Published in Plant Cell on July 01, 2001
GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox. Plant Physiol (2004) 19.29
Transcriptome analysis of haploid male gametophyte development in Arabidopsis. Genome Biol (2004) 4.83
Comparative analysis of the Arabidopsis pollen transcriptome. Plant Physiol (2003) 4.33
Viral RNA silencing suppressors inhibit the microRNA pathway at an intermediate step. Genes Dev (2004) 3.78
Diurnal changes in the transcriptome encoding enzymes of starch metabolism provide evidence for both transcriptional and posttranscriptional regulation of starch metabolism in Arabidopsis leaves. Plant Physiol (2004) 3.66
Versatile gene-specific sequence tags for Arabidopsis functional genomics: transcript profiling and reverse genetics applications. Genome Res (2004) 3.02
Role of SVP in the control of flowering time by ambient temperature in Arabidopsis. Genes Dev (2007) 2.80
Changes in gene expression in Arabidopsis shoots during phosphate starvation and the potential for developing smart plants. Plant Physiol (2003) 2.73
Transcription analysis of arabidopsis membrane transporters and hormone pathways during developmental and induced leaf senescence. Plant Physiol (2006) 2.57
Genome-wide analysis of hydrogen peroxide-regulated gene expression in Arabidopsis reveals a high light-induced transcriptional cluster involved in anthocyanin biosynthesis. Plant Physiol (2005) 2.46
The beta-subunit of the Arabidopsis G protein negatively regulates auxin-induced cell division and affects multiple developmental processes. Plant Cell (2003) 2.41
Molecular and physiological analysis of drought stress in Arabidopsis reveals early responses leading to acclimation in plant growth. Plant Physiol (2010) 2.19
How to decide? Different methods of calculating gene expression from short oligonucleotide array data will give different results. BMC Bioinformatics (2006) 2.13
Heterosis of biomass production in Arabidopsis. Establishment during early development. Plant Physiol (2004) 1.99
Aphid alarm pheromone produced by transgenic plants affects aphid and parasitoid behavior. Proc Natl Acad Sci U S A (2006) 1.90
Establishing glucose- and ABA-regulated transcription networks in Arabidopsis by microarray analysis and promoter classification using a Relevance Vector Machine. Genome Res (2006) 1.89
Using genomic resources to guide research directions. The arabinogalactan protein gene family as a test case. Plant Physiol (2002) 1.80
Gain-of-function phenotypes of many CLAVATA3/ESR genes, including four new family members, correlate with tandem variations in the conserved CLAVATA3/ESR domain. Plant Physiol (2006) 1.77
Benchmarking the CATMA microarray. A novel tool for Arabidopsis transcriptome analysis. Plant Physiol (2005) 1.76
Root exudation of phytochemicals in Arabidopsis follows specific patterns that are developmentally programmed and correlate with soil microbial functions. PLoS One (2013) 1.75
Overlapping functions of the four class XI myosins in Arabidopsis growth, root hair elongation, and organelle motility. Proc Natl Acad Sci U S A (2008) 1.70
CYP703 is an ancient cytochrome P450 in land plants catalyzing in-chain hydroxylation of lauric acid to provide building blocks for sporopollenin synthesis in pollen. Plant Cell (2007) 1.69
Inferring hypotheses on functional relationships of genes: Analysis of the Arabidopsis thaliana subtilase gene family. PLoS Comput Biol (2005) 1.67
Salicylic acid and NPR1 induce the recruitment of trans-activating TGA factors to a defense gene promoter in Arabidopsis. Plant Cell (2003) 1.65
Arabidopsis trehalose-6-phosphate synthase 1 is essential for normal vegetative growth and transition to flowering. Plant Physiol (2004) 1.64
Transparent soil for imaging the rhizosphere. PLoS One (2012) 1.62
