Published in Proc Natl Acad Sci U S A on November 06, 2001
Genomic analysis of mouse retinal development. PLoS Biol (2004) 4.66
Natural variation in cardiac metabolism and gene expression in Fundulus heteroclitus. Nat Genet (2004) 2.75
Gene expression comparison of biopsies from Duchenne muscular dystrophy (DMD) and normal skeletal muscle. Proc Natl Acad Sci U S A (2002) 2.60
A new shrinkage estimator for dispersion improves differential expression detection in RNA-seq data. Biostatistics (2012) 2.46
Neutral and adaptive variation in gene expression. Proc Natl Acad Sci U S A (2006) 2.37
Distinct HP1 and Su(var)3-9 complexes bind to sets of developmentally coexpressed genes depending on chromosomal location. Genes Dev (2003) 1.96
Correlation of mRNA and protein levels: cell type-specific gene expression of cluster designation antigens in the prostate. BMC Genomics (2008) 1.95
A global meta-analysis of microarray expression data to predict unknown gene functions and estimate the literature-data divide. Bioinformatics (2009) 1.65
Variation in tissue-specific gene expression among natural populations. Genome Biol (2005) 1.56
Sample matching by inferred agonal stress in gene expression analyses of the brain. BMC Genomics (2007) 1.54
Differential variability analysis of gene expression and its application to human diseases. Bioinformatics (2008) 1.46
Sample size for detecting differentially expressed genes in microarray experiments. BMC Genomics (2004) 1.45
Natural Variation in Fish Transcriptomes: Comparative Analysis of the Fathead Minnow (Pimephales promelas) and Zebrafish (Danio rerio). PLoS One (2014) 1.39
Odorant receptor expressed sequence tags demonstrate olfactory expression of over 400 genes, extensive alternate splicing and unequal expression levels. Genome Biol (2003) 1.33
Cross-species hybridisation of pig RNA to human nylon microarrays. BMC Genomics (2002) 1.29
Identification of coexpressed gene clusters in a comparative analysis of transcriptome and proteome in mouse tissues. Proc Natl Acad Sci U S A (2005) 1.28
Use of a three-color cDNA microarray platform to measure and control support-bound probe for improved data quality and reproducibility. Nucleic Acids Res (2003) 1.25
A study of inter-lab and inter-platform agreement of DNA microarray data. BMC Genomics (2005) 1.24
Gene expression profiling of Duchenne muscular dystrophy skeletal muscle. Neurogenetics (2003) 1.18
Three color cDNA microarrays: quantitative assessment through the use of fluorescein-labeled probes. Nucleic Acids Res (2003) 1.18
The effects of aging on the molecular and cellular composition of the prostate microenvironment. PLoS One (2010) 1.10
Utilization of a labeled tracking oligonucleotide for visualization and quality control of spotted 70-mer arrays. BMC Genomics (2004) 1.10
Variability in the androgen response of prostate epithelium to 5alpha-reductase inhibition: implications for prostate cancer chemoprevention. Cancer Res (2010) 1.07
MicroSAGE is highly representative and reproducible but reveals major differences in gene expression among samples obtained from similar tissues. Genome Biol (2003) 1.07
The influence of tumor size and environment on gene expression in commonly used human tumor lines. BMC Cancer (2004) 1.02
The contributions of normal variation and genetic background to mammalian gene expression. Genome Biol (2006) 1.01
Latent herpes simplex virus infection of sensory neurons alters neuronal gene expression. J Virol (2003) 1.01
Toward a unified biosignature for tuberculosis. Cold Spring Harb Perspect Med (2014) 0.99
DDEC: Dragon database of genes implicated in esophageal cancer. BMC Cancer (2009) 0.97
Comparing transformation methods for DNA microarray data. BMC Bioinformatics (2004) 0.96
Postmortem cardiac tissue maintains gene expression profile even after late harvesting. BMC Genomics (2012) 0.95
Computational and functional analysis of growth hormone (GH)-regulated genes identifies the transcriptional repressor B-cell lymphoma 6 (Bc16) as a participant in GH-regulated transcription. Endocrinology (2009) 0.94
