Toward the development of a gene index to the human genome: an assessment of the nature of high-throughput EST sequence data.

PubWeight™: 4.60‹?› | Rank: Top 1%

🔗 View Article (PMID 8889550)

Published in Genome Res on September 01, 1996

Authors

J S Aaronson1, B Eckman, R A Blevins, J A Borkowski, J Myerson, S Imran, K O Elliston

Author Affiliations

1: Merck Research Laboratories, Department of Bioinformatics, Rahway, New Jersey 07065, USA. aaronson@merck.com

Articles citing this

GenBank. Nucleic Acids Res (1997) 11.73

SAGEmap: a public gene expression resource. Genome Res (2000) 10.41

GenBank. Nucleic Acids Res (1998) 9.36

A comparison of expressed sequence tags (ESTs) to human genomic sequences. Nucleic Acids Res (1997) 4.22

Long-range heterogeneity at the 3' ends of human mRNAs. Genome Res (2002) 3.91

Alternative gene form discovery and candidate gene selection from gene indexing projects. Genome Res (1998) 3.26

Large-scale statistical analyses of rice ESTs reveal correlated patterns of gene expression. Genome Res (1999) 2.98

A comprehensive approach to clustering of expressed human gene sequence: the sequence tag alignment and consensus knowledge base. Genome Res (1999) 2.68

Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. Proc Natl Acad Sci U S A (2000) 2.21

Identification of novel human genes evolutionarily conserved in Caenorhabditis elegans by comparative proteomics. Genome Res (2000) 1.99

A novel algorithm for computational identification of contaminated EST libraries. Nucleic Acids Res (2003) 1.96

Oligo(dT) primer generates a high frequency of truncated cDNAs through internal poly(A) priming during reverse transcription. Proc Natl Acad Sci U S A (2002) 1.71

Assembly, annotation, and integration of UNIGENE clusters into the human genome draft. Genome Res (2001) 1.60

A quantitative evaluation of SAGE. Genome Res (2000) 1.57

In silico cloning of novel endothelial-specific genes. Genome Res (2000) 1.42

Gene2EST: a BLAST2 server for searching expressed sequence tag (EST) databases with eukaryotic gene-sized queries. Nucleic Acids Res (2001) 1.35

EbEST: an automated tool using expressed sequence tags to delineate gene structure. Genome Res (1998) 1.30

A multiway analysis for identifying high integrity bovine BACs. BMC Genomics (2009) 1.11

BodyMap: a collection of 3' ESTs for analysis of human gene expression information. Genome Res (2000) 1.08

Directional cDNA library construction assisted by the in vitro recombination reaction. Nucleic Acids Res (2001) 1.07

Origin of gene overlap: the case of TCP1 and ACAT2. Genetics (1999) 1.06

The utility of mass spectrometry-based proteomic data for validation of novel alternative splice forms reconstructed from RNA-Seq data: a preliminary assessment. BMC Bioinformatics (2010) 1.05

Exploring the transcriptome of the burrowing nematode Radopholus similis. Mol Genet Genomics (2008) 0.99

IMAGE cDNA clones, UniGene clustering, and ACeDB: an integrated resource for expressed sequence information. Genome Res (1997) 0.90

Overview of DNA microarrays: types, applications, and their future. Curr Protoc Mol Biol (2013) 0.85

A systematic molecular genetic approach to study mammalian germline development. Int J Dev Biol (1998) 0.84

XenDB: full length cDNA prediction and cross species mapping in Xenopus laevis. BMC Genomics (2005) 0.81

GBuilder--an application for the visualization and integration of EST cluster data. Genome Res (2001) 0.80

Under-representation of PolyA/PolyT tailed ESTs in human ESTdb: an obstacle to alternative polyadenylation inference. Bioinformation (2006) 0.75

Articles by these authors

NMR View: A computer program for the visualization and analysis of NMR data. J Biomol NMR (1994) 22.42

Discounting of delayed rewards: Models of individual choice. J Exp Anal Behav (1995) 5.53

Rate of temporal discounting decreases with amount of reward. Mem Cognit (1997) 3.47

Amount of reward has opposite effects on the discounting of delayed and probabilistic outcomes. J Exp Psychol Learn Mem Cogn (1999) 3.09

Temporal discounting in choice between delayed rewards: the role of age and income. Psychol Aging (1996) 2.62

Male pseudohermaphroditism caused by mutations of testicular 17 beta-hydroxysteroid dehydrogenase 3. Nat Genet (1994) 2.35

Choice in transition: A comparison of melioration and the kinetic model. J Exp Anal Behav (1988) 1.78

Cloning and pharmacological characterization of a human bradykinin (BK-2) receptor. Biochem Biophys Res Commun (1992) 1.69

Temporal discounting and preference reversals in choice between delayed outcomes. Psychon Bull Rev (1994) 1.60

Expression cloning of a human B1 bradykinin receptor. J Biol Chem (1994) 1.54

Converging evidence that visuospatial cognition is more age-sensitive than verbal cognition. Psychol Aging (2000) 1.41

Differential pharmacology of cloned human and mouse B2 bradykinin receptors. Mol Pharmacol (1994) 1.37

Structural organization of a multifunctional polyketide synthase involved in the biosynthesis of the macrolide immunosuppressant FK506. Eur J Biochem (1997) 1.36

The refinement and the structure of the dimer of alpha-chymotrypsin at 1.67-A resolution. J Biol Chem (1985) 1.27

