Published in Int J Syst Bacteriol on July 01, 1995
DNA recovery from soils of diverse composition. Appl Environ Microbiol (1996) 15.02
Cell biology and molecular basis of denitrification. Microbiol Mol Biol Rev (1997) 13.18
Evaluation of PCR-generated chimeras, mutations, and heteroduplexes with 16S rRNA gene-based cloning. Appl Environ Microbiol (2001) 3.76
A computer-simulated restriction fragment length polymorphism analysis of bacterial small-subunit rRNA genes: efficacy of selected tetrameric restriction enzymes for studies of microbial diversity in nature. Appl Environ Microbiol (1996) 3.53
Development and evaluation of functional gene arrays for detection of selected genes in the environment. Appl Environ Microbiol (2001) 3.36
How stable is stable? Function versus community composition. Appl Environ Microbiol (1999) 3.08
Spatial and resource factors influencing high microbial diversity in soil. Appl Environ Microbiol (2002) 2.99
16S rRNA gene-based detection of tetrachloroethene-dechlorinating Desulfuromonas and Dehalococcoides species. Appl Environ Microbiol (2000) 2.75
Recent advances in petroleum microbiology. Microbiol Mol Biol Rev (2003) 2.53
Transcriptome dynamics of Deinococcus radiodurans recovering from ionizing radiation. Proc Natl Acad Sci U S A (2003) 2.52
Microarray-based analysis of subnanogram quantities of microbial community DNAs by using whole-community genome amplification. Appl Environ Microbiol (2006) 2.31
Burkholderia, a genus rich in plant-associated nitrogen fixers with wide environmental and geographic distribution. Appl Environ Microbiol (2001) 1.88
Relationships between microbial community structure and hydrochemistry in a landfill leachate-polluted aquifer. Appl Environ Microbiol (2001) 1.83
Benzylsuccinate Formation as a Means of Anaerobic Toluene Activation by Sulfate-Reducing Strain PRTOL1. Appl Environ Microbiol (1997) 1.63
Acidophilic methanotrophic communities from Sphagnum peat bogs. Appl Environ Microbiol (1998) 1.58
Influence of vitamin B12 and cocultures on the growth of Dehalococcoides isolates in defined medium. Appl Environ Microbiol (2007) 1.53
Succession and convergence of biofilm communities in fixed-film reactors treating aromatic hydrocarbons in groundwater. Appl Environ Microbiol (1997) 1.52
Isolation and characterization of metal-reducing thermoanaerobacter strains from deep subsurface environments of the Piceance Basin, Colorado. Appl Environ Microbiol (2002) 1.52
Initial reactions in anaerobic oxidation of m-xylene by the denitrifying bacterium Azoarcus sp. strain T. J Bacteriol (1999) 1.49
Alkaline anaerobic respiration: isolation and characterization of a novel alkaliphilic and metal-reducing bacterium. Appl Environ Microbiol (2004) 1.48
Next-generation sequencing of microbial communities in the Athabasca River and its tributaries in relation to oil sands mining activities. Appl Environ Microbiol (2012) 1.43
Molecular diversity of denitrifying genes in continental margin sediments within the oxygen-deficient zone off the Pacific coast of Mexico. Appl Environ Microbiol (2003) 1.43
Evidence for acetyl coenzyme A and cinnamoyl coenzyme A in the anaerobic toluene mineralization pathway in Azoarcus tolulyticus Tol-4. Appl Environ Microbiol (1996) 1.42
Molecular characterization of bacterial populations in petroleum-contaminated groundwater discharged from underground crude oil storage cavities. Appl Environ Microbiol (2000) 1.37
Identification and sequence analysis of two regulatory genes involved in anaerobic toluene metabolism by strain T1. Appl Environ Microbiol (1997) 1.37
Biophysical controls on community succession in stream biofilms. Appl Environ Microbiol (2007) 1.29