CARMA: A platform for analyzing microarray datasets that incorporate replicate measures. BMC Bioinformatics (2006) 0.92
Gene expression variation between mouse inbred strains. BMC Genomics (2004) 0.91
Construction of predictive promoter models on the example of antibacterial response of human epithelial cells. Theor Biol Med Model (2005) 0.91
Multi-tissue gene-expression analysis in a mouse model of thyroid hormone resistance. Genome Biol (2004) 0.90
Expressed sequence tag profiling identifies developmental and anatomic partitioning of gene expression in the mouse prostate. Genome Biol (2003) 0.90
Reduced tumor necrosis factor receptor-associated death domain expression is associated with prostate cancer progression. Cancer Res (2009) 0.90
Stochastic variation of transcript abundance in C57BL/6J mice. BMC Genomics (2011) 0.89
Intra- and inter-individual variance of gene expression in clinical studies. PLoS One (2012) 0.88
A multiple-loop, double-cube microarray design applied to prostate cancer cell lines with variable sensitivity to histone deacetylase inhibitors. Clin Cancer Res (2008) 0.87
Genetic background influences murine prostate gene expression: implications for cancer phenotypes. Genome Biol (2007) 0.86
High natural gene expression variation in the reef-building coral Acropora millepora: potential for acclimative and adaptive plasticity. BMC Genomics (2013) 0.85
On theoretical models of gene expression evolution with random genetic drift and natural selection. PLoS One (2009) 0.84
Two-stage normalization using background intensities in cDNA microarray data. BMC Bioinformatics (2004) 0.83
Assessment of a systematic expression profiling approach in ENU-induced mouse mutant lines. Mamm Genome (2005) 0.83
Predicting the outcome of infectious diseases: variability among inbred mice as a new and powerful tool for biomarker discovery. MBio (2012) 0.82
Systems analysis of circadian time-dependent neuronal epidermal growth factor receptor signaling. Genome Biol (2006) 0.81
Age-dependent variability in gene expression in male Fischer 344 rat retina. Toxicol Sci (2008) 0.80
Sources of variance in baseline gene expression in the rodent liver. Mutat Res (2012) 0.79
Data recovery and integration from public databases uncovers transformation-specific transcriptional downregulation of cAMP-PKA pathway-encoding genes. BMC Bioinformatics (2009) 0.79
Hits and misses from gene expression ratio measurements in cDNA microarray studies. J Biomol Tech (2002) 0.79
The use of transcriptomics to unveil the role of nutrients in Mammalian liver. ISRN Nutr (2013) 0.78
Expression variation: its relevance to emergence of chronic disease and to therapy. PLoS One (2009) 0.77
mRNA levels in control rat liver display strain-specific, hereditary, and AHR-dependent components. PLoS One (2011) 0.77
Validation and characterization of DNA microarray gene expression data distribution and associated moments. BMC Bioinformatics (2010) 0.76
Gene profiling for defining targets for new therapeutics in autoimmune diseases. Arthritis Res Ther (2003) 0.75
Increased Variability of Genomic Transcription in Schizophrenia. Sci Rep (2015) 0.75
Acute Psychological Stress Modulates the Expression of Enzymes Involved in the Kynurenine Pathway throughout Corticolimbic Circuits in Adult Male Rats. Neural Plast (2015) 0.75
Transcriptome-Level Signatures in Gene Expression and Gene Expression Variability during Bacterial Adaptive Evolution. mSphere (2017) 0.75
Design and Sampling Plan Optimization for RT-qPCR Experiments in Plants: A Case Study in Blueberry. Front Plant Sci (2016) 0.75
Complex Sources of Variation in Tissue Expression Data: Analysis of the GTEx Lung Transcriptome. Am J Hum Genet (2016) 0.75
Generalized shrinkage F-like statistics for testing an interaction term in gene expression analysis in the presence of heteroscedasticity. BMC Bioinformatics (2011) 0.75
