Published in Water Res on February 01, 2004
Bacteriophages of wastewater foaming-associated filamentous Gordonia reduce host levels in raw activated sludge. Sci Rep (2015) 1.24
Amyloid-like adhesins produced by floc-forming and filamentous bacteria in activated sludge. Appl Environ Microbiol (2008) 1.23
Taxonomic precision of different hypervariable regions of 16S rRNA gene and annotation methods for functional bacterial groups in biological wastewater treatment. PLoS One (2013) 1.04
Filamentous bacterium Eikelboom type 0092 in activated sludge plants in Australia is a member of the phylum Chloroflexi. Appl Environ Microbiol (2009) 0.86
Bacterial population dynamics in a laboratory activated sludge reactor monitored by pyrosequencing of 16S rRNA. Microbes Environ (2012) 0.85
Genomics of biological wastewater treatment. Microb Biotechnol (2008) 0.82
A modified oxic-settling-anaerobic activated sludge process using gravity thickening for excess sludge reduction. Sci Rep (2015) 0.81
Soil microbial functional and fungal diversity as influenced by municipal sewage sludge accumulation. Int J Environ Res Public Health (2014) 0.79
Variable cell morphology approach for individual-based modeling of microbial communities. Biophys J (2014) 0.79
Regional synchrony in full-scale activated sludge bioreactors due to deterministic microbial community assembly. ISME J (2016) 0.75
Bacterial community assembly in activated sludge: mapping beta diversity across environmental variables. Microbiologyopen (2016) 0.75
Census of cultivable bacterial community in common effluent treatment plant (CETP) of tannery discharge and computational scrutiny on their leading residents. Bioinformation (2013) 0.75
Population Dynamics of Bulking and Foaming Bacteria in a Full-scale Wastewater Treatment Plant over Five Years. Sci Rep (2016) 0.75
Prediction of Filamentous Sludge Bulking using a State-based Gaussian Processes Regression Model. Sci Rep (2016) 0.75
Impact of sludge deposition on biodiversity. Ecotoxicology (2015) 0.75
A Novel Separation Method of Microthrix parvicella Filaments from Activated Sludge by a Hydrophobic Plate. Curr Microbiol (2015) 0.75
Design Mechanism and Property of the Novel Fluorescent Probes for the Identification of Microthrix Parvicella In Situ. Materials (Basel) (2017) 0.75
Quantitative analysis of the microbial metabolome by isotope dilution mass spectrometry using uniformly 13C-labeled cell extracts as internal standards. Anal Biochem (2005) 2.33
Lost in transition: start-up of glycolysis yields subpopulations of nongrowing cells. Science (2014) 1.96
Correcting mass isotopomer distributions for naturally occurring isotopes. Biotechnol Bioeng (2002) 1.90
Quantitative evaluation of intracellular metabolite extraction techniques for yeast metabolomics. Anal Chem (2009) 1.72
Startup of reactors for anoxic ammonium oxidation: experiences from the first full-scale anammox reactor in Rotterdam. Water Res (2007) 1.55
Modeling the PAO-GAO competition: effects of carbon source, pH and temperature. Water Res (2008) 1.51
Enrichment of a mixed bacterial culture with a high polyhydroxyalkanoate storage capacity. Biomacromolecules (2009) 1.49
The membrane bioreactor: a novel tool to grow anammox bacteria as free cells. Biotechnol Bioeng (2008) 1.47
Nitrous oxide emission during wastewater treatment. Water Res (2009) 1.47
Metabolic-flux analysis of Saccharomyces cerevisiae CEN.PK113-7D based on mass isotopomer measurements of (13)C-labeled primary metabolites. FEMS Yeast Res (2005) 1.46
Mixed culture biotechnology for bioenergy production. Curr Opin Biotechnol (2007) 1.44
Effluent dissolved organic nitrogen and dissolved phosphorus removal by enhanced coagulation and microfiltration. Water Res (2010) 1.40
Microbial metabolomics: past, present and future methodologies. Biotechnol Lett (2006) 1.40
A framework for multidimensional modelling of activity and structure of multispecies biofilms. Environ Microbiol (2005) 1.37