In situ expression of nifD in Geobacteraceae in subsurface sediments. Appl Environ Microbiol (2004) 1.29
Empirical evaluation of a new method for calculating signal-to-noise ratio for microarray data analysis. Appl Environ Microbiol (2008) 1.27
In situ analysis of denitrifying toluene- and m-xylene-degrading bacteria in a diesel fuel-contaminated laboratory aquifer column. Appl Environ Microbiol (1997) 1.26
Sensitive detection of a novel class of toluene-degrading denitrifiers, Azoarcus tolulyticus, with small-subunit rRNA primers and probes. Appl Environ Microbiol (1997) 1.24
Nitric oxide reductase (norB) genes from pure cultures and environmental samples. Appl Environ Microbiol (2003) 1.21
Divergence in nitrogenases of Azoarcus spp., Proteobacteria of the beta subclass. J Bacteriol (1997) 1.19
Coffea arabica L., a new host plant for Acetobacter diazotrophicus, and isolation of other nitrogen-fixing acetobacteria. Appl Environ Microbiol (1997) 1.19
RNA-based stable isotope probing and isolation of anaerobic benzene-degrading bacteria from gasoline-contaminated groundwater. Appl Environ Microbiol (2006) 1.18
Benzylfumaric, benzylmaleic, and Z- and E-phenylitaconic acids: synthesis, characterization, and correlation with a metabolite generated by Azoarcus tolulyticus Tol-4 during anaerobic toluene degradation. Appl Environ Microbiol (1996) 1.17
Identification of N2-fixing plant- and fungus-associated Azoarcus species by PCR-based genomic fingerprints. Appl Environ Microbiol (1997) 1.16
Isolation and characterization of phenol-degrading denitrifying bacteria. Appl Environ Microbiol (1998) 1.14
Microbial Succession during a Field Evaluation of Phenol and Toluene as the Primary Substrates for Trichloroethene Cometabolism. Appl Environ Microbiol (1997) 1.11
Isolation and characterization of diverse halobenzoate-degrading denitrifying bacteria from soils and sediments. Appl Environ Microbiol (2000) 1.11
Microbial diversity and heterogeneity in sandy subsurface soils. Appl Environ Microbiol (2004) 1.11
Global transcriptional, physiological, and metabolite analyses of the responses of Desulfovibrio vulgaris hildenborough to salt adaptation. Appl Environ Microbiol (2009) 1.10
Shedding light on anaerobic benzene ring degradation: a process unique to prokaryotes? J Bacteriol (1997) 1.09
Engineering a hyperthermophilic archaeon for temperature-dependent product formation. MBio (2012) 1.06
Diversity of five anaerobic toluene-degrading microbial communities investigated using stable isotope probing. Appl Environ Microbiol (2011) 1.04
Single gene insertion drives bioalcohol production by a thermophilic archaeon. Proc Natl Acad Sci U S A (2014) 1.03
Development of a common oligonucleotide reference standard for microarray data normalization and comparison across different microbial communities. Appl Environ Microbiol (2009) 1.02
Isolation and characterization of a new denitrifying spirillum capable of anaerobic degradation of phenol. Appl Environ Microbiol (2000) 0.98
Transitions in nirS-type denitrifier diversity, community composition, and biogeochemical activity along the Chesapeake Bay estuary. Front Microbiol (2013) 0.96
Coliform bacteria and nitrogen fixation in pulp and paper mill effluent treatment systems. Appl Environ Microbiol (2000) 0.88
Genetic diversity of benzoyl coenzyme A reductase genes detected in denitrifying isolates and estuarine sediment communities. Appl Environ Microbiol (2005) 0.88
Pseudomonas sp. strain 273, an aerobic alpha, omega-dichloroalkaneDegrading bacterium. Appl Environ Microbiol (1998) 0.88
Microarray-based evaluation of whole-community genome DNA amplification methods. Appl Environ Microbiol (2011) 0.87
