The methionine salvage pathway in Bacillus subtilis.

PubWeight™: 1.48‹?› | Rank: Top 5%

🔗 View Article (PMC 113757)

Published in BMC Microbiol on April 25, 2002

Authors

Agnieszka Sekowska1, Antoine Danchin

Author Affiliations

1: HKU-Pasteur Research Centre, Dexter HC Man Building, 8, Sassoon Road, Pokfulam, Hong Kong, China. sekowska@hkucc.hku.hk

Articles citing this

Comparative genomics of the methionine metabolism in Gram-positive bacteria: a variety of regulatory systems. Nucleic Acids Res (2004) 1.94

Function, structure, and evolution of the RubisCO-like proteins and their RubisCO homologs. Microbiol Mol Biol Rev (2007) 1.89

Complete genome sequence of the aerobic CO-oxidizing thermophile Thermomicrobium roseum. PLoS One (2009) 1.83

On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales. Proc Natl Acad Sci U S A (2009) 1.78

Comparative genomic analysis of T-box regulatory systems in bacteria. RNA (2008) 1.75

Natural variability in S-adenosylmethionine (SAM)-dependent riboswitches: S-box elements in bacillus subtilis exhibit differential sensitivity to SAM In vivo and in vitro. J Bacteriol (2007) 1.73

Bacterial variations on the methionine salvage pathway. BMC Microbiol (2004) 1.68

Highly plastic genome of Microcystis aeruginosa PCC 7806, a ubiquitous toxic freshwater cyanobacterium. BMC Genomics (2008) 1.66

Global expression profile of Bacillus subtilis grown in the presence of sulfate or methionine. J Bacteriol (2002) 1.45

Three different systems participate in L-cystine uptake in Bacillus subtilis. J Bacteriol (2004) 1.40

Global control of cysteine metabolism by CymR in Bacillus subtilis. J Bacteriol (2006) 1.24

Conversion of methionine to cysteine in Bacillus subtilis and its regulation. J Bacteriol (2006) 1.14

A RubisCO-like protein links SAM metabolism with isoprenoid biosynthesis. Nat Chem Biol (2012) 1.13

Methionine regeneration and aminotransferases in Bacillus subtilis, Bacillus cereus, and Bacillus anthracis. J Bacteriol (2003) 1.06

Insights into the stress response and sulfur metabolism revealed by proteome analysis of a Chlorobium tepidum mutant lacking the Rubisco-like protein. Photosynth Res (2003) 1.02

Hierarchical expression of genes controlled by the Bacillus subtilis global regulatory protein CodY. Proc Natl Acad Sci U S A (2014) 0.97

Phloem-specific expression of Yang cycle genes and identification of novel Yang cycle enzymes in Plantago and Arabidopsis. Plant Cell (2011) 0.96

Regulation of the Bacillus subtilis ytmI operon, involved in sulfur metabolism. J Bacteriol (2005) 0.95

Crystal structure of 5-methylthioribose 1-phosphate isomerase product complex from Bacillus subtilis: implications for catalytic mechanism. Protein Sci (2008) 0.91

Functional identification of APIP as human mtnB, a key enzyme in the methionine salvage pathway. PLoS One (2012) 0.91

Functional analysis of methylthioribose kinase genes in plants. Plant Physiol (2004) 0.88

Enzymatic characterization of AMP phosphorylase and ribose-1,5-bisphosphate isomerase functioning in an archaeal AMP metabolic pathway. J Bacteriol (2012) 0.86

Specialized microbial databases for inductive exploration of microbial genome sequences. BMC Genomics (2005) 0.85

1+1 = 3: a fusion of 2 enzymes in the methionine salvage pathway of Tetrahymena thermophila creates a trifunctional enzyme that catalyzes 3 steps in the pathway. PLoS Genet (2009) 0.84

The MetJ regulon in gammaproteobacteria determined by comparative genomics methods. BMC Genomics (2011) 0.84

Branched-chain amino acid aminotransferase and methionine formation in Mycobacterium tuberculosis. BMC Microbiol (2004) 0.80

Integration of untargeted metabolomics with transcriptomics reveals active metabolic pathways. Metabolomics (2014) 0.77

Mechanistic diversity in the RuBisCO superfamily: RuBisCO from Rhodospirillum rubrum is not promiscuous for reactions catalyzed by RuBisCO-like proteins. Biochemistry (2012) 0.77

MtnBD is a multifunctional fusion enzyme in the methionine salvage pathway of Tetrahymena thermophila. PLoS One (2013) 0.76

