The structure of copper-nitrite reductase from Achromobacter cycloclastes at five pH values, with NO2- bound and with type II copper depleted.

PubWeight™: 1.54‹?› | Rank: Top 4%

🔗 View Article (PMID 7499203)

Published in J Biol Chem on November 17, 1995

Authors

E T Adman1, J W Godden, S Turley

Author Affiliations

1: Department of Biological Structure, University of Washington, Seattle 98195-7420, USA.

Articles citing this

Cell biology and molecular basis of denitrification. Microbiol Mol Biol Rev (1997) 13.18

Copper active sites in biology. Chem Rev (2014) 1.90

Diversity of nitrite reductase (nirK and nirS) gene fragments in forested upland and wetland soils. Appl Environ Microbiol (2002) 1.68

Using Sculptor and Situs for simultaneous assembly of atomic components into low-resolution shapes. J Struct Biol (2010) 1.62

Dissimilatory nitrite reductase genes from autotrophic ammonia-oxidizing bacteria. Appl Environ Microbiol (2001) 1.58

Atomic resolution structures of resting-state, substrate- and product-complexed Cu-nitrite reductase provide insight into catalytic mechanism. Proc Natl Acad Sci U S A (2005) 1.28

Multiple subunit fitting into a low-resolution density map of a macromolecular complex using a gaussian mixture model. Biophys J (2008) 1.17

Structural comparison of cupredoxin domains: domain recycling to construct proteins with novel functions. Protein Sci (1997) 1.15

Evolutionary tabu search strategies for the simultaneous registration of multiple atomic structures in cryo-EM reconstructions. J Struct Biol (2010) 1.02

Rack-induced metal binding vs. flexibility: Met121His azurin crystal structures at different pH. Proc Natl Acad Sci U S A (1998) 1.01

Thermodynamic equilibrium between blue and green copper sites and the role of the protein in controlling function. Proc Natl Acad Sci U S A (2009) 1.01

Crystal structure of a two-domain multicopper oxidase: implications for the evolution of multicopper blue proteins. J Biol Chem (2009) 1.00

pH-dependence for binding a single nitrite ion to each type-2 copper centre in the copper-containing nitrite reductase of Alcaligenes xylosoxidans. Biochem J (1997) 0.91

Structure and function of a hexameric copper-containing nitrite reductase. Proc Natl Acad Sci U S A (2007) 0.90

Thermus oshimai JL-2 and T. thermophilus JL-18 genome analysis illuminates pathways for carbon, nitrogen, and sulfur cycling. Stand Genomic Sci (2013) 0.89

Directed evolution of copper nitrite reductase to a chromogenic reductant. Protein Eng Des Sel (2010) 0.86

The enzyme mechanism of nitrite reductase studied at single-molecule level. Proc Natl Acad Sci U S A (2008) 0.86

Directing the mode of nitrite binding to a copper-containing nitrite reductase from Alcaligenes faecalis S-6: characterization of an active site isoleucine. Protein Sci (2003) 0.86

The blue copper-containing nitrite reductase from Alcaligenes xylosoxidans: cloning of the nirA gene and characterization of the recombinant enzyme. J Bacteriol (1999) 0.85

Spectroscopic and computational studies of nitrite reductase: proton induced electron transfer and backbonding contributions to reactivity. J Am Chem Soc (2009) 0.84

Nitrite biosensing via selective enzymes--a long but promising route. Sensors (Basel) (2010) 0.82

Anisotropic covalency contributions to superexchange pathways in type one copper active sites. J Am Chem Soc (2014) 0.81

Catalytic and spectroscopic analysis of blue copper-containing nitrite reductase mutants altered in the environment of the type 2 copper centre: implications for substrate interaction. Biochem J (2001) 0.81

Refined distances between paramagnetic centers of a multi-copper nitrite reductase determined by pulsed EPR (iDEER) spectroscopy. Angew Chem Int Ed Engl (2013) 0.81

Demonstration of proton-coupled electron transfer in the copper-containing nitrite reductases. J Biol Chem (2009) 0.81

Redox cycling and kinetic analysis of single molecules of solution-phase nitrite reductase. Proc Natl Acad Sci U S A (2011) 0.80

Spectroscopic characterization of a green copper site in a single-domain cupredoxin. PLoS One (2014) 0.79

Thermal stability effects of removing the type-2 copper ligand His306 at the interface of nitrite reductase subunits. Eur Biophys J (2007) 0.77

Electron transfer activity of a de novo designed copper center in a three-helix bundle fold. Biochim Biophys Acta (2015) 0.76

A nitrite biosensor based on co-immobilization of nitrite reductase and viologen-modified chitosan on a glassy carbon electrode. Sensors (Basel) (2010) 0.75

Crystallization and preliminary X-ray diffraction analysis of a complex between the electron-transfer partners hexameric Cu-containing nitrite reductase and pseudoazurin. Acta Crystallogr Sect F Struct Biol Cryst Commun (2009) 0.75

Nitrite Reductase Activity in Engineered Azurin Variants. Inorg Chem (2016) 0.75

Articles by these authors

The induction of tolerance by dendritic cells that have captured apoptotic cells. J Exp Med (2000) 5.74

Efficient presentation of phagocytosed cellular fragments on the major histocompatibility complex class II products of dendritic cells. J Exp Med (1998) 3.58

The formation of immunogenic major histocompatibility complex class II-peptide ligands in lysosomal compartments of dendritic cells is regulated by inflammatory stimuli. J Exp Med (2000) 2.80

Developmental control of endocytosis in dendritic cells by Cdc42. Cell (2000) 2.64

