Published in Genes Dev on July 01, 1994
Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase. Microbiol Mol Biol Rev (2002) 5.60
DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcription. Proc Natl Acad Sci U S A (1998) 4.99
Strategies for achieving high-level expression of genes in Escherichia coli. Microbiol Rev (1996) 4.93
Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivity. J Bacteriol (2005) 4.86
The small RNA, DsrA, is essential for the low temperature expression of RpoS during exponential growth in Escherichia coli. EMBO J (1996) 4.10
The OxyS regulatory RNA represses rpoS translation and binds the Hfq (HF-I) protein. EMBO J (1998) 4.03
Escherichia coli physiology in Luria-Bertani broth. J Bacteriol (2007) 3.61
Regulation of Escherichia coli starvation sigma factor (sigma s) by ClpXP protease. J Bacteriol (1996) 3.59
Efficient translation of the RpoS sigma factor in Salmonella typhimurium requires host factor I, an RNA-binding protein encoded by the hfq gene. J Bacteriol (1996) 3.04
The response regulator RssB controls stability of the sigma(S) subunit of RNA polymerase in Escherichia coli. EMBO J (1996) 2.91
Quantitative control of the stationary phase-specific sigma factor, sigma S, in Escherichia coli: involvement of the nucleoid protein H-NS. EMBO J (1995) 2.78
The RssB response regulator directly targets sigma(S) for degradation by ClpXP. Genes Dev (2001) 2.74
Negative regulation of mutS and mutH repair gene expression by the Hfq and RpoS global regulators of Escherichia coli K-12. J Bacteriol (1997) 2.69
Regulation of proteolysis of the stationary-phase sigma factor RpoS. J Bacteriol (1998) 2.67
Role for the histone-like protein H-NS in growth phase-dependent and osmotic regulation of sigma S and many sigma S-dependent genes in Escherichia coli. J Bacteriol (1995) 2.55
Identification of transcriptional start sites and the role of ppGpp in the expression of rpoS, the structural gene for the sigma S subunit of RNA polymerase in Escherichia coli. J Bacteriol (1995) 2.54
Regulation of RNA polymerase sigma subunit synthesis in Escherichia coli: intracellular levels of sigma 70 and sigma 38. J Bacteriol (1995) 2.38
Inverse regulatory coordination of motility and curli-mediated adhesion in Escherichia coli. Genes Dev (2008) 2.37
Stringent response activates quorum sensing and modulates cell density-dependent gene expression in Pseudomonas aeruginosa. J Bacteriol (2001) 2.37
Mutations that increase expression of the rpoS gene and decrease its dependence on hfq function in Salmonella typhimurium. J Bacteriol (1997) 2.36
The RNA-binding protein HF-I plays a global regulatory role which is largely, but not exclusively, due to its role in expression of the sigmaS subunit of RNA polymerase in Escherichia coli. J Bacteriol (1997) 2.31
The Escherichia coli OxyS regulatory RNA represses fhlA translation by blocking ribosome binding. EMBO J (1998) 2.26
Variation in RNA polymerase sigma subunit composition within different stocks of Escherichia coli W3110. J Bacteriol (1997) 2.08
Whole-genome resequencing of Escherichia coli K-12 MG1655 undergoing short-term laboratory evolution in lactate minimal media reveals flexible selection of adaptive mutations. Genome Biol (2009) 2.06
Global analysis of Escherichia coli gene expression during the acetate-induced acid tolerance response. J Bacteriol (2001) 1.99
Impact of rpoS deletion on Escherichia coli biofilms. Appl Environ Microbiol (1999) 1.98
Selectivity of the Escherichia coli RNA polymerase E sigma 38 for overlapping promoters and ability to support CRP activation. Nucleic Acids Res (1995) 1.98
Correlation of mRNA expression and protein abundance affected by multiple sequence features related to translational efficiency in Desulfovibrio vulgaris: a quantitative analysis. Genetics (2006) 1.96
Collaborative regulation of Escherichia coli glutamate-dependent acid resistance by two AraC-like regulators, GadX and GadW (YhiW). J Bacteriol (2002) 1.94
Regulation of RpoS proteolysis in Escherichia coli: the response regulator RssB is a recognition factor that interacts with the turnover element in RpoS. Proc Natl Acad Sci U S A (1999) 1.88
Modulating RssB activity: IraP, a novel regulator of sigma(S) stability in Escherichia coli. Genes Dev (2006) 1.86
DksA affects ppGpp induction of RpoS at a translational level. J Bacteriol (2002) 1.84
Posttranscriptional osmotic regulation of the sigma(s) subunit of RNA polymerase in Escherichia coli. J Bacteriol (1996) 1.81
Ubiquitin-dependent degradation of the yeast Mat(alpha)2 repressor enables a switch in developmental state. Genes Dev (2003) 1.76
