Bending and circularization of site-specific and stereoisomeric carcinogen-DNA adducts.

PubWeight™: 0.94‹?›

🔗 View Article (PMID 9425101)

Published in Biochemistry on January 13, 1998

Authors

R Xu1, B Mao, S Amin, N E Geacintov

Author Affiliations

1: Chemistry Department, MC 5180, New York University, New York, New York 10003, USA.

Articles citing this

Multimerization-cyclization of DNA fragments as a method of conformational analysis. Biophys J (2000) 1.35

Effects of DNA adduct structure and sequence context on strand opening of repair intermediates and incision by UvrABC nuclease. Biochemistry (2003) 1.13

The sequence dependence of human nucleotide excision repair efficiencies of benzo[a]pyrene-derived DNA lesions: insights into the structural factors that favor dual incisions. J Mol Biol (2009) 1.10

Base sequence context effects on nucleotide excision repair. J Nucleic Acids (2010) 0.95

Distant neighbor base sequence context effects in human nucleotide excision repair of a benzo[a]pyrene-derived DNA lesion. J Mol Biol (2010) 0.95

Probing the sequence effects on NarI-induced -2 frameshift mutagenesis by dynamic 19F NMR, UV, and CD spectroscopy. Biochemistry (2007) 0.95

Dynamics of a benzo[a]pyrene-derived guanine DNA lesion in TGT and CGC sequence contexts: enhanced mobility in TGT explains conformational heterogeneity, flexible bending, and greater susceptibility to nucleotide excision repair. J Mol Biol (2007) 0.93

Differential nucleotide excision repair susceptibility of bulky DNA adducts in different sequence contexts: hierarchies of recognition signals. J Mol Biol (2008) 0.93

Chemistry and structural biology of DNA damage and biological consequences. Chem Biodivers (2011) 0.92

Noncovalent interactions of a benzo[a]pyrene diol epoxide with DNA base pairs: insight into the formation of adducts of (+)-BaP DE-2 with DNA. J Phys Chem A (2010) 0.75

Articles by these authors

The association of meniscal pathologic changes with cartilage loss in symptomatic knee osteoarthritis. Arthritis Rheum (2006) 3.51

Change in joint space width: hyaline articular cartilage loss or alteration in meniscus? Arthritis Rheum (2006) 2.80

Activation of chemically diverse procarcinogens by human cytochrome P-450 1B1. Cancer Res (1996) 2.34

Targeting of lung cancer mutational hotspots by polycyclic aromatic hydrocarbons. J Natl Cancer Inst (2000) 2.27

Error-free and error-prone lesion bypass by human DNA polymerase kappa in vitro. Nucleic Acids Res (2000) 2.25

NMR solution structures of stereoisometric covalent polycyclic aromatic carcinogen-DNA adduct: principles, patterns, and diversity. Chem Res Toxicol (1997) 2.11

Error-prone lesion bypass by human DNA polymerase eta. Nucleic Acids Res (2000) 2.07

Induction of lung and exocrine pancreas tumors in F344 rats by tobacco-specific and Areca-derived N-nitrosamines. Cancer Res (1988) 1.96

Patterns and predictors of hospitalisation in first-episode psychosis. Prospective cohort study. Br J Psychiatry (2001) 1.87

Exciton interactions and chromophore orientation in the purple membrane. J Mol Biol (1977) 1.83

Hinge-bending in L-arabinose-binding protein. The "Venus's-flytrap" model. J Biol Chem (1982) 1.80

Analysis of picosecond laser induced fluorescence phenomena in photosynthetic membranes utilizing a master equation approach. Biophys J (1979) 1.79

Comparison of sex steroid measurements in men by immunoassay versus mass spectroscopy and relationships with cortical and trabecular volumetric bone mineral density. Osteoporos Int (2008) 1.73

Assessing forearm fracture risk in postmenopausal women. Osteoporos Int (2009) 1.71

Expression of the hematopoietic growth factor receptor FLT3 (STK-1/Flk2) in human leukemias. Blood (1996) 1.70

Magnetic field induced orientation of photosynthetic systems. Biochim Biophys Acta (1972) 1.69

