Published in Proteins on May 01, 1998
Helix-packing motifs in membrane proteins. Proc Natl Acad Sci U S A (2006) 2.13
Comparison of helix interactions in membrane and soluble alpha-bundle proteins. Biophys J (2002) 1.88
Protein-protein interactions in the membrane: sequence, structural, and biological motifs. Structure (2008) 1.75
An atomic model for the pleated beta-sheet structure of Abeta amyloid protofilaments. Biophys J (1999) 1.71
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Spatial structure and pH-dependent conformational diversity of dimeric transmembrane domain of the receptor tyrosine kinase EphA1. J Biol Chem (2008) 1.33
Prediction of transmembrane helix orientation in polytopic membrane proteins. BMC Struct Biol (2006) 1.19
Structural organization and interactions of transmembrane domains in tetraspanin proteins. BMC Struct Biol (2005) 1.19
Interaction and conformational dynamics of membrane-spanning protein helices. Protein Sci (2009) 1.19
Complete predicted three-dimensional structure of the facilitator transmembrane protein and hepatitis C virus receptor CD81: conserved and variable structural domains in the tetraspanin superfamily. Biophys J (2006) 1.18
Left-handed dimer of EphA2 transmembrane domain: Helix packing diversity among receptor tyrosine kinases. Biophys J (2010) 1.14
Molecular packing and packing defects in helical membrane proteins. Biophys J (2004) 1.12
Predicting helix-helix interactions from residue contacts in membrane proteins. Bioinformatics (2009) 1.11
De novo design of defined helical bundles in membrane environments. Proc Natl Acad Sci U S A (2004) 1.03
A sequence and structural study of transmembrane helices. J Comput Aided Mol Des (2001) 0.94
Direct simulation of transmembrane helix association: role of asparagines. Biophys J (2004) 0.93
Molecular determinants and thermodynamics of the amyloid precursor protein transmembrane domain implicated in Alzheimer's disease. J Mol Biol (2011) 0.93
The interface of a membrane-spanning leucine zipper mapped by asparagine-scanning mutagenesis. Protein Sci (2004) 0.92
TMPad: an integrated structural database for helix-packing folds in transmembrane proteins. Nucleic Acids Res (2011) 0.87
An amino acid packing code for α-helical structure and protein design. J Mol Biol (2012) 0.86
Structure elucidation of dimeric transmembrane domains of bitopic proteins. Cell Adh Migr (2010) 0.85
Robust driving forces for transmembrane helix packing. Biophys J (2012) 0.85
A putative transmembrane leucine zipper of agrobacterium VirB10 is essential for t-pilus biogenesis but not type IV secretion. J Bacteriol (2013) 0.85
Association of transmembrane helices: what determines assembling of a dimer? J Comput Aided Mol Des (2006) 0.83
RHYTHM--a server to predict the orientation of transmembrane helices in channels and membrane-coils. Nucleic Acids Res (2009) 0.81
Assignment of oriented sample NMR resonances from a three transmembrane helix protein. J Magn Reson (2014) 0.80
A structural model of EmrE, a multi-drug transporter from Escherichia coli. Biophys J (2004) 0.79
Impact of membrane lipid composition on the structure and stability of the transmembrane domain of amyloid precursor protein. Proc Natl Acad Sci U S A (2016) 0.78
Driving forces for transmembrane alpha-helix oligomerization. Biophys J (2010) 0.77
Application of the Wang-Landau algorithm to the dimerization of glycophorin A. J Chem Phys (2009) 0.77
Mapping the homodimer interface of an optimized, artificial, transmembrane protein activator of the human erythropoietin receptor. PLoS One (2014) 0.75
Flexible Proteins at the Origin of Life. Life (Basel) (2017) 0.75
T-Coffee: A novel method for fast and accurate multiple sequence alignment. J Mol Biol (2000) 57.88
PRALINE: a multiple sequence alignment toolbox that integrates homology-extended and secondary structure information. Nucleic Acids Res (2005) 3.15
The KH domain occurs in a diverse set of RNA-binding proteins that include the antiterminator NusA and is probably involved in binding to nucleic acid. FEBS Lett (1993) 2.13
The REPRO server: finding protein internal sequence repeats through the Web. Trends Biochem Sci (2000) 1.84
Homology-extended sequence alignment. Nucleic Acids Res (2005) 1.40
KH domains within the FMR1 sequence suggest that fragile X syndrome stems from a defect in RNA metabolism. Trends Biochem Sci (1993) 1.37
Anatomy and evolution of proteins displaying the viral capsid jellyroll topology. J Mol Biol (1992) 1.25
Integrating protein secondary structure prediction and multiple sequence alignment. Curr Protein Pept Sci (2004) 1.23
The PRALINE online server: optimising progressive multiple alignment on the web. Comput Biol Chem (2003) 1.09
A simple and fast approach to prediction of protein secondary structure from multiply aligned sequences with accuracy above 70%. Protein Sci (1995) 0.98
The influence of gapped positions in multiple sequence alignments on secondary structure prediction methods. Comput Biol Chem (2004) 0.89
RNA structure prediction from evolutionary patterns of nucleotide composition. Nucleic Acids Res (2009) 0.86
Measuring non-steady-state metabolic fluxes in starch-converting faecal microbiota in vitro. Benef Microbes (2010) 0.79
Measuring non-steady-state metabolic fluxes in starch-converting faecal microbiota in vitro. Benef Microbes (2010) 0.75
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