Expression cloning and characterization of human 17 beta-hydroxysteroid dehydrogenase type 2, a microsomal enzyme possessing 20 alpha-hydroxysteroid dehydrogenase activity. J Biol Chem (1993) 1.27

cDNA cloning and expression of bovine aspartyl (asparaginyl) beta-hydroxylase. J Biol Chem (1992) 1.19

Expression of B1 and B2 bradykinin receptor mRNA and their functional roles in sympathetic ganglia and sensory dorsal root ganglia neurones from wild-type and B2 receptor knockout mice. Neuropharmacology (1997) 1.08

Regional localization of over 300 loci on human chromosome 22 using a somatic cell hybrid mapping panel. Genomics (1996) 1.05

Effects of the bradykinin B1 receptor antagonist des-Arg9[Leu8]bradykinin and genetic disruption of the B2 receptor on nociception in rats and mice. Pain (1997) 0.99

Individual and developmental differences in working memory across the life span. Psychon Bull Rev (1999) 0.98

The Merck Gene Index browser: an extensible data integration system for gene finding, gene characterization and EST data mining. Bioinformatics (1998) 0.97

How general is general slowing? Evidence from the lexical domain. Psychol Aging (1991) 0.96

Structure of a tetrahedral transition state complex of alpha-chymotrypsin dimer at 1.8-A resolution. J Biol Chem (1987) 0.94

A fully active catalytic domain of bovine aspartyl (asparaginyl) beta-hydroxylase expressed in Escherichia coli: characterization and evidence for the identification of an active-site region in vertebrate alpha-ketoglutarate-dependent dioxygenases. Proc Natl Acad Sci U S A (1994) 0.93

Evolutionary relationship of the ligand-gated ion channels and the avermectin-sensitive, glutamate-gated chloride channels. J Mol Evol (1997) 0.91

General slowing of nonverbal information processing: evidence for a power law. J Gerontol (1987) 0.90

The effects of eye and limb movements on working memory. Memory (2001) 0.90

Replication of a geminivirus derived shuttle vector in maize endosperm cells. Nucleic Acids Res (1991) 0.87

Age, variability, and speed: between-subjects diversity. Psychol Aging (1988) 0.86

Direct database searching with MALDI-PSD spectra of peptides. Rapid Commun Mass Spectrom (1995) 0.86

Evoked potentials to dynamic random-dot correlograms in monkey and man: a test for cyclopean perception. Vision Res (1981) 0.85

Short-term and long-term effects of reinforcers on choice. J Exp Anal Behav (1993) 0.85

The interleukin-1 beta converting enzyme family of cysteine proteases. J Cell Biochem (1997) 0.83

Behavioral evidence for brain-based ability factors in visuospatial information processing. Neuropsychologia (2000) 0.83

Converging evidence for domain-specific slowing from multiple nonlexical tasks and multiple analytic methods. J Gerontol B Psychol Sci Soc Sci (1995) 0.82

Cloning and pharmacological characterization of bradykinin receptors. Braz J Med Biol Res (1994) 0.82

Automaintenance without stimulus-change reinforcement: Temporal control of key pecks. J Exp Anal Behav (1979) 0.81

Nociception and inflammatory hyperalgesia in B2 bradykinin receptor knockout mice. Immunopharmacology (1996) 0.80

Magnification in striate cortex and retinal ganglion cell layer of owl monkey: a quantitative comparison. Science (1977) 0.80

The agonist selectivity of a mouse B1 bradykinin receptor differs from human and rabbit B1 receptors. Immunopharmacology (1996) 0.80

Age and individual differences in visuospatial processing speed: testing the magnification hypothesis. Psychon Bull Rev (2000) 0.80

General cognitive slowing in the nonlexical domain: an experimental validation. Psychol Aging (1991) 0.78

Phospholipase D activity and phosphatidylethanol formation in stimulated HeLa cells expressing the human m1 muscarinic acetylcholine receptor gene. Biochem Biophys Res Commun (1991) 0.78

Cerebellar contribution to linguistic processing efficiency revealed by focal damage. J Int Neuropsychol Soc (1998) 0.77

General slowing of lexical and nonlexical information processing in dementia of the Alzheimer type. Neuropsychol Dev Cogn B Aging Neuropsychol Cogn (1998) 0.77

Optimal humanization of 1B4, an anti-CD18 murine monoclonal antibody, is achieved by correct choice of human V-region framework sequences. J Immunol (1993) 0.76

Comparison of the independent solvent structures of dimeric alpha-chymotrypsin with themselves and with gamma-chymotrypsin. J Biol Chem (1985) 0.76

Presence of a simple tandem repeat in the ITS1 region of the Xylariales. Curr Microbiol (2001) 0.75

Histology classification is not a predictor of clinical outcomes in advanced non-small cell lung cancer (NSCLC) treated with vinorelbine or gemcitabine combinations. Lung Cancer (2010) 0.75

Ownership and human genome. Nature (1994) 0.75

PROFILER: a tool for automatic searching of internally maintained databases. Comput Appl Biosci (1995) 0.75

Applying a causal framework to system modeling. Ernst Schering Res Found Workshop (2007) 0.75

XY sex reversal syndrome in the mare: clinical and behavioral studies, H-Y phenotype. Hum Genet (1988) 0.75

Temporal control of eating on periodic water schedules. Physiol Behav (1979) 0.75

Conserved repetitive DNA sequences (Bkm) in normal equine males and sex-reversed females detected by in situ hybridization. Cytogenet Cell Genet (1988) 0.75

Mary Gove Nichols' Mary Lyndon: a forgotten reform novel. Am Lit (1986) 0.75

Occurence of Candida infections in the neonatal intensive care unit. Ir Med J (2004) 0.75