DnaA protein binding to individual DnaA boxes in the Escherichia coli replication origin, oriC.

PubWeight™: 1.33‹?› | Rank: Top 10%

🔗 View Article (PMC 1170261)

Published in EMBO J on November 03, 1997

Authors

C Weigel1, A Schmidt, B Rückert, R Lurz, W Messer

Author Affiliations

1: Max-Planck-Institut für molekulare Genetik, Berlin-Dahlem, Germany.

Articles citing this

Comparative genomics and functional analysis of niche-specific adaptation in Pseudomonas putida. FEMS Microbiol Rev (2011) 2.24

Genome sequence of the plant growth promoting endophytic bacterium Enterobacter sp. 638. PLoS Genet (2010) 2.14

Two discriminatory binding sites in the Escherichia coli replication origin are required for DNA strand opening by initiator DnaA-ATP. Proc Natl Acad Sci U S A (2004) 1.67

Structural basis of replication origin recognition by the DnaA protein. Nucleic Acids Res (2003) 1.54

SeqA blocking of DnaA-oriC interactions ensures staged assembly of the E. coli pre-RC. Mol Cell (2006) 1.46

The interaction of DiaA and DnaA regulates the replication cycle in E. coli by directly promoting ATP DnaA-specific initiation complexes. Genes Dev (2007) 1.37

Cell cycle regulator phosphorylation stimulates two distinct modes of binding at a chromosome replication origin. EMBO J (2000) 1.20

A Novel WRKY transcription factor is required for induction of PR-1a gene expression by salicylic acid and bacterial elicitors. Plant Physiol (2008) 1.15

Biochemical characterization of Cdc6/Orc1 binding to the replication origin of the euryarchaeon Methanothermobacter thermoautotrophicus. Nucleic Acids Res (2004) 1.08

Bacterial origin recognition complexes direct assembly of higher-order DnaA oligomeric structures. Proc Natl Acad Sci U S A (2009) 1.01

DnaA, the initiator of Escherichia coli chromosomal replication, is located at the cell membrane. J Bacteriol (2000) 0.98

Effects of purified SeqA protein on oriC-dependent DNA replication in vitro. EMBO J (1998) 0.98

Architecture of bacterial replication initiation complexes: orisomes from four unrelated bacteria. Biochem J (2005) 0.98

oriC-encoded instructions for the initiation of bacterial chromosome replication. Front Microbiol (2015) 0.96

Mutational analysis reveals Escherichia coli oriC interacts with both DnaA-ATP and DnaA-ADP during pre-RC assembly. Mol Microbiol (2007) 0.94

Helicobacter pylori oriC--the first bipartite origin of chromosome replication in Gram-negative bacteria. Nucleic Acids Res (2012) 0.92

Molecular flip-flops formed by overlapping Fis sites. Nucleic Acids Res (2003) 0.92

Cluster of DnaA boxes involved in regulation of Streptomyces chromosome replication: from in silico to in vivo studies. J Bacteriol (2006) 0.92

Mycobacterium tuberculosis DnaA initiator protein: purification and DNA-binding requirements. Biochem J (2004) 0.91

Building the bacterial orisome: high-affinity DnaA recognition plays a role in setting the conformation of oriC DNA. Mol Microbiol (2014) 0.89

The orisome: structure and function. Front Microbiol (2015) 0.86

The Arg Fingers of Key DnaA Protomers Are Oriented Inward within the Replication Origin oriC and Stimulate DnaA Subcomplexes in the Initiation Complex. J Biol Chem (2015) 0.83

Interaction of the initiator protein of an IncB plasmid with its origin of DNA replication. J Bacteriol (2003) 0.81

Role of RepA and DnaA proteins in the opening of the origin of DNA replication of an IncB plasmid. J Bacteriol (2004) 0.81

Regulation of DNA Replication Initiation by Chromosome Structure. J Bacteriol (2015) 0.78

DNA Replication Initiation Is Blocked by a Distant Chromosome-Membrane Attachment. Curr Biol (2015) 0.78

CRISPR-mediated control of the bacterial initiation of replication. Nucleic Acids Res (2016) 0.76

Initiation of DNA Replication. Ecosal Plus (2010) 0.76

What influences DNA replication rate in budding yeast? PLoS One (2010) 0.75

Cooperative DnaA binding to the negatively supercoiled datA locus stimulates DnaA-ATP hydrolysis. J Biol Chem (2016) 0.75

Initiation of Chromosomal Replication in Predatory Bacterium Bdellovibrio bacteriovorus. Front Microbiol (2016) 0.75