Bayesian Inference of Allele-Specific Gene Expression Indicates Abundant cis-regulatory Variation in Natural Flycatcher Populations. Genome Biol Evol (2017) 0.75
The transcriptional program of sporulation in budding yeast. Science (1998) 37.23
Systematic variation in gene expression patterns in human cancer cell lines. Nat Genet (2000) 24.22
Gene expression profile of aging and its retardation by caloric restriction. Science (1999) 8.06
Control of inflammation, cytokine expression, and germinal center formation by BCL-6. Science (1997) 6.58
Yeast microarrays for genome wide parallel genetic and gene expression analysis. Proc Natl Acad Sci U S A (1997) 5.59
Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray. Proc Natl Acad Sci U S A (2000) 5.38
Microarray expression profiling identifies genes with altered expression in HDL-deficient mice. Genome Res (2000) 4.95
Leptin-specific patterns of gene expression in white adipose tissue. Genes Dev (2000) 4.57
Role of ApoCs in lipoprotein metabolism: functional differences between ApoC1, ApoC2, and ApoC3. Arterioscler Thromb Vasc Biol (1999) 2.75
SOCS: physiological suppressors of cytokine signaling. J Cell Sci (2000) 2.69
High density lipoprotein deficiency and foam cell accumulation in mice with targeted disruption of ATP-binding cassette transporter-1. Proc Natl Acad Sci U S A (2000) 2.64
SAP30, a component of the mSin3 corepressor complex involved in N-CoR-mediated repression by specific transcription factors. Mol Cell (1998) 2.60
The BCL-6 POZ domain and other POZ domains interact with the co-repressors N-CoR and SMRT. Oncogene (1998) 2.39
Transcriptional repression of Stat6-dependent interleukin-4-induced genes by BCL-6: specific regulation of iepsilon transcription and immunoglobulin E switching. Mol Cell Biol (1999) 1.91
Expression profiling reveals distinct sets of genes altered during induction and regression of cardiac hypertrophy. Proc Natl Acad Sci U S A (2000) 1.82
Quantitation of RNA using the polymerase chain reaction. Trends Genet (1993) 1.74
Thyroid hormone regulation of hepatic genes in vivo detected by complementary DNA microarray. Mol Endocrinol (2000) 1.73
Catalytic activation of mitogen-activated protein (MAP) kinase phosphatase-1 by binding to p38 MAP kinase: critical role of the p38 C-terminal domain in its negative regulation. Biochem J (2000) 1.35
Prostate short-chain dehydrogenase reductase 1 (PSDR1): a new member of the short-chain steroid dehydrogenase/reductase family highly expressed in normal and neoplastic prostate epithelium. Cancer Res (2001) 1.30
Cloning and expression of two human lysophosphatidic acid acyltransferase cDNAs that enhance cytokine-induced signaling responses in cells. DNA Cell Biol (1997) 1.23
Differential gene expression of livers from ApoE deficient mice. Life Sci (2000) 1.14
Peroxynitrite induces GADD34, 45, and 153 VIA p38 MAPK in human neuroblastoma SH-SY5Y cells. Free Radic Biol Med (2001) 1.13
Expression profiling of acetaminophen liver toxicity in mice using microarray technology. Biochem Biophys Res Commun (2001) 1.12
Identification of genes induced by growth hormone in rat liver using cDNA arrays. Endocrinology (2000) 1.00
Characterization of the human CALM2 calmodulin gene and comparison of the transcriptional activity of CALM1, CALM2 and CALM3. Cell Calcium (1998) 1.00
Pulsatility of growth hormone (GH) signalling in liver cells: role of the JAK-STAT5b pathway in GH action. Growth Horm IGF Res (2000) 0.99
Growth hormone pulse-activated STAT5 signalling: a unique regulatory mechanism governing sexual dimorphism of liver gene expression. Novartis Found Symp (2000) 0.98
Expression profiling in pancreas during the acute phase of pancreatitis using cDNA microarrays. Biochem Biophys Res Commun (2000) 0.90
Isolation of novel mouse genes differentially expressed in brain using cDNA microarray. Biochem Biophys Res Commun (2000) 0.86