Biofilm-control strategies based on enzymic disruption of the extracellular polymeric substance matrix--a modelling study. Microbiology (2005) 1.29
Dynamic simulation and metabolic re-design of a branched pathway using linlog kinetics. Metab Eng (2003) 1.29
Measuring enzyme activities under standardized in vivo-like conditions for systems biology. FEBS J (2010) 1.21
Development and application of a differential method for reliable metabolome analysis in Escherichia coli. Anal Biochem (2008) 1.20
Integrated multilaboratory systems biology reveals differences in protein metabolism between two reference yeast strains. Nat Commun (2010) 1.18
Cumulative bondomers: a new concept in flux analysis from 2D [13C,1H] COSY NMR data. Biotechnol Bioeng (2002) 1.15
A general description of detachment for multidimensional modelling of biofilms. Biotechnol Bioeng (2005) 1.14
Three-dimensional biofilm model with individual cells and continuum EPS matrix. Biotechnol Bioeng (2006) 1.12
Metabolic flux analysis of a glycerol-overproducing Saccharomyces cerevisiae strain based on GC-MS, LC-MS and NMR-derived C-labelling data. FEMS Yeast Res (2006) 1.11
Determination of the cytosolic free NAD/NADH ratio in Saccharomyces cerevisiae under steady-state and highly dynamic conditions. Biotechnol Bioeng (2008) 1.11
A computational model for biofilm-based microbial fuel cells. Water Res (2007) 1.10
Optimal re-design of primary metabolism in Escherichia coli using linlog kinetics. Metab Eng (2004) 1.09
Nitrification expanded: discovery, physiology and genomics of a nitrite-oxidizing bacterium from the phylum Chloroflexi. ISME J (2012) 1.08
Dynamics of nitric oxide and nitrous oxide emission during full-scale reject water treatment. Water Res (2007) 1.06
Quantitative analysis of metabolites in complex biological samples using ion-pair reversed-phase liquid chromatography-isotope dilution tandem mass spectrometry. J Chromatogr A (2008) 1.04
Revisiting the 13C-label distribution of the non-oxidative branch of the pentose phosphate pathway based upon kinetic and genetic evidence. FEBS J (2005) 1.03
Genome-derived minimal metabolic models for Escherichia coli MG1655 with estimated in vivo respiratory ATP stoichiometry. Biotechnol Bioeng (2010) 1.03
Effect of iclR and arcA knockouts on biomass formation and metabolic fluxes in Escherichia coli K12 and its implications on understanding the metabolism of Escherichia coli BL21 (DE3). BMC Microbiol (2011) 1.03
Mechanisms and specific directionality of autotrophic nitrous oxide and nitric oxide generation during transient anoxia. Environ Sci Technol (2010) 1.02
Model reduction and a priori kinetic parameter identifiability analysis using metabolome time series for metabolic reaction networks with linlog kinetics. Metab Eng (2008) 1.01
Rapid sampling for analysis of in vivo kinetics using the BioScope: a system for continuous-pulse experiments. Biotechnol Bioeng (2002) 1.01
Scale-down of penicillin production in Penicillium chrysogenum. Biotechnol J (2011) 1.01
Changes in the metabolome of Saccharomyces cerevisiae associated with evolution in aerobic glucose-limited chemostats. FEMS Yeast Res (2005) 0.99
A new framework for the estimation of control parameters in metabolic pathways using lin-log kinetics. Eur J Biochem (2004) 0.99
Reduced inorganic sulfur oxidation supports autotrophic and mixotrophic growth of Magnetospirillum strain J10 and Magnetospirillum gryphiswaldense. Environ Microbiol (2010) 0.98
Dynamics of intracellular metabolites of glycolysis and TCA cycle during cell-cycle-related oscillation in Saccharomyces cerevisiae. Biotechnol Bioeng (2005) 0.97
Polyhydroxybutyrate production from lactate using a mixed microbial culture. Biotechnol Bioeng (2011) 0.97
Sensitivity analysis of a biofilm model describing a one-stage completely autotrophic nitrogen removal (CANON) process. Biotechnol Bioeng (2002) 0.97
Metabolome, transcriptome and metabolic flux analysis of arabinose fermentation by engineered Saccharomyces cerevisiae. Metab Eng (2010) 0.97