Metabolome analysis of biosynthetic mutants reveals a diversity of metabolic changes and allows identification of a large number of new compounds in Arabidopsis. Plant Physiol (2008) 1.62
The transcription factor ABI4 is a regulator of mitochondrial retrograde expression of ALTERNATIVE OXIDASE1a. Plant Physiol (2009) 1.60
Expression patterns of a novel AtCHX gene family highlight potential roles in osmotic adjustment and K+ homeostasis in pollen development. Plant Physiol (2004) 1.58
Activation tagging using the En-I maize transposon system in Arabidopsis. Plant Physiol (2002) 1.57
Disruption of LACCASE4 and 17 results in tissue-specific alterations to lignification of Arabidopsis thaliana stems. Plant Cell (2011) 1.56
The multifunctional enzyme CYP71B15 (PHYTOALEXIN DEFICIENT3) converts cysteine-indole-3-acetonitrile to camalexin in the indole-3-acetonitrile metabolic network of Arabidopsis thaliana. Plant Cell (2009) 1.56
MS/MS spectral tag-based annotation of non-targeted profile of plant secondary metabolites. Plant J (2009) 1.55
Disruption of the Arabidopsis circadian clock is responsible for extensive variation in the cold-responsive transcriptome. Plant Physiol (2008) 1.47
Perturbation of indole-3-butyric acid homeostasis by the UDP-glucosyltransferase UGT74E2 modulates Arabidopsis architecture and water stress tolerance. Plant Cell (2010) 1.47
Probing the reproducibility of leaf growth and molecular phenotypes: a comparison of three Arabidopsis accessions cultivated in ten laboratories. Plant Physiol (2010) 1.46
The Arabidopsis thaliana homolog of yeast BRE1 has a function in cell cycle regulation during early leaf and root growth. Plant Cell (2007) 1.45
Increased leaf size: different means to an end. Plant Physiol (2010) 1.45
Integrating membrane transport with male gametophyte development and function through transcriptomics. Plant Physiol (2006) 1.45
Developmental stage specificity and the role of mitochondrial metabolism in the response of Arabidopsis leaves to prolonged mild osmotic stress. Plant Physiol (2009) 1.44
The role of bZIP transcription factors in green plant evolution: adaptive features emerging from four founder genes. PLoS One (2008) 1.43
Tissue-specific expression patterns of Arabidopsis NF-Y transcription factors suggest potential for extensive combinatorial complexity. Plant Physiol (2008) 1.41
The Arabidopsis DCR encoding a soluble BAHD acyltransferase is required for cutin polyester formation and seed hydration properties. Plant Physiol (2009) 1.41
Systems-based analysis of Arabidopsis leaf growth reveals adaptation to water deficit. Mol Syst Biol (2012) 1.38
Effect of sugar-induced senescence on gene expression and implications for the regulation of senescence in Arabidopsis. Planta (2006) 1.38
Three Arabidopsis fatty acyl-coenzyme A reductases, FAR1, FAR4, and FAR5, generate primary fatty alcohols associated with suberin deposition. Plant Physiol (2010) 1.37
Transcription factor RAP2.2 and its interacting partner SINAT2: stable elements in the carotenogenesis of Arabidopsis leaves. Plant Physiol (2007) 1.37
Metabolic fluxes in an illuminated Arabidopsis rosette. Plant Cell (2013) 1.36
Molecular basis of N-acetylglucosaminyltransferase I deficiency in Arabidopsis thaliana plants lacking complex N-glycans. Biochem J (2005) 1.36
Arabidopsis peroxisomal citrate synthase is required for fatty acid respiration and seed germination. Plant Cell (2005) 1.35
The effect of experimental warming on leaf functional traits, leaf structure and leaf biochemistry in Arabidopsis thaliana. BMC Plant Biol (2011) 1.34
The membrane-bound NAC transcription factor ANAC013 functions in mitochondrial retrograde regulation of the oxidative stress response in Arabidopsis. Plant Cell (2013) 1.34
