Published in J Biol Chem on July 30, 2003
Structure, function and mechanism of exocyclic DNA methyltransferases. Biochem J (2006) 1.07
Characterization of extended-host-range pseudo-T-even bacteriophage Kpp95 isolated on Klebsiella pneumoniae. Appl Environ Microbiol (2007) 0.90
A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes. Nucleic Acids Res (2003) 7.56
Remarkable loop flexibility in avian influenza N1 and its implications for antiviral drug design. J Am Chem Soc (2007) 1.65
Laser-Activated Gene Silencing via Gold Nanoshell-siRNA Conjugates. ACS Nano (2009) 1.61
Transition from nonspecific to specific DNA interactions along the substrate-recognition pathway of dam methyltransferase. Cell (2005) 1.36
Fabrication of Ag@SiO(2)@Y(2)O(3):Er nanostructures for bioimaging: tuning of the upconversion fluorescence with silver nanoparticles. J Am Chem Soc (2010) 1.35
Mutations in DNA methyltransferase (DNMT3A) observed in acute myeloid leukemia patients disrupt processive methylation. J Biol Chem (2012) 1.23
The inherent processivity of the human de novo methyltransferase 3A (DNMT3A) is enhanced by DNMT3L. J Biol Chem (2010) 1.14
Controlled spacing of cationic gold nanoparticles by nanocrown RNA. J Am Chem Soc (2005) 1.09
Reagentless, electrochemical approach for the specific detection of double- and single-stranded DNA binding proteins. Anal Chem (2009) 1.08
DNA cytosine C5 methyltransferase Dnmt1: catalysis-dependent release of allosteric inhibition. Biochemistry (2005) 1.06
Simultaneous DNA binding and bending by EcoRV endonuclease observed by real-time fluorescence. Biochemistry (2003) 1.06
The mechanism of target base attack in DNA cytosine carbon 5 methylation. Biochemistry (2004) 1.06
Structure of the bacteriophage T4 DNA adenine methyltransferase. Nat Struct Biol (2003) 1.02
Detection of sequence-specific protein-DNA interactions via surface enhanced resonance Raman scattering. J Am Chem Soc (2007) 1.01
Statistical coevolution analysis and molecular dynamics: identification of amino acid pairs essential for catalysis. Proc Natl Acad Sci U S A (2005) 1.01
The early expressed HIV-1 genes regulate DNMT1 expression. Epigenetics (2008) 1.00
Mapping local pH in live cells using encapsulated fluorescent SERS nanotags. Small (2010) 1.00
Oligomerization of DNMT3A controls the mechanism of de novo DNA methylation. J Biol Chem (2011) 0.99
The role of high affinity non-specific DNA binding by Lrp in transcriptional regulation and DNA organization. J Mol Biol (2007) 0.98
Formation of m2G6 in Methanocaldococcus jannaschii tRNA catalyzed by the novel methyltransferase Trm14. Nucleic Acids Res (2011) 0.96
Identification of a second DNA binding site in human DNA methyltransferase 3A by substrate inhibition and domain deletion. Arch Biochem Biophys (2010) 0.96
Cell-targeted self-assembled DNA nanostructures. J Am Chem Soc (2009) 0.95
The role of Arg165 towards base flipping, base stabilization and catalysis in M.HhaI. J Mol Biol (2006) 0.95
GATC flanking sequences regulate Dam activity: evidence for how Dam specificity may influence pap expression. J Mol Biol (2005) 0.93
RNA modulation of the human DNA methyltransferase 3A. Nucleic Acids Res (2012) 0.93
Chemically patterned microspheres for controlled nanoparticle assembly in the construction of SERS hot spots. J Am Chem Soc (2007) 0.92
Selective inhibitors of bacterial DNA adenine methyltransferases. J Biomol Screen (2006) 0.92
Competitive Lrp and Dam assembly at the pap regulatory region: implications for mechanisms of epigenetic regulation. J Mol Biol (2008) 0.92
Facile synthesis of naphthoquinone spiroketals by diastereoselective oxidative [3 + 2] cycloaddition. Org Lett (2007) 0.91
Tracking transcription factor complexes on DNA using total internal reflectance fluorescence protein binding microarrays. Nucleic Acids Res (2009) 0.91
Specific and sensitive detection of nucleic acids and RNases using gold nanoparticle-RNA-fluorescent dye conjugates. Chem Commun (Camb) (2007) 0.90
A heterogeneous PNA-based SERS method for DNA detection. J Am Chem Soc (2007) 0.90
Transcription factor beacons for the quantitative detection of DNA binding activity. J Am Chem Soc (2011) 0.90
Enzyme-directed positioning of nanoparticles on large DNA templates. Bioconjug Chem (2007) 0.89
Simultaneous DNA binding, bending, and base flipping: evidence for a novel M.EcoRI methyltransferase-DNA complex. J Biol Chem (2004) 0.89
Long-range structural and dynamical changes induced by cofactor binding in DNA methyltransferase M.HhaI. Biochemistry (2007) 0.89
Conformational transitions as determinants of specificity for the DNA methyltransferase EcoRI. J Biol Chem (2006) 0.88
Bacteriophage T4 Dam DNA-(N6-adenine)-methyltransferase. Processivity and orientation to the methylation target. J Biol Chem (2002) 0.87
Mechanism of allosteric regulation of Dnmt1's processivity. Biochemistry (2005) 0.87
