium concentrations and by an extract from cells grown at high osmolality. J Biol Chem (1989) 1.28

PEPPLOT, a protein secondary structure analysis program for the UWGCG sequence analysis software package. Nucleic Acids Res (1986) 1.27

Tagetitoxin inhibition of RNA polymerase III transcription results from enhanced pausing at discrete sites and is template-dependent. J Biol Chem (1992) 1.25

Isolation and characterization of a polyol-responsive monoclonal antibody useful for gentle purification of Escherichia coli RNA polymerase. Biochemistry (1992) 1.25

Characterization of a rho-dependent termination site within the cro gene of bacteriophage lambda. J Biol Chem (1980) 1.24

Studies of the role of the Escherichia coli heat shock regulatory protein sigma 32 by the use of monoclonal antibodies. J Biol Chem (1987) 1.23

Rapid purification of His(6)-tagged Bacillus subtilis core RNA polymerase. Protein Expr Purif (2000) 1.22

Immune response in the mouse to endogenous leukemia viruses. Cold Spring Harb Symp Quant Biol (1975) 1.22

Variables affecting the selectivity and efficiency of retention of DNA fragments by E. coli RNA polymerase in the nitrocellulose-filter-binding assay. Gene (1981) 1.21

Characteristics and N-terminal amino acid sequence of a manganese peroxidase purified from Lentinula edodes cultures grown on a commercial wood substrate. Appl Microbiol Biotechnol (1990) 1.21

Interactions of T7 RNA polymerase with T7 late promoters measured by footprinting with methidiumpropyl-EDTA-iron(II). Biochemistry (1987) 1.15

rpoZ, encoding the omega subunit of Escherichia coli RNA polymerase, is in the same operon as spoT. J Bacteriol (1989) 1.14

Nitrocellulose filter binding studies of the interactions of Escherichia coli RNA polymerase holoenzyme with deoxyribonucleic acid restriction fragments: evidence for multiple classes of nonpromoter interactions, some of which display promoter-like properties. Biochemistry (1982) 1.14

Mutational analysis of beta '260-309, a sigma 70 binding site located on Escherichia coli core RNA polymerase. J Biol Chem (2000) 1.13

Direct evidence for the preferential binding of Escherichia coli RNA polymerase holoenzyme to the ends of deoxyribonucleic acid restriction fragments. Biochemistry (1983) 1.11

The cloning and sequence of the gene encoding the omega subunit of Escherichia coli RNA polymerase. Gene (1986) 1.09

Bacteriophage T7 late promoters with point mutations: quantitative footprinting and in vivo expression. Nucleic Acids Res (1988) 1.06

The leucine-responsive regulatory protein (Lrp) acts as a specific repressor for sigma s-dependent transcription of the Escherichia coli aidB gene. Mol Microbiol (1996) 1.05

Binding of the initiation factor sigma(70) to core RNA polymerase is a multistep process. Mol Cell (2001) 1.03

Measurement of binding constants for protein-DNA interactions by DNA-cellulose chromatography. Biochemistry (1977) 1.03

In vitro thermal inactivation of a temperature-sensitive sigma subunit mutant (rpoD800) of Escherichia coli RNA polymerase proceeds by aggregation. J Biol Chem (1981) 1.02

In vitro use of monoclonal antibodies in Escherichia coli S-30 extracts to determine the RNA polymerase sigma subunit required by a promoter. J Biol Chem (1989) 1.01

Ion effects on the aggregation and DNA-binding reactions of Escherichia coli RNA polymerase. Cold Spring Harb Symp Quant Biol (1983) 1.00

Isolation and characterization of transducing phage coding for sigma subunit of Escherichia coli RNA polymerase. Proc Natl Acad Sci U S A (1979) 1.00

Binding of Escherichia coli ribonucleic acid polymerase holoenzyme to a bacteriophage T7 promoter-containing fragment: selectivity exists over a wide range of solution conditions. Biochemistry (1980) 1.00

A simple, rapid, and quantitative radiometric assay of acetylcholinesterase. Anal Biochem (1974) 1.00

Studies of the subunit structure of wheat germ ribonucleic acid polymerase II. Biochemistry (1977) 1.00

Binding of Escherichia coli ribonucleic acid polymerase holoenzyme to a bacteriophage T7 promoter-containing fragment: evaluation of promoter binding constants as a function of solution conditions. Biochemistry (1980) 1.00

Escherichia coli RNA polymerase: purification, subunit structure, and factor requirements. Fed Proc (1970) 1.00

In vitro transcription by wheat germ ribonucleic acid polymerase II: effects of heparin and role of template integrity. Biochemistry (1979) 0.99

Identification of a heat shock promoter in the topA gene of Escherichia coli. J Bacteriol (1990) 0.98

Overproduction and purification of the omega subunit of Escherichia coli RNA polymerase. Protein Expr Purif (1990) 0.97

Binding of transcription factors to the promoter of the human U1 RNA gene studied by footprinting. J Biol Chem (1988) 0.97

Cysteine and methionine content of the Escherichia coli ribonucleic acid polymerase subunits. J Bacteriol (1976) 0.96

Immunoaffinity purification of RNA polymerase II and transcription factors using polyol-responsive monoclonal antibodies. Methods Enzymol (1996) 0.96

Aggregation equilibria of Escherichia coli RNA polymerase: evidence for anion-linked conformational transitions in the protomers of core and holoenzyme. Biochemistry (1982) 0.95

Epitope mapping using histidine-tagged protein fragments: application to Escherichia coli RNA polymerase sigma 70. Anal Biochem (1996) 0.93

Altered chemical properties in three mutants of E. coli RNA polymerase sigma subunit. Mol Gen Genet (1979) 0.91

Cross-linking of Escherichia coli RNA polymerase subunits: identification of beta' as the binding site of omega. Biochemistry (1993) 0.91

In Vitro Synthesis and Processing of Wheat alpha-Amylase : TRANSLATION OF GIBBERELLIC ACID-INDUCED WHEAT ALEURONE LAYER RNA BY WHEAT GERM AND XENOPUS LAEVIS OOCYTE SYSTEMS. Plant Physiol (1982) 0.90

Analysis of the in vitro synthesis of 5'-gamma-32P-labeled transcripts from coliphage lambda by gel electrophoresis, RNA-DNA hybridization, and RNase T1 digestion. J Biol Chem (1980) 0.90

Purification of Xenopus egg nucleoplasmin and its use in chromatin assembly in vitro. Methods Enzymol (1989) 0.90