STK-1, the human homolog of Flk-2/Flt-3, is selectively expressed in CD34+ human bone marrow cells and is involved in the proliferation of early progenitor/stem cells. Proc Natl Acad Sci U S A (1994) 1.67

Solution conformation of the major adduct between the carcinogen (+)-anti-benzo[a]pyrene diol epoxide and DNA. Proc Natl Acad Sci U S A (1992) 1.65

Prevaccination serologic screening for measles in health care workers. J Infect Dis (1991) 1.64

Topical corticosteroids for mycosis fungoides. Experience in 79 patients. Arch Dermatol (1998) 1.57

Molecular dynamics of ferrocytochrome c: anharmonicity of atomic displacements. Biopolymers (1982) 1.56

Bimolecular quenching of excitons and fluorescence in the photosynthetic unit. Biophys J (1976) 1.46

Decomposition rates of isothiocyanate conjugates determine their activity as inhibitors of cytochrome p450 enzymes. Chem Res Toxicol (2001) 1.44

Picosecond fluorescence kinetics and fast energy transfer processes in photosynthetic membranes. Biochim Biophys Acta (1980) 1.42

Treatment of canine haemangiosarcoma with suberoylanilide hydroxamic acid, a histone deacetylase inhibitor. Vet Comp Oncol (2004) 1.41

Chemoprevention of carcinogen-induced mammary tumorigenesis by the hybrid polar cytodifferentiation agent, suberanilohydroxamic acid (SAHA). Anticancer Res (2000) 1.36

Base pair conformation-dependent excision of benzo[a]pyrene diol epoxide-guanine adducts by human nucleotide excision repair enzymes. Mol Cell Biol (1997) 1.31

Molecular cloning of cDNA encoding a second cellular retinoic acid-binding protein. Proc Natl Acad Sci U S A (1990) 1.31

Prognosis in cutaneous T-cell lymphoma by skin stage: long-term survival in 489 patients. J Am Acad Dermatol (1999) 1.30

Magnetic field effect on the chlorophyll fluorescence in Chlorella. Biochim Biophys Acta (1971) 1.30

Unrepaired fjord region polycyclic aromatic hydrocarbon-DNA adducts in ras codon 61 mutational hot spots. Cancer Res (2000) 1.29

Interaction of the UvrABC nuclease system with a DNA duplex containing a single stereoisomer of dG-(+)- or dG-(-)-anti-BPDE. Biochemistry (1995) 1.28

Glutamate uptake disguises neurotoxic potency of glutamate agonists in cerebral cortex in dissociated cell culture. J Neurosci (1992) 1.28

Population encoding of spatial frequency, orientation, and color in macaque V1. J Neurophysiol (1994) 1.27

Solution conformation of the (+)-cis-anti-[BP]dG adduct in a DNA duplex: intercalation of the covalently attached benzo[a]pyrenyl ring into the helix and displacement of the modified deoxyguanosine. Biochemistry (1993) 1.24

Inhibitory effect of caffeic acid esters on azoxymethane-induced biochemical changes and aberrant crypt foci formation in rat colon. Cancer Res (1993) 1.22

Nuclear magnetic resonance solution structures of covalent aromatic amine-DNA adducts and their mutagenic relevance. Chem Res Toxicol (1998) 1.22

Influence of benzo[a]pyrene diol epoxide chirality on solution conformations of DNA covalent adducts: the (-)-trans-anti-[BP]G.C adduct structure and comparison with the (+)-trans-anti-[BP]G.C enantiomer. Biochemistry (1992) 1.20

The carbonate radical is a site-selective oxidizing agent of guanine in double-stranded oligonucleotides. J Biol Chem (2001) 1.17

The processing of a Benzo(a)pyrene adduct into a frameshift or a base substitution mutation requires a different set of genes in Escherichia coli. Mol Microbiol (2000) 1.17

The spectrum of pathogenic mutations in SPINK5 in 19 families with Netherton syndrome: implications for mutation detection and first case of prenatal diagnosis. J Invest Dermatol (2001) 1.16