Induction of RpoS-dependent functions in glucose-limited continuous culture: what level of nutrient limitation induces the stationary phase of Escherichia coli? J Bacteriol (1996) 1.75
The downstream box: an efficient and independent translation initiation signal in Escherichia coli. EMBO J (1996) 1.70
The two-component regulators GacS and GacA influence accumulation of the stationary-phase sigma factor sigmaS and the stress response in Pseudomonas fluorescens Pf-5. J Bacteriol (1998) 1.65
Acid shock induction of RpoS is mediated by the mouse virulence gene mviA of Salmonella typhimurium. J Bacteriol (1996) 1.64
Transcription of the stationary-phase-associated hspX gene of Mycobacterium tuberculosis is inversely related to synthesis of the 16-kilodalton protein. J Bacteriol (1999) 1.57
Amplification of the housekeeping sigma factor in Pseudomonas fluorescens CHA0 enhances antibiotic production and improves biocontrol abilities. J Bacteriol (1995) 1.57
A two-component phosphotransfer network involving ArcB, ArcA, and RssB coordinates synthesis and proteolysis of sigmaS (RpoS) in E. coli. Genes Dev (2005) 1.55
Cloning, sequencing, and phenotypic characterization of the rpoS gene from Pseudomonas putida KT2440. J Bacteriol (1998) 1.55
UDP-glucose is a potential intracellular signal molecule in the control of expression of sigma S and sigma S-dependent genes in Escherichia coli. J Bacteriol (1995) 1.52
Central regulatory role for the RpoS sigma factor in expression of Salmonella dublin plasmid virulence genes. J Bacteriol (1995) 1.51
The complex bet promoters of Escherichia coli: regulation by oxygen (ArcA), choline (BetI), and osmotic stress. J Bacteriol (1996) 1.51
Identification of conserved, RpoS-dependent stationary-phase genes of Escherichia coli. J Bacteriol (1998) 1.49
The rpoS gene from Yersinia enterocolitica and its influence on expression of virulence factors. Infect Immun (1995) 1.47
RpoS- and OxyR-independent induction of HPI catalase at stationary phase in Escherichia coli and identification of rpoS mutations in common laboratory strains. J Bacteriol (1997) 1.46
Fis activates the RpoS-dependent stationary-phase expression of proP in Escherichia coli. J Bacteriol (1995) 1.46
The PhoP/PhoQ two-component system stabilizes the alternative sigma factor RpoS in Salmonella enterica. Proc Natl Acad Sci U S A (2006) 1.44
Roles of DnaK and RpoS in starvation-induced thermotolerance of Escherichia coli. J Bacteriol (1998) 1.42
In vivo transcription of the Escherichia coli oxyR regulon as a function of growth phase and in response to oxidative stress. J Bacteriol (1999) 1.38
Sigma E controls biogenesis of the antisense RNA MicA. Nucleic Acids Res (2007) 1.38
Heat shock regulation of sigmaS turnover: a role for DnaK and relationship between stress responses mediated by sigmaS and sigma32 in Escherichia coli. J Bacteriol (1997) 1.37
Shared control of gene expression in bacteria by transcription factors and global physiology of the cell. Mol Syst Biol (2013) 1.36
Trehalose-6-phosphate hydrolase of Escherichia coli. J Bacteriol (1994) 1.35
Role of RpoS in virulence of pathogens. Infect Immun (2009) 1.35
Regulation of rpoS gene expression in Pseudomonas: involvement of a TetR family regulator. J Bacteriol (2001) 1.33
Parallel pathways of repression and antirepression governing the transition to stationary phase in Bacillus subtilis. Proc Natl Acad Sci U S A (2008) 1.32
ppGpp regulation of RpoS degradation via anti-adaptor protein IraP. Proc Natl Acad Sci U S A (2007) 1.31
Expression of Salmonella typhimurium rpoS and rpoS-dependent genes in the intracellular environment of eukaryotic cells. Infect Immun (1996) 1.31
Role of ppGpp in rpoS stationary-phase regulation in Escherichia coli. J Bacteriol (2002) 1.30
Constitutive activation of the Escherichia coli Pho regulon upregulates rpoS translation in an Hfq-dependent fashion. J Bacteriol (2003) 1.30
Targeting of csgD by the small regulatory RNA RprA links stationary phase, biofilm formation and cell envelope stress in Escherichia coli. Mol Microbiol (2012) 1.27
Control of RpoS in global gene expression of Escherichia coli in minimal media. Mol Genet Genomics (2008) 1.26
Promoter substitution and deletion analysis of upstream region required for rpoS translational regulation. J Bacteriol (1998) 1.25
RpoS regulation of gene expression during exponential growth of Escherichia coli K12. Mol Genet Genomics (2007) 1.25
Two different Escherichia coli proP promoters respond to osmotic and growth phase signals. J Bacteriol (1995) 1.24