S-adenosyl-L-methionine-dependent methyl transfer: observable precatalytic intermediates during DNA cytosine methylation. Biochemistry (2007) 0.86
Functional analysis of BamHI DNA cytosine-N4 methyltransferase. J Mol Biol (2003) 0.85
AdoMet-dependent methyl-transfer: Glu119 is essential for DNA C5-cytosine methyltransferase M.HhaI. J Mol Biol (2007) 0.85
Modular plasmonic nanocarriers for efficient and targeted delivery of cancer-therapeutic siRNA. Nano Lett (2014) 0.84
Escherichia coli DNA adenine methyltransferase: intrasite processivity and substrate-induced dimerization and activation. Biochemistry (2009) 0.84
Enzymatic manipulation of DNA-nanomaterial constructs. J Am Chem Soc (2002) 0.84
Determinants of sequence-specific DNA methylation: target recognition and catalysis are coupled in M.HhaI. Biochemistry (2006) 0.84
Robust SERS enhancement factor statistics using rotational correlation spectroscopy. Nano Lett (2012) 0.84
Modulation of Escherichia coli DNA methyltransferase activity by biologically derived GATC-flanking sequences. J Biol Chem (2008) 0.83
Coupling sequence-specific recognition to DNA modification. J Biol Chem (2009) 0.83
Dimeric/oligomeric DNA methyltransferases: an unfinished story. Biol Chem (2009) 0.82
Determinants of precatalytic conformational transitions in the DNA cytosine methyltransferase M.HhaI. Biochemistry (2011) 0.82
Bacteriophage T4 Dam DNA-[N6-adenine]methyltransferase. Kinetic evidence for a catalytically essential conformational change in the ternary complex. J Biol Chem (2001) 0.82
Crystal structure of an RNA helix recognized by a zinc-finger protein: an 18-bp duplex at 1.6 A resolution. RNA (2002) 0.82
Differential methylation kinetics of individual target site strands by T4Dam DNA methyltransferase. Biol Chem (2007) 0.81
Molecular scale architecture: engineered three- and four-way junctions. Bioconjug Chem (2007) 0.81
STAT1:DNA sequence-dependent binding modulation by phosphorylation, protein:protein interactions and small-molecule inhibition. Nucleic Acids Res (2012) 0.81
DNA methyltransferases: mechanistic models derived from kinetic analysis. Crit Rev Biochem Mol Biol (2012) 0.80
Differential stabilization of reaction intermediates: specificity checkpoints for M.EcoRI revealed by transient fluorescence and fluorescence lifetime studies. Nucleic Acids Res (2008) 0.80
Symmetry elements in DNA structure important for recognition/methylation by DNA [amino]-methyltransferases. Nucleic Acids Res (2004) 0.79
DNA methylation modulates Salmonella enterica serovar Typhimurium virulence in Caenorhabditis elegans. FEMS Microbiol Lett (2005) 0.79
A potent cell-active allosteric inhibitor of murine DNA cytosine C5 methyltransferase. J Biol Chem (2002) 0.79
Distal structural elements coordinate a conserved base flipping network. Biochemistry (2013) 0.79
Bacteriophage T4Dam DNA-(adenine-N(6))-methyltransferase. Comparison of pre-steady state and single turnover methylation of 40-mer duplexes containing two (un)modified target sites. J Biol Chem (2004) 0.79
A new strategy for detection and development of tractable telomerase inhibitors. J Med Chem (2012) 0.79
Engineered extrahelical base destabilization enhances sequence discrimination of DNA methyltransferase M.HhaI. J Mol Biol (2006) 0.79
Study of bacteriophage T4-encoded Dam DNA (adenine-N6)-methyltransferase binding with substrates by rapid laser UV cross-linking. J Biol Chem (2007) 0.78
Targeted intracellular delivery of proteins with spatial and temporal control. Mol Pharm (2014) 0.78
Escherichia coli DNA adenine methyltransferase: the structural basis of processive catalysis and indirect read-out. J Biol Chem (2009) 0.78
Self-assembly of DNA arrays into multilayer stacks. Langmuir (2009) 0.77
Murine DNA cytosine C(5)-methyltransferase: in vitro studies of de novo methylation spreading. Biochem Biophys Res Commun (2003) 0.77
DNA (cytosine-N4-)- and -(adenine-N6-)-methyltransferases have different kinetic mechanisms but the same reaction route. A comparison of M.BamHI and T4 Dam. J Biol Chem (2003) 0.77
The recognition pathway for the DNA cytosine methyltransferase M.HhaI. Biochemistry (2009) 0.77
Molecular drivers of base flipping during sequence-specific DNA methylation. Chembiochem (2012) 0.76
Proximal recognition sites facilitate intrasite hopping by DNA adenine methyltransferase: mechanistic exploration of epigenetic gene regulation. J Biol Chem (2012) 0.76
Gold nanoparticle decoration of DNA on silicon. Langmuir (2005) 0.76
Enzyme-promoted base flipping controls DNA methylation fidelity. Biochemistry (2013) 0.76
Distinct facilitated diffusion mechanisms by E. coli Type II restriction endonucleases. Biochemistry (2014) 0.76
A probabilistic approach to compact steady-state kinetic equations for enzymic reactions. J Theor Biol (2006) 0.75