Published in Appl Environ Microbiol on April 01, 1999
Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Appl Environ Microbiol (2005) 31.06
Quantitative comparisons of 16S rRNA gene sequence libraries from environmental samples. Appl Environ Microbiol (2001) 16.51
Counting the uncountable: statistical approaches to estimating microbial diversity. Appl Environ Microbiol (2001) 14.07
Integration of microbial ecology and statistics: a test to compare gene libraries. Appl Environ Microbiol (2004) 12.50
Identifying the dominant soil bacterial taxa in libraries of 16S rRNA and 16S rRNA genes. Appl Environ Microbiol (2006) 6.67
Introducing TreeClimber, a test to compare microbial community structures. Appl Environ Microbiol (2006) 5.69
High-density microarray of small-subunit ribosomal DNA probes. Appl Environ Microbiol (2002) 4.95
Empirical and theoretical bacterial diversity in four Arizona soils. Appl Environ Microbiol (2002) 4.26
Assessment of soil microbial community structure by use of taxon-specific quantitative PCR assays. Appl Environ Microbiol (2005) 4.18
Assessment of microbial diversity in four southwestern United States soils by 16S rRNA gene terminal restriction fragment analysis. Appl Environ Microbiol (2000) 4.12
Phylogenetic specificity and reproducibility and new method for analysis of terminal restriction fragment profiles of 16S rRNA genes from bacterial communities. Appl Environ Microbiol (2001) 4.01
Toward a census of bacteria in soil. PLoS Comput Biol (2006) 3.61
Seasonal changes in an alpine soil bacterial community in the colorado rocky mountains. Appl Environ Microbiol (2004) 3.09
Spatial and resource factors influencing high microbial diversity in soil. Appl Environ Microbiol (2002) 2.99
Molecular and culture-based analyses of prokaryotic communities from an agricultural soil and the burrows and casts of the earthworm Lumbricus rubellus. Appl Environ Microbiol (2002) 2.96
Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils. Appl Environ Microbiol (2009) 2.75
Diversity and seasonal fluctuations of the dominant members of the bacterial soil community in a wheat field as determined by cultivation and molecular methods. Appl Environ Microbiol (2001) 2.73
Search and discovery strategies for biotechnology: the paradigm shift. Microbiol Mol Biol Rev (2000) 2.64
The under-recognized dominance of Verrucomicrobia in soil bacterial communities. Soil Biol Biochem (2011) 2.42
Isolation and characterization of soil bacteria that define Terriglobus gen. nov., in the phylum Acidobacteria. Appl Environ Microbiol (2007) 2.41
Microbial population structures in soil particle size fractions of a long-term fertilizer field experiment. Appl Environ Microbiol (2001) 2.38
Phylogenetic diversity of gram-positive bacteria cultured from marine sediments. Appl Environ Microbiol (2007) 2.36
Succession of bacterial community structure along the Changjiang River determined by denaturing gradient gel electrophoresis and clone library analysis. Appl Environ Microbiol (2002) 2.27
The Structure of Microbial Communities in Soil and the Lasting Impact of Cultivation. Microb Ecol (2001) 2.27
Comparison of diversities and compositions of bacterial populations inhabiting natural forest soils. Appl Environ Microbiol (2004) 2.21
Discovery of the novel candidate phylum "Poribacteria" in marine sponges. Appl Environ Microbiol (2004) 2.13
Changes in bacterial and archaeal community structure and functional diversity along a geochemically variable soil profile. Appl Environ Microbiol (2008) 2.11
Comparison of soil bacterial communities in rhizospheres of three plant species and the interspaces in an arid grassland. Appl Environ Microbiol (2002) 1.98
Use of length heterogeneity PCR and fatty acid methyl ester profiles to characterize microbial communities in soil. Appl Environ Microbiol (2000) 1.82
Effect of pH on isolation and distribution of members of subdivision 1 of the phylum Acidobacteria occurring in soil. Appl Environ Microbiol (2006) 1.69