A conserved RpoS-dependent small RNA controls the synthesis of major porin OmpD. Nucleic Acids Res (2011) 1.23
Neuropathy target esterase. Biochem J (1999) 1.23
rpoS gene function is a disadvantage for Escherichia coli BJ4 during competitive colonization of the mouse large intestine. Infect Immun (2000) 1.22
Sequential recognition of two distinct sites in sigma(S) by the proteolytic targeting factor RssB and ClpX. EMBO J (2003) 1.20
pH-Dependent modulation of cyclic AMP levels and GadW-dependent repression of RpoS affect synthesis of the GadX regulator and Escherichia coli acid resistance. J Bacteriol (2003) 1.19
The LysR homolog LrhA promotes RpoS degradation by modulating activity of the response regulator sprE. J Bacteriol (1999) 1.17
A biochemical mechanism for nonrandom mutations and evolution. J Bacteriol (2000) 1.17
Effects of sigmaS and the transcriptional activator AppY on induction of the Escherichia coli hya and cbdAB-appA operons in response to carbon and phosphate starvation. J Bacteriol (1997) 1.15
Integrative analyses of posttranscriptional regulation in the yeast Saccharomyces cerevisiae using transcriptomic and proteomic data. Curr Microbiol (2008) 1.14
Effect of growth conditions on expression of the acid phosphatase (cyx-appA) operon and the appY gene, which encodes a transcriptional activator of Escherichia coli. J Bacteriol (1996) 1.14
Global adaptations resulting from high population densities in Escherichia coli cultures. J Bacteriol (2000) 1.14
Molecular function and potential evolution of the biofilm-modulating blue light-signalling pathway of Escherichia coli. Mol Microbiol (2012) 1.13
The fitness cost of streptomycin resistance depends on rpsL mutation, carbon source and RpoS (sigmaS). Genetics (2009) 1.13
Starvation for different nutrients in Escherichia coli results in differential modulation of RpoS levels and stability. J Bacteriol (2005) 1.13
Decline in ribosomal fidelity contributes to the accumulation and stabilization of the master stress response regulator sigmaS upon carbon starvation. Genes Dev (2007) 1.11
sigma factor selectivity of Escherichia coli RNA polymerase: role for CRP, IHF and lrp transcription factors. EMBO J (2000) 1.10
Sequences in the -35 region of Escherichia coli rpoS-dependent genes promote transcription by E sigma S. J Bacteriol (1996) 1.10
The YjbH protein of Bacillus subtilis enhances ClpXP-catalyzed proteolysis of Spx. J Bacteriol (2008) 1.09
The Escherichia coli gabDTPC operon: specific gamma-aminobutyrate catabolism and nonspecific induction. J Bacteriol (2002) 1.08
Small RNAs in the control of RpoS, CsgD, and biofilm architecture of Escherichia coli. RNA Biol (2014) 1.07
RpoS proteolysis is regulated by a mechanism that does not require the SprE (RssB) response regulator phosphorylation site. J Bacteriol (2004) 1.07
Polar localization and compartmentalization of ClpP proteases during growth and sporulation in Bacillus subtilis. J Bacteriol (2008) 1.07
Small noncoding RNA GcvB is a novel regulator of acid resistance in Escherichia coli. BMC Genomics (2009) 1.07
Role of the alternative sigma factor sigmaS in expression of the AlkS regulator of the Pseudomonas oleovorans alkane degradation pathway. J Bacteriol (1999) 1.05
Identification of sigma S-regulated genes in Salmonella typhimurium: complementary regulatory interactions between sigma S and cyclic AMP receptor protein. J Bacteriol (1996) 1.05
Cyclic AMP receptor protein functions as a repressor of the osmotically inducible promoter proP P1 in Escherichia coli. J Bacteriol (1997) 1.05
Escherichia coli ribosome-associated protein SRA, whose copy number increases during stationary phase. J Bacteriol (2001) 1.04
Entry of Escherichia coli into stationary phase is indicated by endogenous and exogenous accumulation of nucleobases. Appl Environ Microbiol (1995) 1.03
The general stress sigma factor sigmaS of Escherichia coli is induced during diauxic shift from glucose to lactose. J Bacteriol (1998) 1.02
Importance of RpoS and Dps in survival of exposure of both exponential- and stationary-phase Escherichia coli cells to the electrophile N-ethylmaleimide. J Bacteriol (1998) 1.02
The global regulators GacA and sigma(S) form part of a cascade that controls alginate production in Azotobacter vinelandii. J Bacteriol (2001) 1.02
Controlled degradation by ClpXP protease tunes the levels of the excision repair protein UvrA to the extent of DNA damage. Mol Microbiol (2008) 1.01
Identification of a central regulator of stationary-phase gene expression in Escherichia coli. Mol Microbiol (1991) 10.73