Metabolic Regulation as a Consequence of Anaerobic 5-Methylthioadenosine Recycling in Rhodospirillum rubrum. MBio (2016) 0.75

Crystallization and preliminary X-ray analysis of 2,3-diketo-5-methylthiopentyl-1-phosphate enolase from Bacillus subtilis. Acta Crystallogr Sect F Struct Biol Cryst Commun (2009) 0.75

Spermidine promotes Bacillus subtilis biofilm formation by activating expression of the matrix regulator slrR. J Biol Chem (2017) 0.75

Articles cited by this

The Pfam protein families database. Nucleic Acids Res (2002) 51.34

TRANSFORMATION OF BIOCHEMICALLY DEFICIENT STRAINS OF BACILLUS SUBTILIS BY DEOXYRIBONUCLEATE. Proc Natl Acad Sci U S A (1958) 50.05

Studies on lysogenesis. I. The mode of phage liberation by lysogenic Escherichia coli. J Bacteriol (1951) 28.27

A vector for systematic gene inactivation in Bacillus subtilis. Microbiology (1998) 8.00

Salt stress is an environmental signal affecting degradative enzyme synthesis in Bacillus subtilis. J Bacteriol (1995) 3.66

Signal transduction pathway controlling synthesis of a class of degradative enzymes in Bacillus subtilis: expression of the regulatory genes and analysis of mutations in degS and degU. J Bacteriol (1990) 3.57

mRNA splicing efficiency in yeast and the contribution of nonconserved sequences. Cell (1985) 3.42

The S box regulon: a new global transcription termination control system for methionine and cysteine biosynthesis genes in gram-positive bacteria. Mol Microbiol (1998) 3.25

Nucleotide sequence of a spectinomycin adenyltransferase AAD(9) determinant from Staphylococcus aureus and its relationship to AAD(3") (9). Mol Gen Genet (1985) 3.08

Easy cloning of mini-Tn10 insertions from the Bacillus subtilis chromosome. J Bacteriol (1994) 2.53

A xylose-inducible Bacillus subtilis integration vector and its application. Gene (1996) 2.36

A ribulose-1,5-bisphosphate carboxylase/oxygenase (RubisCO)-like protein from Chlorobium tepidum that is involved with sulfur metabolism and the response to oxidative stress. Proc Natl Acad Sci U S A (2001) 1.94

Use of chromosomal integration in the establishment and expression of blaZ, a Staphylococcus aureus beta-lactamase gene, in Bacillus subtilis. J Bacteriol (1984) 1.87

The methionine salvage pathway in Klebsiella pneumoniae and rat liver. Identification and characterization of two novel dioxygenases. J Biol Chem (1995) 1.33

Quod erat demonstrandum? The mystery of experimental validation of apparently erroneous computational analyses of protein sequences. Genome Biol (2001) 1.30

Mechanistic studies of two dioxygenases in the methionine salvage pathway of Klebsiella pneumoniae. Biochemistry (2001) 1.28

5'-Methylthioadenosine and related compounds as precursors of S-adenosylmethionine in yeast. Biochim Biophys Acta (1973) 1.27

The metIC operon involved in methionine biosynthesis in Bacillus subtilis is controlled by transcription antitermination. Microbiology (2002) 1.25

Identification of yrrU as the methylthioadenosine nucleosidase gene in Bacillus subtilis. DNA Res (1999) 1.23

Phylogeny of related functions: the case of polyamine biosynthetic enzymes. Microbiology (2000) 1.19

Analogs of 5-methylthioribose, a novel class of antiprotozoal agents. Antimicrob Agents Chemother (1988) 1.17

KapB is a lipoprotein required for KinB signal transduction and activation of the phosphorelay to sporulation in Bacillus subtilis. Mol Microbiol (1997) 1.13

MtnK, methylthioribose kinase, is a starvation-induced protein in Bacillus subtilis. BMC Microbiol (2001) 1.13

Tyrosine aminotransferase catalyzes the final step of methionine recycling in Klebsiella pneumoniae. J Bacteriol (1999) 1.04

Intermediates in the conversion of 5'-S-methylthioadenosine to methionine in Klebsiella pneumoniae. J Biol Chem (1988) 1.03

Selective killing of Klebsiella pneumoniae by 5-trifluoromethylthioribose. Chemotherapeutic exploitation of the enzyme 5-methylthioribose kinase. J Biol Chem (1990) 1.03