Microbiological and geochemical heterogeneity in an in situ uranium bioremediation field site. Appl Environ Microbiol (2005) 1.67
Microbial biodiversity: approaches to experimental design and hypothesis testing in primary scientific literature from 1975 to 1999. Microbiol Mol Biol Rev (2002) 1.66
Bacterial community structure and diversity in a century-old manure-treated agroecosystem. Appl Environ Microbiol (2004) 1.58
Response of endophytic bacterial communities in potato plants to infection with Erwinia carotovora subsp. atroseptica. Appl Environ Microbiol (2002) 1.54
Microbiology and geochemistry of great boiling and mud hot springs in the United States Great Basin. Extremophiles (2009) 1.51
Molecular analysis of geographic patterns of eukaryotic diversity in Antarctic soils. Appl Environ Microbiol (2004) 1.49
Genetic diversity of small eukaryotes in lakes differing by their trophic status. Appl Environ Microbiol (2005) 1.39
Serial analysis of rRNA genes and the unexpected dominance of rare members of microbial communities. Appl Environ Microbiol (2007) 1.38
Soil microbial community structure across a thermal gradient following a geothermal heating event. Appl Environ Microbiol (2002) 1.37
Captured diversity in a culture collection: case study of the geographic and habitat distributions of environmental isolates held at the american type culture collection. Appl Environ Microbiol (2005) 1.35
Comparison of soil bacterial communities under diverse agricultural land management and crop production practices. Microb Ecol (2007) 1.34
Comparative analysis of bacterial diversity in freshwater sediment of a shallow eutrophic lake by molecular and improved cultivation-based techniques. Appl Environ Microbiol (2005) 1.33
Endophytic bacterial diversity in rice (Oryza sativa L.) roots estimated by 16S rDNA sequence analysis. Microb Ecol (2007) 1.32
Integron diversity in heavy-metal-contaminated mine tailings and inferences about integron evolution. Appl Environ Microbiol (2004) 1.30
Characterization of microbial communities found in the human vagina by analysis of terminal restriction fragment length polymorphisms of 16S rRNA genes. Appl Environ Microbiol (2005) 1.29
Diversity and abundance of uncultured cytophaga-like bacteria in the Delaware estuary. Appl Environ Microbiol (2003) 1.24
Influence of plant polymers on the distribution and cultivation of bacteria in the phylum Acidobacteria. Appl Environ Microbiol (2010) 1.21
Increase in bacterial community diversity in subsurface aquifers receiving livestock wastewater input. Appl Environ Microbiol (2000) 1.17
Potential of a 16S rRNA-based taxonomic microarray for analyzing the rhizosphere effects of maize on Agrobacterium spp. and bacterial communities. Appl Environ Microbiol (2006) 1.17
Spatiotemporal analysis of bacterial diversity in sediments of Sundarbans using parallel 16S rRNA gene tag sequencing. Microb Ecol (2014) 1.13
Bacterial diversity associated with Blood Falls, a subglacial outflow from the Taylor Glacier, Antarctica. Appl Environ Microbiol (2007) 1.12
Microbial diversity and heterogeneity in sandy subsurface soils. Appl Environ Microbiol (2004) 1.11
Diversity of basidiomycetes in michigan agricultural soils. Appl Environ Microbiol (2006) 1.10
Spatial stratification of soil bacterial populations in aggregates of diverse soils. Microb Ecol (2006) 1.09
Bacteria associated with cysts of the soybean cyst nematode (Heterodera glycines). Appl Environ Microbiol (2003) 1.05
Modeling bacterial species abundance from small community surveys. Microb Ecol (2003) 1.02
Development and validation of a real-time PCR method to quantify rumen protozoa and examination of variability between entodinium populations in sheep offered a hay-based diet. Appl Environ Microbiol (2006) 0.96
The effect of resource islands on abundance and diversity of bacteria in arid soils. Microb Ecol (2011) 0.90