Functional analysis of CedA based on its structure: residues important in binding of DNA and RNA polymerase and in the cell division regulation. J Biochem (2015) 0.75

Near-atomic structural model for bacterial DNA replication initiation complex and its functional insights. Proc Natl Acad Sci U S A (2016) 0.75

Articles cited by this

The dnaA protein complex with the E. coli chromosomal replication origin (oriC) and other DNA sites. Cell (1984) 7.27

Duplex opening by dnaA protein at novel sequences in initiation of replication at the origin of the E. coli chromosome. Cell (1988) 6.42

Enzymatic replication of the origin of the Escherichia coli chromosome. Proc Natl Acad Sci U S A (1981) 5.20

In vitro assembly of a prepriming complex at the origin of the Escherichia coli chromosome. J Biol Chem (1987) 2.47

The initiator protein DnaA: evolution, properties and function. Biochim Biophys Acta (1994) 2.29

Opening of the replication origin of Escherichia coli by DnaA protein with protein HU or IHF. J Biol Chem (1992) 2.01

Helicase action of dnaB protein during replication from the Escherichia coli chromosomal origin in vitro. J Biol Chem (1987) 2.00

Interaction of the initiator protein DnaA of Escherichia coli with its DNA target. J Biol Chem (1995) 1.91

DnaA protein directs the binding of DnaB protein in initiation of DNA replication in Escherichia coli. J Biol Chem (1994) 1.90

The replication origin region of Escherichia coli: nucleotide sequence and functional units. Gene (1983) 1.87

Structure and function of DnaA and the DnaA-box in eubacteria: evolutionary relationships of bacterial replication origins. Mol Microbiol (1991) 1.75

The dnaA protein of Escherichia coli. Abundance, improved purification, and membrane binding. J Biol Chem (1988) 1.70

In vivo studies of DnaA binding to the origin of replication of Escherichia coli. EMBO J (1989) 1.60

Sites of dnaA protein-binding in the replication origin of the Escherichia coli K-12 chromosome. J Mol Biol (1985) 1.55

Localized DNA melting and structural pertubations in the origin of replication, oriC, of Escherichia coli in vitro and in vivo. EMBO J (1991) 1.54

Sequential early stages in the in vitro initiation of replication at the origin of the Escherichia coli chromosome. J Biol Chem (1988) 1.52

Cell cycle-specific changes in nucleoprotein complexes at a chromosomal replication origin. EMBO J (1995) 1.48

Requirement of the Escherichia coli dnaA gene product for plasmid F maintenance. J Bacteriol (1986) 1.43

Characterization of an autonomously replicating region from the Streptomyces lividans chromosome. J Bacteriol (1992) 1.39

The DNA binding domain of the initiator protein DnaA. EMBO J (1995) 1.39

Replicatively active complexes of DnaA protein and the Escherichia coli chromosomal origin observed in the electron microscope. J Mol Biol (1993) 1.38

A comprehensive set of DnaA-box mutations in the replication origin, oriC, of Escherichia coli. Mol Microbiol (1996) 1.32

Ordered and sequential binding of DnaA protein to oriC, the chromosomal origin of Escherichia coli. J Biol Chem (1996) 1.27

The structure of the initiation complex at the replication origin, oriC, of Escherichia coli. Nucleic Acids Res (1993) 1.20

The DnaA box R4 in the minimal oriC is dispensable for initiation of Escherichia coli chromosome replication. Nucleic Acids Res (1995) 1.16

Mechanism of DNA A protein-dependent pBR322 DNA replication. DNA A protein-mediated trans-strand loading of the DNA B protein at the origin of pBR322 DNA. J Biol Chem (1991) 1.13

Induced bending of plasmid pLS1 DNA by the plasmid-encoded protein RepA. J Biol Chem (1989) 1.13

Methylation strongly enhances DNA bending in the replication origin region of the Escherichia coli chromosome. Mol Gen Genet (1989) 1.01

The complex for replication initiation of Escherichia coli. Chromosoma (1992) 1.01

Open complex formation by DnaA initiation protein at the Escherichia coli chromosomal origin requires the 13-mers precisely spaced relative to the 9-mers. Mol Microbiol (1994) 0.93

Mutations in the DnaA binding sites of the replication origin of Escherichia coli. Mol Gen Genet (1992) 0.93

Start sites for bidirectional in vitro DNA replication inside the replication origin, oriC, of Escherichia coli. EMBO J (1987) 0.90

Articles by these authors

Specific-purpose plasmid cloning vectors. II. Broad host range, high copy number, RSF1010-derived vectors, and a host-vector system for gene cloning in Pseudomonas. Gene (1981) 12.78