The role of the sigma factor sigma S (KatF) in bacterial global regulation. Annu Rev Microbiol (1994) 7.42
Growth phase-regulated expression of bolA and morphology of stationary-phase Escherichia coli cells are controlled by the novel sigma factor sigma S. J Bacteriol (1991) 5.02
The OxyS regulatory RNA represses rpoS translation and binds the Hfq (HF-I) protein. EMBO J (1998) 4.03
The RNA-binding protein HF-I, known as a host factor for phage Qbeta RNA replication, is essential for rpoS translation in Escherichia coli. Genes Dev (1996) 3.62
The response regulator RssB controls stability of the sigma(S) subunit of RNA polymerase in Escherichia coli. EMBO J (1996) 2.91
Role for the histone-like protein H-NS in growth phase-dependent and osmotic regulation of sigma S and many sigma S-dependent genes in Escherichia coli. J Bacteriol (1995) 2.55
Identification of transcriptional start sites and the role of ppGpp in the expression of rpoS, the structural gene for the sigma S subunit of RNA polymerase in Escherichia coli. J Bacteriol (1995) 2.54
The RNA-binding protein HF-I plays a global regulatory role which is largely, but not exclusively, due to its role in expression of the sigmaS subunit of RNA polymerase in Escherichia coli. J Bacteriol (1997) 2.31
Identification and characterization of stationary phase-inducible genes in Escherichia coli. Mol Microbiol (1993) 2.05
The nlpD gene is located in an operon with rpoS on the Escherichia coli chromosome and encodes a novel lipoprotein with a potential function in cell wall formation. Mol Microbiol (1994) 2.01
Regulation of RpoS proteolysis in Escherichia coli: the response regulator RssB is a recognition factor that interacts with the turnover element in RpoS. Proc Natl Acad Sci U S A (1999) 1.88
Posttranscriptional osmotic regulation of the sigma(s) subunit of RNA polymerase in Escherichia coli. J Bacteriol (1996) 1.81
Regulation of RssB-dependent proteolysis in Escherichia coli: a role for acetyl phosphate in a response regulator-controlled process. Mol Microbiol (1998) 1.74
What makes an Escherichia coli promoter sigma(S) dependent? Role of the -13/-14 nucleotide promoter positions and region 2.5 of sigma(S). Mol Microbiol (2001) 1.57
UDP-glucose is a potential intracellular signal molecule in the control of expression of sigma S and sigma S-dependent genes in Escherichia coli. J Bacteriol (1995) 1.52
The response regulator RssB, a recognition factor for sigmaS proteolysis in Escherichia coli, can act like an anti-sigmaS factor. Mol Microbiol (2000) 1.44
Heat shock regulation of sigmaS turnover: a role for DnaK and relationship between stress responses mediated by sigmaS and sigma32 in Escherichia coli. J Bacteriol (1997) 1.37
Molecular analysis of the regulation of csiD, a carbon starvation-inducible gene in Escherichia coli that is exclusively dependent on sigma s and requires activation by cAMP-CRP. J Mol Biol (1998) 1.35
Interplay between global regulators of Escherichia coli: effect of RpoS, Lrp and H-NS on transcription of the gene osmC. Mol Microbiol (1998) 1.34
Role of the response regulator RssB in sigma recognition and initiation of sigma proteolysis in Escherichia coli. Mol Microbiol (2001) 1.17
The Escherichia coli histone-like protein HU regulates rpoS translation. Mol Microbiol (2001) 1.14
sigma factor selectivity of Escherichia coli RNA polymerase: role for CRP, IHF and lrp transcription factors. EMBO J (2000) 1.10
Role of activator site position and a distal UP-element half-site for sigma factor selectivity at a CRP/H-NS-activated sigma(s)-dependent promoter in Escherichia coli. Mol Microbiol (2001) 1.10
The LysR-like regulator LeuO in Escherichia coli is involved in the translational regulation of rpoS by affecting the expression of the small regulatory DsrA-RNA. Mol Microbiol (1997) 1.09
The general stress sigma factor sigmaS of Escherichia coli is induced during diauxic shift from glucose to lactose. J Bacteriol (1998) 1.02
Regulatory characteristics and promoter analysis of csiE, a stationary phase-inducible gene under the control of sigma S and the cAMP-CRP complex in Escherichia coli. Mol Microbiol (1995) 1.01
Translational control of exported proteins in Escherichia coli. J Bacteriol (1986) 0.92
Trehalose is not relevant for in vivo activity of sigmaS-containing RNA polymerase in Escherichia coli. J Bacteriol (1998) 0.84
1H, 15N and 13C NMR assignments, secondary structure and overall topology of the Escherichia coli GlgS protein. Eur J Biochem (1997) 0.79
On-line monitoring of gene expression. Microbiology (1999) 0.79