Bacterial population structure of the jute-retting environment. Microb Ecol (2007) 0.89
Molecular approaches: advantages and artifacts in assessing bacterial diversity. J Ind Microbiol Biotechnol (2007) 0.88
High bacterial diversity of biological soil crusts in water tracks over permafrost in the high arctic polar desert. PLoS One (2013) 0.87
Seasonal variation of microbial populations and biomass in Tatachia grassland soils of Taiwan. Environ Geochem Health (2008) 0.87
Carbon utilization profiles of bacteria colonizing the headbox water of two paper machines in a Canadian mill. J Ind Microbiol Biotechnol (2009) 0.87
Biological consequences of ancient gene acquisition and duplication in the large genome of Candidatus Solibacter usitatus Ellin6076. PLoS One (2011) 0.86
Bacterial population dynamics in dairy waste during aerobic and anaerobic treatment and subsequent storage. Appl Environ Microbiol (2006) 0.86
Culture-independent investigation of the microbiome associated with the nematode Acrobeloides maximus. PLoS One (2013) 0.85
An interlaboratory comparison of 16S rRNA gene-based terminal restriction fragment length polymorphism and sequencing methods for assessing microbial diversity of seafloor basalts. Environ Microbiol (2009) 0.85
Influence of seasonal environmental variables on the distribution of presumptive fecal Coliforms around an Antarctic research station. Appl Environ Microbiol (2003) 0.84
Enrichment of specific protozoan populations during in situ bioremediation of uranium-contaminated groundwater. ISME J (2013) 0.83
Bacterial diversity in mine tailings compared by cultivation and cultivation-independent methods and their resistance to lead and cadmium. Microb Ecol (2007) 0.82
Isolation and biodiversity of hitherto undescribed soil bacteria related to Bacillus niacini. Microb Ecol (2004) 0.82
Microbial community analysis in the roots of aquatic plants and isolation of novel microbes including an organism of the candidate phylum OP10. Microbes Environ (2012) 0.82
Effects of plant biomass, plant diversity, and water content on bacterial communities in soil lysimeters: implications for the determinants of bacterial diversity. Appl Environ Microbiol (2007) 0.82
Contribution of the microbial communities detected on an oil painting on canvas to its biodeterioration. PLoS One (2013) 0.81
Microbial secondary succession in soil microcosms of a desert oasis in the Cuatro Cienegas Basin, Mexico. PeerJ (2013) 0.81
Terracidiphilus gabretensis gen. nov., sp. nov., an Abundant and Active Forest Soil Acidobacterium Important in Organic Matter Transformation. Appl Environ Microbiol (2015) 0.80
Microbial and geochemical assessment of bauxitic un-mined and post-mined chronosequence soils from Mocho Mountains, Jamaica. Microb Ecol (2012) 0.79
Comparison of the rhizosphere bacterial communities of Zigongdongdou soybean and a high-methionine transgenic line of this cultivar. PLoS One (2014) 0.77
Comparison of soil bacterial communities of Pinus patula of Nilgiris, western ghats with other biogeographically distant pine forest clone libraries. Microb Ecol (2012) 0.76
Travel, sex, and food: what's speciation got to do with it? Astrobiology (2012) 0.76
Mobile genetic elements in the bacterial phylum Acidobacteria. Mob Genet Elements (2012) 0.75
Novel Phenanthrene-Degrading Bacteria Identified by DNA-Stable Isotope Probing. PLoS One (2015) 0.75
Diverse drug-resistant subpopulations of Mycobacterium tuberculosis are sustained in continuous culture. J R Soc Interface (2016) 0.75
Diversity of Microbial Carbohydrate-Active enZYmes (CAZYmes) Associated with Freshwater and Soil Samples from Caatinga Biome. Microb Ecol (2017) 0.75
Analysis of Bacterial Community Composition of Corroded Steel Immersed in Sanya and Xiamen Seawaters in China via Method of Illumina MiSeq Sequencing. Front Microbiol (2017) 0.75
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