Resistance to diet-induced hypercholesterolemia and gallstone formation in ACAT2-deficient mice. Nat Med (2000) 1.94

Generation or large numbers of immature and mature dendritic cells from rat bone marrow cultures. Eur J Immunol (1998) 1.92

The 2.3 angstrom X-ray structure of nitrite reductase from Achromobacter cycloclastes. Science (1991) 1.62

Antigen capture, processing, and presentation by dendritic cells: recent cell biological studies. Hum Immunol (1999) 1.57

The 2.0 A crystal structure of cephalosporin acylase. Structure (2000) 1.37

The hyaluronan receptor RHAMM regulates extracellular-regulated kinase. J Biol Chem (1998) 1.36

Structure of nitrite bound to copper-containing nitrite reductase from Alcaligenes faecalis. Mechanistic implications. J Biol Chem (1997) 1.32

Crystal structure of Mycobacterium tuberculosis 7,8-dihydropteroate synthase in complex with pterin monophosphate: new insight into the enzymatic mechanism and sulfa-drug action. J Mol Biol (2000) 1.32

Structures of deoxy and oxy hemerythrin at 2.0 A resolution. J Mol Biol (1991) 1.29

Three-dimensional structure of M. tuberculosis dihydrofolate reductase reveals opportunities for the design of novel tuberculosis drugs. J Mol Biol (2000) 1.27

Crystal structure of 2-oxoisovalerate and dehydrogenase and the architecture of 2-oxo acid dehydrogenase multienzyme complexes. Nat Struct Biol (1999) 1.18

Crystal structure of human branched-chain alpha-ketoacid dehydrogenase and the molecular basis of multienzyme complex deficiency in maple syrup urine disease. Structure (2000) 1.11

Crystal structure of recombinant triosephosphate isomerase from Bacillus stearothermophilus. An analysis of potential thermostability factors in six isomerases with known three-dimensional structures points to the importance of hydrophobic interactions. Protein Sci (1995) 1.07

X-ray structure and site-directed mutagenesis of a nitrite reductase from Alcaligenes faecalis S-6: roles of two copper atoms in nitrite reduction. Biochemistry (1994) 1.06

Structure of Alcaligenes faecalis nitrite reductase and a copper site mutant, M150E, that contains zinc. Biochemistry (1995) 1.06

Structure of ferredoxin I from Azotobacter vinelandii. Proc Natl Acad Sci U S A (1988) 1.01

Transgenic expression of lymphotoxin restores lymph nodes to lymphotoxin-alpha-deficient mice. J Immunol (1997) 0.99

An unexpected extended conformation for the third TPR motif of the peroxin PEX5 from Trypanosoma brucei. J Mol Biol (2001) 0.96

A potential target enzyme for trypanocidal drugs revealed by the crystal structure of NAD-dependent glycerol-3-phosphate dehydrogenase from Leishmania mexicana. Structure (2000) 0.96

Identification of interaction site of pseudoazurin with its redox partner, copper-containing nitrite reductase from Alcaligenes faecalis S-6. Protein Eng (1995) 0.93

Phosphatidylinositol 3-kinase is required for adherens junction-dependent mammary epithelial cell spheroid formation. Differentiation (2000) 0.89

A 2.0-A structure of the blue copper protein (cupredoxin) from Alcaligenes faecalis S-6. J Biol Chem (1989) 0.88

Alternative metal-binding sites in rubrerythrin. Nat Struct Biol (1999) 0.84

The 1.9 A crystal structure of the "as isolated" rubrerythrin from Desulfovibrio vulgaris: some surprising results. J Biol Inorg Chem (2000) 0.84

Site-directed mutagenesis of pseudoazurin from Alcaligenes faecalis S-6; Pro80Ala mutant exhibits marked increase in reduction potential. Protein Eng (1992) 0.83

Distinguishing between natural products and synthetic molecules by descriptor Shannon entropy analysis and binary QSAR calculations. J Chem Inf Comput Sci (2000) 0.81

Database searching for compounds with similar biological activity using short binary bit string representations of molecules. J Chem Inf Comput Sci (1999) 0.80

Molecular scaffold-based design and comparison of combinatorial libraries focused on the ATP-binding site of protein kinases. J Mol Graph Model (1999) 0.79

Evaluation of descriptors and mini-fingerprints for the identification of molecules with similar activity. J Chem Inf Comput Sci (2000) 0.79

Mini-fingerprints detect similar activity of receptor ligands previously recognized only by three-dimensional pharmacophore-based methods. J Chem Inf Comput Sci (2001) 0.78

A taste of copper. Nat Struct Biol (1995) 0.77

Structure of WF-3681, 3-(2,5-dihydro-4-hydroxy-5-oxo-3-phenyl-2-furyl)propionic acid. Acta Crystallogr C (1988) 0.75

Crystallographic characterization of human eosinophil Charcot-Leyden crystals. J Mol Biol (1988) 0.75

Crystallization and preliminary X-ray diffraction study of a protein with a high potential rubredoxin center and a hemerythrin-type Fe center. Proteins (1988) 0.75

Structure at pH 6.5 of ferredoxin I from Azotobacter vinelandii at 2.3 A resolution. Acta Crystallogr D Biol Crystallogr (1993) 0.75

Fingerprint scaling increases the probability of identifying molecules with similar activity in virtual screening calculations. J Chem Inf Comput Sci (2001) 0.75

Mini-fingerprints for virtual screening: design principles and generation of novel prototypes based on information theory. SAR QSAR Environ Res (2003) 0.75