Rapid and diverse changes of gene expression in the kidneys of protein-overload proteinuria mice detected by microarray analysis. Nephrol Dial Transplant (2001) 0.86
Adipsin expression and growth in rats as influenced by insulin and somatotropin. Physiol Behav (1993) 0.83
Nonchromosomal antibiotic resistance in bacteria: genetic transformation of Escherichia coli by R-factor DNA. Proc Natl Acad Sci U S A (1972) 57.06
Prevention of a first stroke by transfusions in children with sickle cell anemia and abnormal results on transcranial Doppler ultrasonography. N Engl J Med (1998) 6.88
Chromatin profiling using targeted DNA adenine methyltransferase. Nat Genet (2001) 4.09
HIV quasispecies and resampling. Science (1996) 3.98
Prostate-localized and androgen-regulated expression of the membrane-bound serine protease TMPRSS2. Cancer Res (1999) 3.79
Cell-cell interaction in prostate gene regulation and cytodifferentiation. Proc Natl Acad Sci U S A (1997) 3.22
Experimental investigation of geologically produced antineutrinos with KamLAND. Nature (2005) 2.75
Prognostic impact of discordance between triple-receptor measurements in primary and recurrent breast cancer. Ann Oncol (2009) 2.71
Sequence analysis using logic regression. Genet Epidemiol (2001) 2.69
Widespread collaboration of Isw2 and Sin3-Rpd3 chromatin remodeling complexes in transcriptional repression. Mol Cell Biol (2001) 2.64
Regression calibration in failure time regression. Biometrics (1997) 2.61
Clinical and neuroradiographic manifestations of eastern equine encephalitis. N Engl J Med (1997) 2.55
The load dependence of kinesin's mechanical cycle. Proc Natl Acad Sci U S A (1997) 2.50
Determining cause of death in prostate cancer: are death certificates valid? J Natl Cancer Inst (2001) 2.46
Comparative hybridization of an array of 21,500 ovarian cDNAs for the discovery of genes overexpressed in ovarian carcinomas. Gene (1999) 2.45
Cloning and characterization of two Toll/Interleukin-1 receptor-like genes TIL3 and TIL4: evidence for a multi-gene receptor family in humans. Blood (1998) 2.33
Does cholesterol screening result in negative labeling effects? Results of the Massachusetts Model Systems for Blood Cholesterol Screening Project. Arch Intern Med (1991) 2.14
Stable mixed hematopoietic chimerism after bone marrow transplantation for sickle cell anemia. Biol Blood Marrow Transplant (2001) 2.10
Poor school and cognitive functioning with silent cerebral infarcts and sickle cell disease. Neurology (2001) 1.98
Monitoring gene expression profile changes in ovarian carcinomas using cDNA microarray. Gene (1999) 1.73
Dark matter search results from the CDMS II experiment. Science (2010) 1.57
Cyclosporine neurotoxicity and its relationship to hypertensive encephalopathy: CT and MR findings in 16 cases. AJR Am J Roentgenol (1995) 1.57
Stroke prevention trial in sickle cell anemia. Control Clin Trials (1998) 1.53
Intraoperative MR imaging guidance for intracranial neurosurgery: experience with the first 200 cases. Radiology (1999) 1.50
Analysis of gene expression during myc oncogene-induced lymphomagenesis in the bursa of Fabricius. Proc Natl Acad Sci U S A (2001) 1.48
Post-exercise heart rate recovery in individuals with spinal cord injury. Spinal Cord (2010) 1.45
PEDB: the Prostate Expression Database. Nucleic Acids Res (1999) 1.42
Line scan diffusion imaging: characterization in healthy subjects and stroke patients. AJR Am J Roentgenol (1998) 1.40
Comparison of assay methods for detection of circulating tumor cells in metastatic breast cancer: AdnaGen AdnaTest BreastCancer Select/Detect™ versus Veridex CellSearch™ system. Int J Cancer (2011) 1.38
Prostate short-chain dehydrogenase reductase 1 (PSDR1): a new member of the short-chain steroid dehydrogenase/reductase family highly expressed in normal and neoplastic prostate epithelium. Cancer Res (2001) 1.30
The androgen-regulated type II serine protease TMPRSS2 is differentially expressed and mislocalized in prostate adenocarcinoma. J Pathol (2008) 1.29