Rapid single-dose model for lung tumor induction in A/J mice by 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone and the effect of diet. Carcinogenesis (1989) 1.16

The BCSH guideline on addressograph labels: experience at a cardiothoracic unit and findings of a telephone survey. Transfus Med (2000) 1.13

Mismatch repair processing of carcinogen-DNA adducts triggers apoptosis. Mol Cell Biol (1999) 1.12

Phenylalanine transfer RNA: molecular dynamics simulation. Science (1984) 1.12

Preparation and isolation of adducts in high yield derived from the binding of two benzo[a]pyrene-7,8-dihydroxy-9,10-oxide stereoisomers to the oligonucleotide d(ATATGTATA). Carcinogenesis (1990) 1.11

Savings/credit group formation and change in contraception. Demography (2001) 1.11

Fidelity of translesional synthesis past benzo[a]pyrene diol epoxide-2'-deoxyguanosine DNA adducts: marked effects of host cell, sequence context, and chirality. Biochemistry (1996) 1.11

Hierarchy of DNA damage recognition in Escherichia coli nucleotide excision repair. Biochemistry (2001) 1.11

Mutagenic potential of stereoisomeric bay region (+)- and (-)-cis-anti-benzo[a]pyrene diol epoxide-N2-2'-deoxyguanosine adducts in Escherichia coli and simian kidney cells. Biochemistry (1998) 1.11

Spectroscopic characteristics and site I/site II classification of cis and trans benzo[a]pyrene diolepoxide enantiomer-guanosine adducts in oligonucleotides and polynucleotides. Carcinogenesis (1991) 1.10

Flash photolysis and low temperature photochemistry of bovine rhodopsin with a fixed 11-ene. Biophys J (1981) 1.10

Placement of covered stents for the treatment of direct carotid cavernous fistulas. AJNR Am J Neuroradiol (2009) 1.09

Long-term mortality following fractures at different skeletal sites: a population-based cohort study. Osteoporos Int (2012) 1.08

Quenching of fluorescence by triplet excited states in chloroplasts. Biochim Biophys Acta (1979) 1.08

A master equation theory of fluorescence induction, photochemical yield, and singlet-triplet exciton quenching in photosynthetic systems. Biophys J (1983) 1.07

Levels and correlates of maternal nutritional status in urban Bangladesh. Eur J Clin Nutr (1994) 1.06

Photovoltages in suspensions of magnetically oriented chloroplasts. Biochim Biophys Acta (1978) 1.06

A linear dichroism study of the orientation of aromatic protein residues in magnetically oriented bovine rod outer segments. Photochem Photobiol (1978) 1.05

Outcome of psychosis in people of African-Caribbean family origin. Population-based first-episode study. Br J Psychiatry (1999) 1.05

Dose-response study of the carcinogenicity of tobacco-specific N-nitrosamines in F344 rats. J Cancer Res Clin Oncol (1984) 1.05

Orientation of chlorophyll in vivo. Studies with magnetic field oriented chlorella. Biochem Biophys Res Commun (1973) 1.05

Retinoic acid inhibition of cell cycle progression in MCF-7 human breast cancer cells. Exp Cell Res (1997) 1.04

Translesional synthesis on a DNA template containing a single stereoisomer of dG-(+)- or dG-(-)-anti-BPDE (7,8-dihydroxy-anti-9,10-epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene). Biochemistry (1993) 1.04

Comparative metabolism of the tobacco-related carcinogens benzo[a]pyrene, 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone, 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanol, and N'- nitrosonornicotine in human hepatic microsomes. Drug Metab Dispos (1997) 1.04

Tnk1: a novel intracellular tyrosine kinase gene isolated from human umbilical cord blood CD34+/Lin-/CD38- stem/progenitor cells. Oncogene (1996) 1.03

Polarized light spectroscopy of photosynthetic membranes in magneto-oriented whole cells and chloroplasts. Fluorescence and dichroism. Biochim Biophys Acta (1974) 1.02

Theoretical study of hinge bending in L-arabinose-binding protein. Internal energy and free energy changes. J Biol Chem (1983) 1.02

Formation of DNA repair intermediates and incision by the ATP-dependent UvrB-UvrC endonuclease. J Biol Chem (1997) 1.02