A cytosolic pathway for the conversion of hydroxypyruvate to glycerate during photorespiration in Arabidopsis. Plant Cell (2008) 1.32
The Arabidopsis PEX12 gene is required for peroxisome biogenesis and is essential for development. Plant Physiol (2005) 1.32
Whole-plant growth stage ontology for angiosperms and its application in plant biology. Plant Physiol (2006) 1.31
A family of microRNAs present in plants and animals. Plant Cell (2006) 1.30
MIAME/Plant - adding value to plant microarrray experiments. Plant Methods (2006) 1.29
The POLARIS peptide of Arabidopsis regulates auxin transport and root growth via effects on ethylene signaling. Plant Cell (2006) 1.28
Large scale comparative proteomics of a chloroplast Clp protease mutant reveals folding stress, altered protein homeostasis, and feedback regulation of metabolism. Mol Cell Proteomics (2009) 1.27
Trehalose 6-phosphate is required for the onset of leaf senescence associated with high carbon availability. Plant Physiol (2012) 1.27
Salicylate accumulation inhibits growth at chilling temperature in Arabidopsis. Plant Physiol (2004) 1.27
The microRNA156-SQUAMOSA PROMOTER BINDING PROTEIN-LIKE3 module regulates ambient temperature-responsive flowering via FLOWERING LOCUS T in Arabidopsis. Plant Physiol (2012) 1.27
The elongata mutants identify a functional Elongator complex in plants with a role in cell proliferation during organ growth. Proc Natl Acad Sci U S A (2005) 1.26
The chloroplast outer membrane protein CHUP1 interacts with actin and profilin. Planta (2008) 1.26
Distinct signalling pathways and transcriptome response signatures differentiate ammonium- and nitrate-supplied plants. Plant Cell Environ (2010) 1.26
Caterpillar saliva interferes with induced Arabidopsis thaliana defence responses via the systemic acquired resistance pathway. J Exp Bot (2008) 1.25
Genetic manipulation of stomatal density influences stomatal size, plant growth and tolerance to restricted water supply across a growth carbon dioxide gradient. Philos Trans R Soc Lond B Biol Sci (2012) 1.25
New connections across pathways and cellular processes: industrialized mutant screening reveals novel associations between diverse phenotypes in Arabidopsis. Plant Physiol (2008) 1.24
ATM-mediated transcriptional and developmental responses to gamma-rays in Arabidopsis. PLoS One (2007) 1.20
UDP-glucose 4-epimerase isoforms UGE2 and UGE4 cooperate in providing UDP-galactose for cell wall biosynthesis and growth of Arabidopsis thaliana. Plant Cell (2007) 1.20
The Arabidopsis pop2-1 mutant reveals the involvement of GABA transaminase in salt stress tolerance. BMC Plant Biol (2010) 1.19
Phytochrome B and histone deacetylase 6 control light-induced chromatin compaction in Arabidopsis thaliana. PLoS Genet (2009) 1.17
Metabolomics as a Hypothesis-Generating Functional Genomics Tool for the Annotation of Arabidopsis thaliana Genes of "Unknown Function". Front Plant Sci (2012) 1.17
Geminiviruses subvert ubiquitination by altering CSN-mediated derubylation of SCF E3 ligase complexes and inhibit jasmonate signaling in Arabidopsis thaliana. Plant Cell (2011) 1.16
Phenome analysis in plant species using loss-of-function and gain-of-function mutants. Plant Cell Physiol (2009) 1.16
The Arabidopsis PHYTOCHROME KINASE SUBSTRATE2 protein is a phototropin signaling element that regulates leaf flattening and leaf positioning. Plant Physiol (2010) 1.14
Ecological succession and stochastic variation in the assembly of Arabidopsis thaliana phyllosphere communities. MBio (2014) 1.14
Salicylic acid-dependent expression of host genes in compatible Arabidopsis-virus interactions. Plant Physiol (2005) 1.13
Integration of metabolomic and proteomic phenotypes: analysis of data covariance dissects starch and RFO metabolism from low and high temperature compensation response in Arabidopsis thaliana. Mol Cell Proteomics (2008) 1.13