Identification of bacterial isolates obtained from intestinal contents associated with 12,000-year-old mastodon remains. Appl Environ Microbiol (1998) 0.86
The Thermoanaerobacter glycobiome reveals mechanisms of pentose and hexose co-utilization in bacteria. PLoS Genet (2011) 0.86
Profiling gene expression to distinguish the likely active diazotrophs from a sea of genetic potential in marine sediments. Environ Microbiol (2014) 0.85
Production of the phytohormone indole-3-acetic acid by estuarine species of the genus Vibrio. Appl Environ Microbiol (2009) 0.81
Isolation and characterization of a new benzene, toluene, and ethylbenzene degrading bacterium, Acinetobacter sp. B113. Curr Microbiol (2008) 0.81
Anaerobic degradation of 4-methylbenzoate by a newly isolated denitrifying bacterium, strain pMbN1. Appl Environ Microbiol (2011) 0.79
An uncultivated nitrate-reducing member of the genus Herminiimonas degrades toluene. Appl Environ Microbiol (2014) 0.77
Isolation of Acetobacterium sp. strain AG, which reductively debrominates octa- and pentabrominated diphenyl ether technical mixtures. Appl Environ Microbiol (2012) 0.76
Use of in-vitro experimental results to model in-situ experiments: bio-denitrification under geological disposal conditions. Springerplus (2013) 0.75
The Ribosomal Database Project: improved alignments and new tools for rRNA analysis. Nucleic Acids Res (2008) 52.43
The RDP-II (Ribosomal Database Project). Nucleic Acids Res (2001) 27.07
The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis. Nucleic Acids Res (2005) 24.85
The Ribosomal Database Project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy. Nucleic Acids Res (2003) 18.64
The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data. Nucleic Acids Res (2006) 16.26
DNA recovery from soils of diverse composition. Appl Environ Microbiol (1996) 15.02
A new version of the RDP (Ribosomal Database Project). Nucleic Acids Res (1999) 13.25
The RDP (Ribosomal Database Project) continues. Nucleic Acids Res (2000) 10.03
Genomics. Genome project standards in a new era of sequencing. Science (2009) 7.72
Isolation and partial characterization of bacteria in an anaerobic consortium that mineralizes 3-chlorobenzoic Acid. Appl Environ Microbiol (1984) 7.67
Dehalogenation: a novel pathway for the anaerobic biodegradation of haloaromatic compounds. Science (1982) 6.79
Anaerobic biodegradation of phenolic compounds in digested sludge. Appl Environ Microbiol (1983) 6.68
Numerically dominant denitrifying bacteria from world soils. Appl Environ Microbiol (1977) 5.25
Biogeography and degree of endemicity of fluorescent Pseudomonas strains in soil. Appl Environ Microbiol (2000) 5.11
Carbon and electron flow in mud and sandflat intertidal sediments at delaware inlet, nelson, new zealand. Appl Environ Microbiol (1980) 4.84
Kinetic parameters of the conversion of methane precursors to methane in a hypereutrophic lake sediment. Appl Environ Microbiol (1978) 4.83
Denitrification: ecological niches, competition and survival. Antonie Van Leeuwenhoek (1982) 4.57
Phylogenetic diversity of a bacterial community determined from Siberian tundra soil DNA. Microbiology (1997) 4.09
General method for determining anaerobic biodegradation potential. Appl Environ Microbiol (1984) 3.91
Kinetic explanation for accumulation of nitrite, nitric oxide, and nitrous oxide during bacterial denitrification. Appl Environ Microbiol (1981) 3.88
Reductive dechlorination of polychlorinated biphenyls by anaerobic microorganisms from sediments. Science (1988) 3.87
Evaluation of PCR-generated chimeras, mutations, and heteroduplexes with 16S rRNA gene-based cloning. Appl Environ Microbiol (2001) 3.76