Huntingtin-encoded polyglutamine expansions form amyloid-like protein aggregates in vitro and in vivo. Cell (1997) 7.59

Point mutation at the ATP binding site of EGF receptor abolishes protein-tyrosine kinase activity and alters cellular routing. Cell (1987) 5.80

Nucleotide sequence of the origin of replication of the Escherichia coli K-12 chromosome. Proc Natl Acad Sci U S A (1979) 5.31

Self-assembly of polyglutamine-containing huntingtin fragments into amyloid-like fibrils: implications for Huntington's disease pathology. Proc Natl Acad Sci U S A (1999) 4.58

Early death due to defective neonatal lung liquid clearance in alpha-ENaC-deficient mice. Nat Genet (1996) 4.15

Activity of the hybrid trp-lac (tac) promoter of Escherichia coli in Pseudomonas putida. Construction of broad-host-range, controlled-expression vectors. Gene (1983) 3.98

Initiation of deoxyribonucleic acid replication in Escherichia coli B-r: chronology of events and transcriptional control of initiation. J Bacteriol (1972) 3.75

Regulation of polar cap formation in the life cycle of Escherichia coli. J Supramol Struct (1972) 3.56

Signal transduction through homologs of the Ste20p and Ste7p protein kinases can trigger hyphal formation in the pathogenic fungus Candida albicans. Proc Natl Acad Sci U S A (1996) 3.50

Accumulation of mutant huntingtin fragments in aggresome-like inclusion bodies as a result of insufficient protein degradation. Mol Biol Cell (2001) 3.41

Constitutive and induced expression of APO-1, a new member of the nerve growth factor/tumor necrosis factor receptor superfamily, in normal and neoplastic cells. Lab Invest (1993) 3.13

Early diabetes and abnormal postnatal pancreatic islet development in mice lacking Glut-2. Nat Genet (1997) 2.97

Dissection of IncP conjugative plasmid transfer: definition of the transfer region Tra2 by mobilization of the Tra1 region in trans. J Bacteriol (1992) 2.91

Origin of replication, oriC, of the Escherichia coli K12 chromosome: genetic mapping and minichromosome replication. Cold Spring Harb Symp Quant Biol (1979) 2.85

Localization and functional analysis of transposon mutations in regulatory genes of the TOL catabolic pathway. J Bacteriol (1983) 2.84

Starvation induces vacuolar targeting and degradation of the tryptophan permease in yeast. J Cell Biol (1999) 2.80

An intrinsic bond-centered electronic glass with unidirectional domains in underdoped cuprates. Science (2007) 2.76

Promoters in the E. coli replication origin. Nature (1981) 2.59

Release of tumor necrosis factor-alpha from macrophages. Enhancement and suppression are dose-dependently regulated by prostaglandin E2 and cyclic nucleotides. J Immunol (1988) 2.58

The portal protein of bacteriophage SPP1: a DNA pump with 13-fold symmetry. EMBO J (1993) 2.55

A mutant epidermal growth factor receptor with defective protein tyrosine kinase is unable to stimulate proto-oncogene expression and DNA synthesis. Mol Cell Biol (1987) 2.36

Identification of a polyketide synthase gene (pksP) of Aspergillus fumigatus involved in conidial pigment biosynthesis and virulence. Med Microbiol Immunol (1998) 2.36

The nucleotide sequence of the mercuric resistance operons of plasmid R100 and transposon Tn501: further evidence for mer genes which enhance the activity of the mercuric ion detoxification system. Mol Gen Genet (1986) 2.34

Virulence and hyphal formation of Candida albicans require the Ste20p-like protein kinase CaCla4p. Curr Biol (1997) 2.33

Plasmid replication functions. II. Cloning analysis of the repA replication region of antibiotic resistance plasmid R6-5. Mol Gen Genet (1979) 2.32

Geldanamycin activates a heat shock response and inhibits huntingtin aggregation in a cell culture model of Huntington's disease. Hum Mol Genet (2001) 2.29

Influence of the angiotensin II antagonist valsartan on left ventricular hypertrophy in patients with essential hypertension. Circulation (1998) 2.28

How Cooper pairs vanish approaching the Mott insulator in Bi2Sr2CaCu2O8+delta. Nature (2008) 2.27

Hemopoietic responses in mice injected with purified recombinant murine GM-CSF. Exp Hematol (1987) 2.25

HMf, a DNA-binding protein isolated from the hyperthermophilic archaeon Methanothermus fervidus, is most closely related to histones. Proc Natl Acad Sci U S A (1990) 2.22

In vitro assembly of relaxosomes at the transfer origin of plasmid RP4. Proc Natl Acad Sci U S A (1990) 2.18