Conversion of 5-S-methyl-5-thio-D-ribose to methionine in Klebsiella pneumoniae. Stable isotope incorporation studies of the terminal enzymatic reactions in the pathway. J Biol Chem (1990) 1.02

Biological production of 5-methylthioribose. Can J Microbiol (1973) 1.02

Articles by these authors

(truncated to the top 100)

Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths. PLoS Genet (2009) 8.51

Open-source genomic analysis of Shiga-toxin-producing E. coli O104:H4. N Engl J Med (2011) 7.11

The genome sequence of the entomopathogenic bacterium Photorhabdus luminescens. Nat Biotechnol (2003) 6.11

Unique physiological and pathogenic features of Leptospira interrogans revealed by whole-genome sequencing. Nature (2003) 5.04

Nucleotide sequence database policies. Science (2002) 4.72

Genome-based analysis of virulence genes in a non-biofilm-forming Staphylococcus epidermidis strain (ATCC 12228). Mol Microbiol (2003) 3.86

Cross-host evolution of severe acute respiratory syndrome coronavirus in palm civet and human. Proc Natl Acad Sci U S A (2005) 3.37

Base composition bias might result from competition for metabolic resources. Trends Genet (2002) 3.17

SubtiList: the reference database for the Bacillus subtilis genome. Nucleic Acids Res (2002) 2.99

Universal biases in protein composition of model prokaryotes. Proteins (2005) 2.90

Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125. Genome Res (2005) 2.89

An analysis of determinants of amino acids substitution rates in bacterial proteins. Mol Biol Evol (2003) 2.63

From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Microbiology (2009) 2.62

Essentiality, not expressiveness, drives gene-strand bias in bacteria. Nat Genet (2003) 2.24

Gene essentiality determines chromosome organisation in bacteria. Nucleic Acids Res (2003) 1.74

GadE (YhiE): a novel activator involved in the response to acid environment in Escherichia coli. Microbiology (2004) 1.71

Bacterial variations on the methionine salvage pathway. BMC Microbiol (2004) 1.68

How essential are nonessential genes? Mol Biol Evol (2005) 1.63

A tale of two oxidation states: bacterial colonization of arsenic-rich environments. PLoS Genet (2007) 1.59

S-box and T-box riboswitches and antisense RNA control a sulfur metabolic operon of Clostridium acetobutylicum. Nucleic Acids Res (2008) 1.47

Global expression profile of Bacillus subtilis grown in the presence of sulfate or methionine. J Bacteriol (2002) 1.45

Three different systems participate in L-cystine uptake in Bacillus subtilis. J Bacteriol (2004) 1.40

The Trw type IV secretion system of Bartonella mediates host-specific adhesion to erythrocytes. PLoS Pathog (2010) 1.37

Persistence drives gene clustering in bacterial genomes. BMC Genomics (2008) 1.37

Synthetic biology: discovering new worlds and new words. EMBO Rep (2008) 1.35

Re-annotation of genome microbial coding-sequences: finding new genes and inaccurately annotated genes. BMC Bioinformatics (2002) 1.33

YtqI from Bacillus subtilis has both oligoribonuclease and pAp-phosphatase activity. Nucleic Acids Res (2007) 1.29

Structure-based discovery of inhibitors of the YycG histidine kinase: new chemical leads to combat Staphylococcus epidermidis infections. BMC Microbiol (2006) 1.27

The metIC operon involved in methionine biosynthesis in Bacillus subtilis is controlled by transcription antitermination. Microbiology (2002) 1.25

Identification, characterization, and regulation of a cluster of genes involved in carbapenem biosynthesis in Photorhabdus luminescens. Appl Environ Microbiol (2002) 1.25

Global control of cysteine metabolism by CymR in Bacillus subtilis. J Bacteriol (2006) 1.24

Molecular diagnosis of human cancer type by gene expression profiles and independent component analysis. Eur J Hum Genet (2005) 1.21

The PhoP-PhoQ two-component regulatory system of Photorhabdus luminescens is essential for virulence in insects. J Bacteriol (2004) 1.21

Genomics of an extreme psychrophile, Psychromonas ingrahamii. BMC Genomics (2008) 1.19

Was photosynthetic RuBisCO recruited by acquisitive evolution from RuBisCO-like proteins involved in sulfur metabolism? Res Microbiol (2005) 1.16

Conversion of methionine to cysteine in Bacillus subtilis and its regulation. J Bacteriol (2006) 1.14