Reductive dehalogenations of halobenzoates by anaerobic lake sediment microorganisms. Appl Environ Microbiol (1983) 3.72
Kinetics of hydrogen consumption by rumen fluid, anaerobic digestor sludge, and sediment. Appl Environ Microbiol (1982) 3.69
Characterization of the dominant and rare members of a young Hawaiian soil bacterial community with small-subunit ribosomal DNA amplified from DNA fractionated on the basis of its guanine and cytosine composition. Appl Environ Microbiol (1998) 3.67
Microbial reductive dehalogenation. Microbiol Rev (1992) 3.63
Nitrous oxide from soil denitrification: factors controlling its biological production. Science (1980) 3.57
A computer-simulated restriction fragment length polymorphism analysis of bacterial small-subunit rRNA genes: efficacy of selected tetrameric restriction enzymes for studies of microbial diversity in nature. Appl Environ Microbiol (1996) 3.53
Development and evaluation of functional gene arrays for detection of selected genes in the environment. Appl Environ Microbiol (2001) 3.36
Isolation, characterization, and distribution of denitrifying toluene degraders from a variety of habitats. Appl Environ Microbiol (1994) 3.09
The structure of anaerobic bacterial communities in the hypolimnia of several Michigan lakes. Can J Microbiol (1975) 2.78
16S rRNA gene-based detection of tetrachloroethene-dechlorinating Desulfuromonas and Dehalococcoides species. Appl Environ Microbiol (2000) 2.75
Strain DCB-1 conserves energy for growth from reductive dechlorination coupled to formate oxidation. Arch Microbiol (1990) 2.74
Growth yield increase linked to reductive dechlorination in a defined 3-chlorobenzoate degrading methanogenic coculture. Arch Microbiol (1987) 2.73
Nitrite reductase genes (nirK and nirS) as functional markers to investigate diversity of denitrifying bacteria in pacific northwest marine sediment communities. Appl Environ Microbiol (2000) 2.72
Nonlinear estimation of Monod growth kinetic parameters from a single substrate depletion curve. Appl Environ Microbiol (1983) 2.68
Gene probe analysis of soil microbial populations selected by amendment with 2,4-dichlorophenoxyacetic acid. Appl Environ Microbiol (1992) 2.66
Kinetics of microbial dehalogenation of haloaromatic substrates in methanogenic environments. Appl Environ Microbiol (1983) 2.56
Inhibition by sulfide of nitric and nitrous oxide reduction by denitrifying Pseudomonas fluorescens. Appl Environ Microbiol (1980) 2.51
Community structure of denitrifiers, bacteria, and archaea along redox gradients in Pacific Northwest marine sediments by terminal restriction fragment length polymorphism analysis of amplified nitrite reductase (nirS) and 16S rRNA genes. Appl Environ Microbiol (2001) 2.50
A morphological study of anaerobic bacteria from the hypolimnia of two Michigan lakes. Can J Microbiol (1975) 2.47
Denitrification and dissimilatory nitrate reduction to ammonium in digested sludge. Can J Microbiol (1981) 2.41
Methylocella palustris gen. nov., sp. nov., a new methane-oxidizing acidophilic bacterium from peat bogs, representing a novel subtype of serine-pathway methanotrophs. Int J Syst Evol Microbiol (2000) 2.38
Simultaneous recovery of RNA and DNA from soils and sediments. Appl Environ Microbiol (2001) 2.38
High levels of endemicity of 3-chlorobenzoate-degrading soil bacteria. Appl Environ Microbiol (1998) 2.37
Genetic and phenotypic diversity of 2,4-dichlorophenoxyacetic acid (2,4-D)-degrading bacteria isolated from 2,4-D-treated field soils. Appl Environ Microbiol (1994) 2.35
Isolation and characterization of a nitrite reductase gene and its use as a probe for denitrifying bacteria. Appl Environ Microbiol (1992) 2.32