13C-labeled gluconate tracing as a direct and accurate method for determining the pentose phosphate pathway split ratio in Penicillium chrysogenum. Appl Environ Microbiol (2006) 0.97
Cell flexibility affects the alignment of model myxobacteria. Biophys J (2010) 0.96
A comprehensive method for the quantification of the non-oxidative pentose phosphate pathway intermediates in Saccharomyces cerevisiae by GC-IDMS. J Chromatogr B Analyt Technol Biomed Life Sci (2009) 0.96
Xylose anaerobic conversion by open-mixed cultures. Appl Microbiol Biotechnol (2008) 0.94
Effect of different salt adaptation strategies on the microbial diversity, activity, and settling of nitrifying sludge in sequencing batch reactors. Appl Microbiol Biotechnol (2011) 0.94
Dynamics of glycolytic regulation during adaptation of Saccharomyces cerevisiae to fermentative metabolism. Appl Environ Microbiol (2008) 0.94
Simultaneous quantification of free nucleotides in complex biological samples using ion pair reversed phase liquid chromatography isotope dilution tandem mass spectrometry. Anal Biochem (2009) 0.94
Intracellular metabolite determination in the presence of extracellular abundance: Application to the penicillin biosynthesis pathway in Penicillium chrysogenum. Biotechnol Bioeng (2010) 0.94
In vivo kinetics of primary metabolism in Saccharomyces cerevisiae studied through prolonged chemostat cultivation. Metab Eng (2005) 0.93
The mathematics of metabolic control analysis revisited. Metab Eng (2002) 0.93
An in vivo data-driven framework for classification and quantification of enzyme kinetics and determination of apparent thermodynamic data. Metab Eng (2011) 0.93
Optimization of cold methanol quenching for quantitative metabolomics of Penicillium chrysogenum. Metabolomics (2011) 0.92
A method for estimation of elasticities in metabolic networks using steady state and dynamic metabolomics data and linlog kinetics. BMC Bioinformatics (2006) 0.92
Model based evaluation of the effect of pH and electrode geometry on microbial fuel cell performance. Bioelectrochemistry (2009) 0.92
Analysis of in vivo kinetics of glycolysis in aerobic Saccharomyces cerevisiae by application of glucose and ethanol pulses. Biotechnol Bioeng (2004) 0.92
Unravelling the reasons for disproportion in the ratio of AOB and NOB in aerobic granular sludge. Appl Microbiol Biotechnol (2012) 0.92
Metabolic flux and metabolic network analysis of Penicillium chrysogenum using 2D [13C, 1H] COSY NMR measurements and cumulative bondomer simulation. Biotechnol Bioeng (2003) 0.91
Development of quantitative metabolomics for Pichia pastoris. Metabolomics (2011) 0.91
Segregation of biomass in cyclic anaerobic/aerobic granular sludge allows the enrichment of anaerobic ammonium oxidizing bacteria at low temperatures. Environ Sci Technol (2011) 0.91
Use of genetically engineered microorganisms (GEMs) for the bioremediation of contaminants. Crit Rev Biotechnol (2006) 0.91
In vivo kinetics with rapid perturbation experiments in Saccharomyces cerevisiae using a second-generation BioScope. Metab Eng (2006) 0.91
N2O emissions from activated sludge processes, 2008-2009: results of a national monitoring survey in the United States. Environ Sci Technol (2010) 0.91
Glycerol fermentation by (open) mixed cultures: a chemostat study. Biotechnol Bioeng (2008) 0.91
Looking beyond struvite for P-recovery. Environ Sci Technol (2013) 0.90
Factors affecting the microbial populations at full-scale enhanced biological phosphorus removal (EBPR) wastewater treatment plants in The Netherlands. Water Res (2008) 0.89
Diversity of microbial communities in open mixed culture fermentations: impact of the pH and carbon source. Appl Microbiol Biotechnol (2008) 0.89
Aerobic sludge granulation: a tale of two polysaccharides? Water Res (2012) 0.89
Microbial community of sulfate-reducing up-flow sludge bed in the SANI® process for saline sewage treatment. Appl Microbiol Biotechnol (2011) 0.89