Oxidation of methamphetamine and methylenedioxymethamphetamine by CYP2D6. Drug Metab Dispos (1997) 1.23
Pescadillo, a novel cell cycle regulatory protein abnormally expressed in malignant cells. J Biol Chem (2000) 1.23
IL-6 promotes prostate tumorigenesis and progression through autocrine cross-activation of IGF-IR. Oncogene (2011) 1.21
Quality assessment and data analysis for microRNA expression arrays. Nucleic Acids Res (2008) 1.17
Long-term treatment efficacy in primary inflammatory breast cancer by hormonal receptor- and HER2-defined subtypes. Ann Oncol (2013) 1.14
2-Acylglycerolphosphoethanolamine acyltransferase/acyl-acyl carrier protein synthetase is a membrane-associated acyl carrier protein binding protein. J Biol Chem (1989) 1.13
Differential patterns of allelic loss in estrogen receptor-positive infiltrating lobular and ductal breast cancer. Genes Chromosomes Cancer (2008) 1.10
Identification of differentially expressed prostate genes: increased expression of transcription factor ETS-2 in prostate cancer. Prostate (1997) 1.10
Neurocognitive functioning and magnetic resonance imaging in children with sickle cell disease. J Pediatr Psychol (2000) 1.09
Longitudinal MRI in multiple sclerosis: correlation between disability and lesion burden. Neurology (1994) 1.09
Segregation analysis of phenotypic components of learning disabilities. I. Nonword memory and digit span. Am J Hum Genet (2000) 1.08
On the assessment of statistical significance in disease-gene discovery. Am J Hum Genet (1999) 1.07
Dependence estimation over a finite bivariate failure time region. Lifetime Data Anal (2000) 1.07
Evaluation of cerebral aneurysms with helical CT: correlation with conventional angiography and MR angiography. Radiology (1994) 1.06
Familial aggregation of dyslexia phenotypes. Behav Genet (2000) 1.06
New nomenclature for the human tissue kallikrein gene family. Clin Chem (2000) 1.06
Mapping of complex traits by single-nucleotide polymorphisms. Am J Hum Genet (1998) 1.05
The evolution of multiple sclerosis lesions on serial MR. AJNR Am J Neuroradiol (1995) 1.02
Virtual laryngoscopy. Ann Otol Rhinol Laryngol (1999) 1.00
Functional MRI of the lumbar spine in erect position in a superconducting open-configuration MR system: preliminary results. J Magn Reson Imaging (1999) 1.00
EPLIN downregulation promotes epithelial-mesenchymal transition in prostate cancer cells and correlates with clinical lymph node metastasis. Oncogene (2011) 1.00
PART-1: a novel human prostate-specific, androgen-regulated gene that maps to chromosome 5q12. Cancer Res (2000) 1.00
Myosin: immunofluorescent localization in neuronal and glial cultures. Science (1978) 1.00
Age-related alterations in the rodent brain cholinergic system and behavior. Neurobiol Aging (1980) 1.00
Profiling influences of senescent and aged fibroblasts on prostate carcinogenesis. Br J Cancer (2008) 0.97
2-acylglycerophosphoethanolamine acyltransferase/acyl-[acyl-carrier- protein] synthetase from Escherichia coli. Methods Enzymol (1992) 0.97
Toll receptors: an expanding role in our understanding of human disease. J Leukoc Biol (2000) 0.96
Comparison of simultaneous active and passive AIDS case reporting in San Francisco. J Acquir Immune Defic Syndr (2000) 0.95
Gene expression array testing of FFPE archival breast tumor samples: an optimized protocol for WG-DASL sample preparation. Breast Cancer Res Treat (2010) 0.95
Circulating tumor cells in metastatic inflammatory breast cancer. Ann Oncol (2009) 0.93
Mapping alcoholism genes using linkage/linkage disequilibrium analysis. Genet Epidemiol (1999) 0.90
Clinical benefit from neoadjuvant chemotherapy in oestrogen receptor-positive invasive ductal and lobular carcinomas. Br J Cancer (2013) 0.90
Ki67 expression in the primary tumor predicts for clinical benefit and time to progression on first-line endocrine therapy in estrogen receptor-positive metastatic breast cancer. Breast Cancer Res Treat (2012) 0.90