Immunological identification and distribution of dissimilatory heme cd1 and nonheme copper nitrite reductases in denitrifying bacteria. Appl Environ Microbiol (1989) 2.27
Flexible community structure correlates with stable community function in methanogenic bioreactor communities perturbed by glucose. Appl Environ Microbiol (2000) 2.24
Nitrous oxide production by organisms other than nitrifiers or denitrifiers. Appl Environ Microbiol (1982) 2.08
Characterization of Desulfitobacterium chlororespirans sp. nov., which grows by coupling the oxidation of lactate to the reductive dechlorination of 3-chloro-4-hydroxybenzoate. Appl Environ Microbiol (1996) 2.05
Fate of polybrominated biphenyls (PBB's) in soils. Persistence and plant uptake. J Agric Food Chem (1977) 2.04
Dissimilatory reduction of nitrate and nitrite in the bovine rumen: nitrous oxide production and effect of acetylene. Appl Environ Microbiol (1981) 2.04
2,4-Dichlorophenoxyacetic acid-degrading bacteria contain mosaics of catabolic genes. Appl Environ Microbiol (1995) 2.01
Isolation and characterization of a novel bacterium growing via reductive dehalogenation of 2-chlorophenol. Appl Environ Microbiol (1994) 1.99
Global transcriptome analysis of Shewanella oneidensis MR-1 exposed to different terminal electron acceptors. J Bacteriol (2005) 1.97
Characterization of the requirements and substrates for reductive dehalogenation by strain DCB-1. J Ind Microbiol (1990) 1.93
Gene transfer from a bacterium injected into an aquifer to an indigenous bacterium. Mol Ecol (1995) 1.93
Temporal change in nitrous oxide and dinitrogen from denitrification following onset of anaerobiosis. Appl Environ Microbiol (1979) 1.90
Physiological characterization of strain DCB-1, a unique dehalogenating sulfidogenic bacterium. Appl Environ Microbiol (1988) 1.90
DNA/DNA hybridization to microarrays reveals gene-specific differences between closely related microbial genomes. Proc Natl Acad Sci U S A (2001) 1.90
Channel structures in aerobic biofilms of fixed-film reactors treating contaminated groundwater. Appl Environ Microbiol (1995) 1.87
Application of the fluorescent-antibody technique to the study of a methanogenic bacterium in lake sediments. Appl Environ Microbiol (1978) 1.85
Isolation of acidophilic methane-oxidizing bacteria from northern peat wetlands. Science (1998) 1.84
Soil bacterial community shift correlated with change from forest to pasture vegetation in a tropical soil. Appl Environ Microbiol (1999) 1.82
Metabolism of nitrilotriacetate by cells of Pseudomonas species. Appl Microbiol (1973) 1.82
Bacterial species determination from DNA-DNA hybridization by using genome fragments and DNA microarrays. Appl Environ Microbiol (2001) 1.79
Initial Characterization of a Reductive Dehalogenase from Desulfitobacterium chlororespirans Co23. Appl Environ Microbiol (1996) 1.76
Reductive dechlorination of hexachlorobenzene to tri- and dichlorobenzenes in anaerobic sewage sludge. Appl Environ Microbiol (1988) 1.76
Characterization of the structural gene encoding a copper-containing nitrite reductase and homology of this gene to DNA of other denitrifiers. Appl Environ Microbiol (1993) 1.72
Anaerobic activation of the entire denitrification pathway in Pseudomonas aeruginosa requires Anr, an analog of Fnr. J Bacteriol (1995) 1.72
Anaerobic dechlorination of polychlorobiphenyls (Aroclor 1242) by pasteurized and ethanol-treated microorganisms from sediments. Appl Environ Microbiol (1992) 1.71
Development, validation, and application of PCR primers for detection of tetracycline efflux genes of gram-negative bacteria. Appl Environ Microbiol (2002) 1.69