Dynamic 13C-tracer study of storage carbohydrate pools in aerobic glucose-limited Saccharomyces cerevisiae confirms a rapid steady-state turnover and fast mobilization during a modest stepup in the glucose uptake rate. FEMS Yeast Res (2009) 0.89
Reduced iron induced nitric oxide and nitrous oxide emission. Water Res (2011) 0.88
Fatty acids production from hydrogen and carbon dioxide by mixed culture in the membrane biofilm reactor. Water Res (2013) 0.88
Glucose-methanol co-utilization in Pichia pastoris studied by metabolomics and instationary ¹³C flux analysis. BMC Syst Biol (2013) 0.88
Microbial diversity of an oil-water processing site and its associated oil field: the possible role of microorganisms as information carriers from oil-associated environments. FEMS Microbiol Ecol (2009) 0.88
Microbial community structure in autotrophic nitrifying granules characterized by experimental and simulation analyses. Environ Microbiol (2009) 0.88
Effect of feeding pattern and storage on the sludge settleability under aerobic conditions. Water Res (2003) 0.88
Response of anaerobic ammonium-oxidizing bacteria to hydroxylamine. Appl Environ Microbiol (2008) 0.88
Model-based evaluation of temperature and inflow variations on a partial nitrification-ANAMMOX biofilm process. Water Res (2002) 0.87
Nitrous oxide production by lithotrophic ammonia-oxidizing bacteria and implications for engineered nitrogen-removal systems. Biochem Soc Trans (2011) 0.87
Metabolic model for glycogen-accumulating organisms in anaerobic/aerobic activated sludge systems. Biotechnol Bioeng (2003) 0.87
A novel sulfate reduction, autotrophic denitrification, nitrification integrated (SANI) process for saline wastewater treatment. Water Res (2009) 0.87
Modeling product formation in anaerobic mixed culture fermentations. Biotechnol Bioeng (2006) 0.87
Characterization of geochemical constituents and bacterial populations associated with As mobilization in deep and shallow tube wells in Bangladesh. Water Res (2009) 0.86
Metabolic modeling of denitrification in Agrobacterium tumefaciens: a tool to study inhibiting and activating compounds for the denitrification pathway. Front Microbiol (2012) 0.86
Kinetic modeling of phototrophic biofilms: the PHOBIA model. Biotechnol Bioeng (2007) 0.86
Quantitative metabolomics analysis of amino acid metabolism in recombinant Pichia pastoris under different oxygen availability conditions. Microb Cell Fact (2012) 0.86
Determination of elasticities, concentration and flux control coefficients from transient metabolite data using linlog kinetics. Metab Eng (2005) 0.86
Short-term metabolome dynamics and carbon, electron, and ATP balances in chemostat-grown Saccharomyces cerevisiae CEN.PK 113-7D following a glucose pulse. Appl Environ Microbiol (2006) 0.86
Anammox growth on pretreated municipal wastewater. Environ Sci Technol (2014) 0.86
Dynamic gene expression regulation model for growth and penicillin production in Penicillium chrysogenum. Biotechnol Bioeng (2010) 0.86
Methane emission during municipal wastewater treatment. Water Res (2012) 0.86
Microbial sulfide oxidation in the oxic-anoxic transition zone of freshwater sediment: involvement of lithoautotrophic Magnetospirillum strain J10. FEMS Microbiol Ecol (2009) 0.86
Influence of ammonium on the accumulation of polyhydroxybutyrate (PHB) in aerobic open mixed cultures. J Biotechnol (2010) 0.85
Short-term adhesion and long-term biofouling testing of polydopamine and poly(ethylene glycol) surface modifications of membranes and feed spacers for biofouling control. Water Res (2012) 0.85
Influence of the C/N ratio on the performance of polyhydroxybutyrate (PHB) producing sequencing batch reactors at short SRTs. Water Res (2009) 0.85
Identification of key factors in Accelerated Low Water Corrosion through experimental simulation of tidal conditions: influence of stimulated indigenous microbiota. Biofouling (2014) 0.85