High force reaching task induces widespread inflammation, increased spinal cord neurochemicals and neuropathic pain. Neuroscience (2008) 1.01

Learning and memory in rats gestationally and lactationally exposed to 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD). Neurotoxicol Teratol (1999) 1.00

Collective motion in DNA and its role in drug intercalation. Biopolymers (1988) 1.00

A neoadjuvant clinical trial in colorectal cancer patients of the human anti-idiotypic antibody 105AD7, which mimics CD55. Clin Cancer Res (2000) 1.00

Cellular binding of benzo (a) pyrene to DNA characterized by low temperature fluorescence. Biochem Biophys Res Commun (1976) 1.00

Nitrogen dioxide as an oxidizing agent of 8-oxo-7,8-dihydro-2'-deoxyguanosine but not of 2'-deoxyguanosine. Chem Res Toxicol (2001) 0.99

Solution conformation of the (-)-trans-anti-benzo[c]phenanthrene-dA ([BPh]dA) adduct opposite dT in a DNA duplex: intercalation of the covalently attached benzo[c]phenanthrenyl ring to the 3'-side of the adduct site and comparison with the (+)-trans-anti-[BPh]dA opposite dT stereoisomer. Biochemistry (1995) 0.99

Orientation and linear dichroism of chloroplasts and sub-chloroplast fragments oriented in an electric field. Biochim Biophys Acta (1977) 0.98

A computerised neonatal data base and automated discharge summaries. Indian Pediatr (1987) 0.98

Effect of caffeic acid esters on carcinogen-induced mutagenicity and human colon adenocarcinoma cell growth. Chem Biol Interact (1992) 0.98

Stereochemical, structural, and thermodynamic origins of stability differences between stereoisomeric benzo[a]pyrene diol epoxide deoxyadenosine adducts in a DNA mutational hot spot sequence. J Am Chem Soc (2001) 0.98

Systemic lupus erythematosus and sickle-cell anaemia. Br Med J (1976) 0.97

Regulation of aromatase expression in breast cancer tissue. Ann N Y Acad Sci (2009) 0.97

Solution conformation of the (-)-cis-anti-benzo[a]pyrenyl-dG adduct opposite dC in a DNA duplex: intercalation of the covalently attached BP ring into the helix with base displacement of the modified deoxyguanosine into the major groove. Biochemistry (1996) 0.96

Hydrophobic forces dominate the thermodynamic characteristics of UvrA-DNA damage interactions. J Mol Biol (1998) 0.96

Calcium imaging of epileptiform events with single-cell resolution. J Neurobiol (2001) 0.96

Stereochemical origin of opposite orientations in DNA adducts derived from enantiomeric anti-benzo[a]pyrene diol epoxides with different tumorigenic potentials. Biochemistry (1999) 0.96

Site-specific benzo[a]pyrene diol epoxide-DNA adducts inhibit transcription elongation by bacteriophage T7 RNA polymerase. Biochemistry (1994) 0.95

Chemoprevention of colon carcinogenesis by phenylethyl-3-methylcaffeate. Cancer Res (1995) 0.95

Role of hydrophobic effects in the reaction of a polynuclear aromatic diol epoxide with oligodeoxynucleotides in aqueous solutions. Chem Res Toxicol (1998) 0.94

Molecular dynamics of phenylalanine transfer RNA. J Biomol Struct Dyn (1983) 0.93

Lysine/fibrin binding sites of kringles modeled after the structure of kringle 1 of prothrombin. Proteins (1988) 0.93

A quantitative evaluation of peroxidase inhibitors for tyramide signal amplification mediated cytochemistry and histochemistry. Histochem Cell Biol (2006) 0.93

Sequence specific mutagenesis of the major (+)-anti-benzo[a]pyrene diol epoxide-DNA adduct at a mutational hot spot in vitro and in Escherichia coli cells. Chem Res Toxicol (1997) 0.93

Synthesis and mutagenicity of trans-dihydrodiol metabolites of benzo[b]naphtho[2,1-d]thiophene. Chem Res Toxicol (1991) 0.93