Kinetics of phenol biodegradation by an immobilized methanogenic consortium. Appl Environ Microbiol (1986) 1.68
Nitric oxide as an intermediate in denitrification: evidence from nitrogen-13 isotope exchange. Biochem Biophys Res Commun (1979) 1.66
Fraction of electrons consumed in electron acceptor reduction and hydrogen thresholds as indicators of halorespiratory physiology. Appl Environ Microbiol (1999) 1.66
Use of molecular techniques to evaluate the survival of a microorganism injected into an aquifer. Appl Environ Microbiol (1994) 1.64
Pristine soils mineralize 3-chlorobenzoate and 2,4-dichlorophenoxyacetate via different microbial populations. Appl Environ Microbiol (1996) 1.60
Assimilatory nitrate uptake in Pseudomonas fluorescens studied using nitrogen-13. Arch Microbiol (1981) 1.60
Biodegradation of metal-nitrilotriacetate complexes by a Pseudomonas species: mechanism of reaction. Appl Microbiol (1975) 1.59
Acidophilic methanotrophic communities from Sphagnum peat bogs. Appl Environ Microbiol (1998) 1.58
Bioenergetic conditions of butyrate metabolism by a syntrophic, anaerobic bacterium in coculture with hydrogen-oxidizing methanogenic and sulfidogenic bacteria. Appl Environ Microbiol (1988) 1.57
Biphenyl and benzoate metabolism in a genomic context: outlining genome-wide metabolic networks in Burkholderia xenovorans LB400. Appl Environ Microbiol (2004) 1.56
Method for measuring dissolved hydrogen in anaerobic ecosystems: application to the rumen. Appl Environ Microbiol (1981) 1.56
Detection in soil of a deletion in an engineered DNA sequence by using DNA probes. Appl Environ Microbiol (1989) 1.55
Succession and convergence of biofilm communities in fixed-film reactors treating aromatic hydrocarbons in groundwater. Appl Environ Microbiol (1997) 1.52
The reduction of nitrate to ammonium by a Clostridium sp. isolated from soil. J Gen Microbiol (1980) 1.51
Pristine environments harbor a new group of oligotrophic 2,4-dichlorophenoxyacetic acid-degrading bacteria. Appl Environ Microbiol (1997) 1.51
Dechlorination of chloroethenes is inhibited by 2-bromoethanesulfonate in the absence of methanogens. Appl Environ Microbiol (1997) 1.49
2,4-D metabolism: enzymatic conversion of chloromaleylacetic acid to succinic acid. J Agric Food Chem (1972) 1.48
Establishment of polychlorinated biphenyl-degrading enrichment culture with predominantly meta dechlorination. Appl Environ Microbiol (1992) 1.45
Parallel processing of substrate correlates with greater functional stability in methanogenic bioreactor communities perturbed by glucose. Appl Environ Microbiol (2000) 1.44
Complete reductive dechlorination of 1,2-dichloropropane by anaerobic bacteria. Appl Environ Microbiol (1997) 1.42
Evidence for acetyl coenzyme A and cinnamoyl coenzyme A in the anaerobic toluene mineralization pathway in Azoarcus tolulyticus Tol-4. Appl Environ Microbiol (1996) 1.42
Use of gene probes to aid in recovery and identification of functionally dominant 2,4-dichlorophenoxyacetic acid-degrading populations in soil. Appl Environ Microbiol (1994) 1.42
A two-species test of the hypothesis that spatial isolation influences microbial diversity in soil. Microb Ecol (2002) 1.41
Pacific Northwest marine sediments contain ammonia-oxidizing bacteria in the beta subdivision of the Proteobacteria. Appl Environ Microbiol (2000) 1.41
Leifsonia poae gen. nov., sp. nov., isolated from nematode galls on Poa annua, and reclassification of 'Corynebacterium aquaticum' Leifson 1962 as Leifsonia aquatica (ex Leifson 1962) gen. nov., nom. rev., comb. nov. and Clavibacter xyli Davis et al. 1984 with two subspecies as Leifsonia xyli (Davis et al. 1984) gen. nov., comb. nov. Int J Syst Evol Microbiol (2000) 1.37