Activity of murein hydrolases in synchronized cultures of Escherichia coli. J Bacteriol (1977) 2.16

In vitro cleavage of double- and single-stranded DNA by plasmid RSF1010-encoded mobilization proteins. Nucleic Acids Res (1992) 2.09

Characterization of two soybean repetitive proline-rich proteins and a cognate cDNA from germinated axes. Plant Cell (1989) 2.06

Mutants of Escherichia coli B-r defective in deoxyribonucleic acid initiation: dnaI, a new gene for replication. J Bacteriol (1974) 2.05

Cell wall integrity modulates RHO1 activity via the exchange factor ROM2. EMBO J (1998) 2.04

A versatile plasmid vector system for the regulated expression of genes in Escherichia coli. Biotechniques (1994) 2.02

Mechanism of origin unwinding: sequential binding of DnaA to double- and single-stranded DNA. EMBO J (2001) 2.02

The FIS protein binds and bends the origin of chromosomal DNA replication, oriC, of Escherichia coli. Nucleic Acids Res (1991) 2.02

Reporter constructs with low background activity utilizing the cat gene. Gene (1992) 2.02

The small GTP-binding protein rab6 functions in intra-Golgi transport. J Cell Biol (1994) 2.02

Interleukin-1 costimulatory activity on the interleukin-2 promoter via AP-1. Science (1989) 2.01

Receptor-mediated protein kinase activation and the mechanism of transmembrane signaling in bacterial chemotaxis. EMBO J (1997) 1.99

Conjugative pili of IncP plasmids, and the Ti plasmid T pilus are composed of cyclic subunits. J Biol Chem (1999) 1.98

Sequence-related protein export NTPases encoded by the conjugative transfer region of RP4 and by the cag pathogenicity island of Helicobacter pylori share similar hexameric ring structures. Proc Natl Acad Sci U S A (2000) 1.98

Isolation of two interferon-induced translational inhibitors: a protein kinase and an oligo-isoadenylate synthetase. Proc Natl Acad Sci U S A (1978) 1.97

[Correlation of growth hormone and aetiology of psoriasis]. Arch Dermatol Res (1981) 1.97

Biological activities of EGF-receptor mutants with individually altered autophosphorylation sites. EMBO J (1988) 1.92

Effect of dam methylation on the activity of the E. coli replication origin, oriC. EMBO J (1985) 1.91

Interaction of the initiator protein DnaA of Escherichia coli with its DNA target. J Biol Chem (1995) 1.91

Mini-chromosomes: plasmids which carry the E. coli replication origin. Mol Gen Genet (1978) 1.90

Origin of replication, oriC, of the Escherichia coli K12 chromosome: nucleotide sequence. Cold Spring Harb Symp Quant Biol (1979) 1.89

Inhibition of huntingtin fibrillogenesis by specific antibodies and small molecules: implications for Huntington's disease therapy. Proc Natl Acad Sci U S A (2000) 1.88

The replication origin region of Escherichia coli: nucleotide sequence and functional units. Gene (1983) 1.87

Regulation of a collagen gene promoter by the product of viral mos oncogene. Nature (1985) 1.85

Lipids, lipid modification and lipid-protein interaction in membrane budding and fission--insights from the roles of endophilin A1 and synaptophysin in synaptic vesicle endocytosis. Curr Opin Neurobiol (2000) 1.85

New cloning vectors for integration in the lambda attachment site attB of the Escherichia coli chromosome. Plasmid (1992) 1.83

Isolation and characterization of a pigmentless-conidium mutant of Aspergillus fumigatus with altered conidial surface and reduced virulence. Infect Immun (1997) 1.82

A sequence conserved in both the chicken and mouse alpha 2(I) collagen promoter contains sites sensitive to S1 nuclease. J Biol Chem (1984) 1.81

Interferon action: isolation of nuclease F, a translation inhibitor activated by interferon-induced (2'-5') oligo-isoadenylate. FEBS Lett (1978) 1.80

Enzymology of type IV macromolecule secretion systems: the conjugative transfer regions of plasmids RP4 and R388 and the cag pathogenicity island of Helicobacter pylori encode structurally and functionally related nucleoside triphosphate hydrolases. J Bacteriol (2000) 1.79

The Rho1 effector Pkc1, but not Bni1, mediates signalling from Tor2 to the actin cytoskeleton. Curr Biol (1998) 1.78

Non-invasive half millimetre 32 detector row computed tomography angiography accurately excludes significant stenoses in patients with advanced coronary artery disease and high calcium scores. Heart (2005) 1.78