Degradation of nanoRNA is performed by multiple redundant RNases in Bacillus subtilis. Nucleic Acids Res (2009) 1.10

Codon usage domains over bacterial chromosomes. PLoS Comput Biol (2006) 1.09

Regulation of bacterial motility in response to low pH in Escherichia coli: the role of H-NS protein. Microbiology (2002) 1.08

Identification of Bacillus subtilis CysL, a regulator of the cysJI operon, which encodes sulfite reductase. J Bacteriol (2002) 1.08

Conserved transcription factor binding sites of cancer markers derived from primary lung adenocarcinoma microarrays. Nucleic Acids Res (2005) 1.07

Small noncoding RNA GcvB is a novel regulator of acid resistance in Escherichia coli. BMC Genomics (2009) 1.07

The metNPQ operon of Bacillus subtilis encodes an ABC permease transporting methionine sulfoxide, D- and L-methionine. Res Microbiol (2004) 1.06

RuBisCO-like proteins as the enolase enzyme in the methionine salvage pathway: functional and evolutionary relationships between RuBisCO-like proteins and photosynthetic RuBisCO. J Exp Bot (2008) 1.05

Relationship of SARS-CoV to other pathogenic RNA viruses explored by tetranucleotide usage profiling. BMC Bioinformatics (2003) 1.05

Oligoribonuclease is a common downstream target of lithium-induced pAp accumulation in Escherichia coli and human cells. Nucleic Acids Res (2006) 1.05

The secE gene of Helicobacter pylori. J Bacteriol (2002) 1.04

From essential to persistent genes: a functional approach to constructing synthetic life. Trends Genet (2012) 1.04

RcsB plays a central role in H-NS-dependent regulation of motility and acid stress resistance in Escherichia coli. Res Microbiol (2010) 1.03

CymR, the master regulator of cysteine metabolism in Staphylococcus aureus, controls host sulphur source utilization and plays a role in biofilm formation. Mol Microbiol (2009) 1.03

Spx mediates oxidative stress regulation of the methionine sulfoxide reductases operon in Bacillus subtilis. BMC Microbiol (2008) 1.01

Exploring the Penicillium marneffei genome. Arch Microbiol (2003) 1.01

Conserved genes in a path from commensalism to pathogenicity: comparative phylogenetic profiles of Staphylococcus epidermidis RP62A and ATCC12228. BMC Genomics (2006) 1.01

The CymR regulator in complex with the enzyme CysK controls cysteine metabolism in Bacillus subtilis. J Biol Chem (2008) 1.01

Hon-yaku: a biology-driven Bayesian methodology for identifying translation initiation sites in prokaryotes. BMC Bioinformatics (2007) 1.00

Distinct co-evolution patterns of genes associated to DNA polymerase III DnaE and PolC. BMC Genomics (2012) 0.97

Proteomics of life at low temperatures: trigger factor is the primary chaperone in the Antarctic bacterium Pseudoalteromonas haloplanktis TAC125. Mol Microbiol (2010) 0.96

The two authentic methionine aminopeptidase genes are differentially expressed in Bacillus subtilis. BMC Microbiol (2005) 0.95

Regulation of the Bacillus subtilis ytmI operon, involved in sulfur metabolism. J Bacteriol (2005) 0.95

Characterization of NrnA homologs from Mycobacterium tuberculosis and Mycoplasma pneumoniae. RNA (2011) 0.94

An updated metabolic view of the Bacillus subtilis 168 genome. Microbiology (2013) 0.93

Genomic changes in nucleotide and dinucleotide frequencies in Pasteurella multocida cultured under high temperature. Genetics (2002) 0.93

Decrypting the H-NS-dependent regulatory cascade of acid stress resistance in Escherichia coli. BMC Microbiol (2010) 0.93

The ten grand challenges of synthetic life. Syst Synth Biol (2011) 0.91

Pleiotropic role of quorum-sensing autoinducer 2 in Photorhabdus luminescens. Appl Environ Microbiol (2006) 0.91

Hydrothermally generated aromatic compounds are consumed by bacteria colonizing in Atlantis II Deep of the Red Sea. ISME J (2011) 0.91

Transcription regulation coupling of the divergent argG and metY promoters in Escherichia coli K-12. J Bacteriol (2003) 0.90

Proteome analysis of the phenotypic variation process in Photorhabdus luminescens. Proteomics (2006) 0.90

AstR-AstS, a new two-component signal transduction system, mediates swarming, adaptation to stationary phase and phenotypic variation in Photorhabdus luminescens. Microbiology (2004) 0.90