Identification of Rhodococcus fascians cytokinins and their modus operandi to reshape the plant. Proc Natl Acad Sci U S A (2009) 1.13
Arabidopsis roots and shoots show distinct temporal adaptation patterns toward nitrogen starvation. Plant Physiol (2011) 1.13
The family of DOF transcription factors: from green unicellular algae to vascular plants. Mol Genet Genomics (2006) 1.12
Abscisic acid antagonizes ethylene-induced hyponastic growth in Arabidopsis. Plant Physiol (2006) 1.11
Combined genetic and modeling approaches reveal that epidermal cell area and number in leaves are controlled by leaf and plant developmental processes in Arabidopsis. Plant Physiol (2008) 1.11
A universal role for inositol 1,4,5-trisphosphate-mediated signaling in plant gravitropism. Plant Physiol (2005) 1.10
Identification of Arabidopsis cyclase-associated protein 1 as the first nucleotide exchange factor for plant actin. Mol Biol Cell (2007) 1.10
PIF genes mediate the effect of sucrose on seedling growth dynamics. PLoS One (2011) 1.10
Extranuclear protection of chromosomal DNA from oxidative stress. Proc Natl Acad Sci U S A (2011) 1.09
Haemoglobin modulates salicylate and jasmonate/ethylene-mediated resistance mechanisms against pathogens. J Exp Bot (2012) 1.09
Chloroplast 2010: a database for large-scale phenotypic screening of Arabidopsis mutants. Plant Physiol (2011) 1.09
The transcriptome of cis-jasmone-induced resistance in Arabidopsis thaliana and its role in indirect defence. Planta (2010) 1.09
Some like it hot, some like it warm: phenotyping to explore thermotolerance diversity. Plant Sci (2012) 1.09
Expression patterns within the Arabidopsis C/S1 bZIP transcription factor network: availability of heterodimerization partners controls gene expression during stress response and development. Plant Mol Biol (2008) 1.09
IMMUTANS does not act as a stress-induced safety valve in the protection of the photosynthetic apparatus of Arabidopsis during steady-state photosynthesis. Plant Physiol (2006) 1.09
Developmental regulation of CYCA2s contributes to tissue-specific proliferation in Arabidopsis. EMBO J (2011) 1.08
Nitrile-specifier proteins involved in glucosinolate hydrolysis in Arabidopsis thaliana. J Biol Chem (2009) 1.08
Mitochondrial complex II Is essential for gametophyte development in Arabidopsis. Plant Physiol (2007) 1.08
Reactive oxygen species-driven transcription in Arabidopsis under oxygen deprivation. Plant Physiol (2012) 1.08
Transcriptomic analysis of Arabidopsis developing stems: a close-up on cell wall genes. BMC Plant Biol (2009) 1.07
Flower development under drought stress: morphological and transcriptomic analyses reveal acute responses and long-term acclimation in Arabidopsis. Plant Cell (2013) 1.07
Early flower development in Arabidopsis. Plant Cell (1990) 20.67
Exploiting the triple response of Arabidopsis to identify ethylene-related mutants. Plant Cell (1990) 9.76
T-DNA as an insertional mutagen in Arabidopsis. Plant Cell (1999) 7.72
An Arabidopsis mutant defective in the general phenylpropanoid pathway. Plant Cell (1992) 6.39
Isolation and Characterization of a Starchless Mutant of Arabidopsis thaliana (L.) Heynh Lacking ADPglucose Pyrophosphorylase Activity. Plant Physiol (1988) 5.03
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Mutants of Arabidopsis with alterations in seed lipid fatty acid composition. Theor Appl Genet (1990) 2.71
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An Arabidopsis thaliana lipoxygenase gene can be induced by pathogens, abscisic acid, and methyl jasmonate. Plant Physiol (1993) 2.99
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Jasmonic acid signaling modulates ozone-induced hypersensitive cell death. Plant Cell (2000) 2.27