Bacterial conjugation mediated by plasmid RP4: RSF1010 mobilization, donor-specific phage propagation, and pilus production require the same Tra2 core components of a proposed DNA transport complex. J Bacteriol (1995) 1.77

Identification and characterization of a novel extracellular matrix protein nephronectin that is associated with integrin alpha8beta1 in the embryonic kidney. J Cell Biol (2001) 1.77

Decreased blood pressure response in mice deficient of the alpha1b-adrenergic receptor. Proc Natl Acad Sci U S A (1997) 1.76

HEAT repeats mediate plasma membrane localization of Tor2p in yeast. J Biol Chem (2000) 1.75

Patients with acute coronary syndromes express enhanced CD40 ligand/CD154 on platelets. Heart (2001) 1.74

A microdeletion of less than 250 kb, including the proximal part of the FMR-I gene and the fragile-X site, in a male with the clinical phenotype of fragile-X syndrome. Am J Hum Genet (1992) 1.73

Replication of a specific terminal chromosome segment in Escherichia coli which is required for cell division. J Mol Biol (1973) 1.73

ATP- and ADP-dnaA protein, a molecular switch in gene regulation. EMBO J (1999) 1.69

Mercuric reductase structural genes from plasmid R100 and transposon Tn501: functional domains of the enzyme. Gene (1985) 1.68

A cyclic AMP response element mediates repression of tyrosine aminotransferase gene transcription by the tissue-specific extinguisher locus Tse-1. Cell (1990) 1.67

Two unrelated cell-derived sequences in the genome of avian leukemia and carcinoma inducing retrovirus MH2. EMBO J (1983) 1.67

Transverse-momentum and pseudorapidity distributions of charged hadrons in pp collisions at square root of s = 7 TeV. Phys Rev Lett (2010) 1.67

Several mutations in the melanocortin-4 receptor gene including a nonsense and a frameshift mutation associated with dominantly inherited obesity in humans. J Clin Endocrinol Metab (1999) 1.67

High resolution colony staining for the detection of bacterial growth requirement mutants using naphthol azo-dye techniques. Biochem Biophys Res Commun (1965) 1.66

The safety and efficacy of an extravascular, water-soluble sealant for vascular closure: initial clinical results for Mynx. Catheter Cardiovasc Interv (2007) 1.63

Molecular cloning and mapping of SphI restriction fragments of plasmid RP4. Plasmid (1983) 1.62

p53 and K-RAS alterations in pancreatic epithelial cell lesions. Oncogene (1993) 1.62

Replication of the broad host range plasmid RSF1010: requirement for three plasmid-encoded proteins. Proc Natl Acad Sci U S A (1984) 1.61

Control of the initiation of DNA replication in Escherichia coli. I. Negative control of initiation. Mol Gen Genet (1979) 1.61

Transcriptional control of the mouse alpha 2(I) collagen gene: functional deletion analysis of the promoter and evidence for cell-specific expression. Mol Cell Biol (1986) 1.60

Study of the mass and spin-parity of the Higgs boson candidate via its decays to Z boson pairs. Phys Rev Lett (2013) 1.56

High fatty acid content in rabbit serum is responsible for the differentiation of osteoblasts into adipocyte-like cells. J Bone Miner Res (1998) 1.56

The mechanism of photosynthetic sulfate reduction by isolated chloroplasts. Biochim Biophys Acta (1969) 1.56

An architectural role of the Escherichia coli chromatin protein FIS in organising DNA. Nucleic Acids Res (2001) 1.56

Kinetics of the induction of three translation-regulatory enzymes by interferon. Proc Natl Acad Sci U S A (1979) 1.56

Homologous cell-derived oncogenes in avian carcinoma virus MH2 and murine sarcoma virus 3611. Nature (1984) 1.56

Localized DNA melting and structural pertubations in the origin of replication, oriC, of Escherichia coli in vitro and in vivo. EMBO J (1991) 1.54

Regulation of transcription of the chromosomal dnaA gene of Escherichia coli. Mol Gen Genet (1986) 1.53

Binding of AP-1 Golgi adaptors to membranes requires phosphorylated cytoplasmic domains of the mannose 6-phosphate/insulin-like growth factor II receptor. J Biol Chem (1993) 1.53

Arrangement of coding and intervening sequences of chicken lysozyme gene. Proc Natl Acad Sci U S A (1979) 1.53

1.7 A structure of the stabilized REIv mutant T39K. Application of local NCS restraints. Acta Crystallogr D Biol Crystallogr (1999) 1.53

Cell type-specific desmosomal plaque proteins of the plakoglobin family: plakophilin 1 (band 6 protein). Differentiation (1994) 1.51