Overcorrection treatment for radical reduction of aggressive-disruptive behavior in institutionalized mental patients. Psychol Rep (1974) 0.90
A novel mechanism for chaperone-mediated telomerase regulation during prostate cancer progression. Cancer Res (2001) 0.89
Seroprevalence of and risk factors for hepatitis A infection among young homosexual and bisexual men. J Infect Dis (1997) 0.88
Genomic instability during Myc-induced lymphomagenesis in the bursa of Fabricius. Oncogene (2006) 0.88
Letter: Racial disparity of plasma volume in hypertensive man. Ann Intern Med (1976) 0.87
In vitro activity of doripenem and other carbapenems against contemporary Gram-negative pathogens isolated from hospitalised patients in the Asia-Pacific region: results of the COMPACT Asia-Pacific Study. Int J Antimicrob Agents (2010) 0.87
Posttraumatic stress disorder in veterans with spinal cord injury: trauma-related risk factors. J Trauma Stress (1998) 0.87
A new variant of the anion transport protein in human erythrocytes. Biochemistry (1985) 0.86
Multifocality and multicentricity in breast cancer and survival outcomes. Ann Oncol (2012) 0.86
Impact of socioeconomic status on survival with AIDS. Am J Epidemiol (1998) 0.86
Acute exercise enhances receptor-mediated endothelium-dependent vasodilation by receptor upregulation. J Biomed Sci (1999) 0.85
A comparison of posttraumatic stress disorder in veterans with and without spinal cord injury. J Abnorm Psychol (1998) 0.85
Branching fraction and photon energy spectrum for b --> s gamma. Phys Rev Lett (2001) 0.85
Age related changes in auto-erythrocyte rosettes in the C57BL/6J and NZB/BINJ mice. Mech Ageing Dev (1979) 0.85
Image-guided surgery in a new magnetic resonance suite: preclinical considerations. Laryngoscope (1996) 0.84
Catabolism of the anion transport protein in human erythrocytes. Biochemistry (1985) 0.84
Family functioning and social support in the adaptation of caregivers of children with sickle cell syndromes. J Pediatr Psychol (1998) 0.84
Intra-operative MR guidance during trans-sphenoidal pituitary resection: preliminary results. J Magn Reson Imaging (2001) 0.84
Risk-resistance adaptation model for caregivers and their children with sickle cell syndromes. Ann Behav Med (2000) 0.84
Subunit interactions of rabbit muscle aldolase. Conformational change of aldolase in magnesium chloride and its relationship to the dissociation of subunits. J Mol Biol (1975) 0.83
Analysis of quantitative risk factors for a common oligogenic disease. Genet Epidemiol (1995) 0.83
Effects of age at onset on the power of the affected sib pair and transmission/disequilibrium tests. Ann Hum Genet (2000) 0.82
Interferon regulatory factor-1 regulates reconstituted extracellular matrix (rECM)-mediated apoptosis in human mammary epithelial cells. Oncogene (2006) 0.82
Patterns of circulating hepatitis B surface antigen variants among vaccinated children born to hepatitis B surface antigen carrier and non-carrier mothers. A population-based comparative study. J Biomed Sci (1998) 0.81
Results from a low-energy analysis of the CDMS II germanium data. Phys Rev Lett (2011) 0.81
The effect of prior trauma exposure on the development of PTSD following spinal cord injury. J Anxiety Disord (2000) 0.81
Cholinesterase enzymes in the blood of patients with Alzheimer's disease. Life Sci (1982) 0.81
An electronmicroscopic analysis of the optic nerve in the golden hamster. J Comp Neurol (1979) 0.80
Functional variants of the lipoprotein lipase gene and the risk of preeclampsia among non-Hispanic Caucasian women. Clin Genet (2006) 0.80
Fetal growth and placental diffusing capacity in guinea pigs following long-term maternal exercise. J Dev Physiol (1983) 0.79
From genomics to proteomics: techniques and applications in cancer research. Trends Cell Biol (2001) 0.79
Inexpensive handheld device for the construction of high-density nucleic acid arrays. Biotechniques (1997) 0.79
The secular trend in the growth of southern Chinese girls in Hong Kong. Z Morphol Anthropol (1981) 0.79