Indications for treatment and classification of 132 carotid-cavernous fistulas. Neurosurgery (1988) 2.20
Promotion by Ethylene of the Capability to Convert 1-Aminocyclopropane-1-carboxylic Acid to Ethylene in Preclimacteric Tomato and Cantaloupe Fruits. Plant Physiol (1985) 2.19
Arabidopsis Rho-related GTPases: differential gene expression in pollen and polar localization in fission yeast. Plant Physiol (1998) 2.18
Neurologic sequelae in the survivors of neonatal intraventricular hemorrhage. Pediatrics (1979) 2.13
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The phenylalanine ammonia-lyase gene family in Arabidopsis thaliana. Plant Mol Biol (1995) 2.11
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Aluminum induces oxidative stress genes in Arabidopsis thaliana. Plant Physiol (1998) 1.94
Role of the phytotoxin coronatine in the infection of Arabidopsis thaliana by Pseudomonas syringae pv. tomato. Mol Plant Microbe Interact (1995) 1.90
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ABC of arterial and venous disease. Swollen lower limb-1: general assessment and deep vein thrombosis. BMJ (2000) 1.62
Primary structure and characterization of an Arabidopsis thaliana calnexin-like protein. J Biol Chem (1993) 1.60
Wheat genes encoding two types of PR-1 proteins are pathogen inducible, but do not respond to activators of systemic acquired resistance. Mol Plant Microbe Interact (1999) 1.58
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Characterization of a gene encoding a Ca(2+)-ATPase-like protein in the plastid envelope. Proc Natl Acad Sci U S A (1993) 1.54
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Computerized axial tomography of intracerebral and intraventricular hemorrhage. Radiology (1974) 1.51
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Characterization of a chloroplast homologue of the 54-kDa subunit of the signal recognition particle. J Biol Chem (1993) 1.47
p53 inhibits alpha 6 beta 4 integrin survival signaling by promoting the caspase 3-dependent cleavage of AKT/PKB. J Cell Biol (1999) 1.46
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Definitive radiation therapy for chordoma and chondrosarcoma of base of skull and cervical spine. J Neurosurg (1982) 1.44
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The Arabidopsis thaliana 4-coumarate:CoA ligase (4CL) gene: stress and developmentally regulated expression and nucleotide sequence of its cDNA. Plant Mol Biol (1995) 1.39
Arabidopsis mutants lacking the 43- and 54-kilodalton subunits of the chloroplast signal recognition particle have distinct phenotypes. Plant Physiol (1999) 1.36
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Expression of a dominant negative form of cpSRP54 inhibits chloroplast biogenesis in Arabidopsis. Plant J (1998) 1.23
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Chloroplast FtsY, chloroplast signal recognition particle, and GTP are required to reconstitute the soluble phase of light-harvesting chlorophyll protein transport into thylakoid membranes. J Biol Chem (1999) 1.17
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Validity and sensitivity of an intravenous bile acid tolerance test in patients with liver disease. N Engl J Med (1975) 1.16
Identification of loci in Arabidopsis that confer resistance to geminivirus infection. Plant J (1994) 1.15
Computed tomography of herpes simplex encephalitis, with clinicopathological correlation. Radiology (1978) 1.15
The L18 domain of light-harvesting chlorophyll proteins binds to chloroplast signal recognition particle 43. J Biol Chem (2000) 1.13
Ozone sensitivity in hybrid poplar correlates with insensitivity to both salicylic acid and jasmonic acid. The role of programmed cell death in lesion formation. Plant Physiol (2000) 1.13
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