The regulation of Enzyme IIA(Glc) expression controls adenylate cyclase activity in Escherichia coli. Microbiology (2002) 0.90

Regulatory role of UvrY in adaptation of Photorhabdus luminescens growth inside the insect. Environ Microbiol (2008) 0.89

A strand-specific model for chromosome segregation in bacteria. Mol Microbiol (2003) 0.89

Identification of genes and proteins involved in the pleiotropic response to arsenic stress in Caenibacter arsenoxydans, a metalloresistant beta-proteobacterium with an unsequenced genome. Biochimie (2005) 0.88

Identification of a novel nanoRNase in Bartonella. Microbiology (2012) 0.88

Cinnamic acid, an autoinducer of its own biosynthesis, is processed via Hca enzymes in Photorhabdus luminescens. Appl Environ Microbiol (2008) 0.87

Life's demons: information and order in biology. What subcellular machines gather and process the information necessary to sustain life? EMBO Rep (2011) 0.87

Structural and functional similarities between a ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCO)-like protein from Bacillus subtilis and photosynthetic RuBisCO. J Biol Chem (2009) 0.87

Use of a riboswitch-controlled conditional hypomorphic mutation to uncover a role for the essential csrA gene in bacterial autoaggregation. J Biol Chem (2009) 0.86

Specialized microbial databases for inductive exploration of microbial genome sequences. BMC Genomics (2005) 0.85

Proteomic identification of a two-component regulatory system in Pseudoalteromonas haloplanktis TAC125. Extremophiles (2006) 0.85

Life in the cold: a proteomic study of cold-repressed proteins in the antarctic bacterium pseudoalteromonas haloplanktis TAC125. Appl Environ Microbiol (2011) 0.85

Bacterial niche-specific genome expansion is coupled with highly frequent gene disruptions in deep-sea sediments. PLoS One (2011) 0.84

Persistent biases in the amino acid composition of prokaryotic proteins. Bioessays (2006) 0.84

Cytosine methylation is not the major factor inducing CpG dinucleotide deficiency in bacterial genomes. J Mol Evol (2004) 0.82

The HcaR regulatory protein of Photorhabdus luminescens affects the production of proteins involved in oxidative stress and toxemia. Proteomics (2007) 0.82

Paralogous metabolism: S-alkyl-cysteine degradation in Bacillus subtilis. Environ Microbiol (2013) 0.82

A double epidemic model for the SARS propagation. BMC Infect Dis (2003) 0.81

Potent and selective inhibitors of Staphylococcus epidermidis tryptophanyl-tRNA synthetase. J Antimicrob Chemother (2007) 0.81

Effect of mild acid pH on the functioning of bacterial membranes in Vibrio cholerae. Proteomics (2002) 0.81

UMP kinase from the Gram-positive bacterium Bacillus subtilis is strongly dependent on GTP for optimal activity. Eur J Biochem (2003) 0.81

3'-5' phosphoadenosine phosphate is an inhibitor of PARP-1 and a potential mediator of the lithium-dependent inhibition of PARP-1 in vivo. Biochem J (2012) 0.81

Genomes are covered with ubiquitous 11 bp periodic patterns, the "class A flexible patterns". BMC Bioinformatics (2005) 0.80

3-phenylpropionate catabolism and the Escherichia coli oxidative stress response. Res Microbiol (2005) 0.80

Classification between normal and tumor tissues based on the pair-wise gene expression ratio. BMC Cancer (2004) 0.80

Cytoplasmic and periplasmic proteomic signatures of exponentially growing cells of the psychrophilic bacterium Pseudoalteromonas haloplanktis TAC125. Appl Environ Microbiol (2010) 0.80

Visualizing the proteome of Escherichia coli: an efficient and versatile method for labeling chromosomal coding DNA sequences (CDSs) with fluorescent protein genes. Nucleic Acids Res (2007) 0.79

A Novel H-NS-like protein from an antarctic psychrophilic bacterium reveals a crucial role for the N-terminal domain in thermal stability. J Biol Chem (2003) 0.79

Linking selenium biogeochemistry to the sulfur-dependent biological detoxification of arsenic. Environ Microbiol (2012) 0.79

A variable gene in a conserved region of the Helicobacter pylori genome: isotopic gene replacement or rapid evolution? DNA Res (2008) 0.78

PssA is required for alpha-amylase secretion in Antarctic Pseudoalteromonas haloplanktis. Microbiology (2009) 0.77