Willem M de Vos

Author PubWeight™ 372.89‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 Enterotypes of the human gut microbiome. Nature 2011 24.36
2 Duodenal infusion of donor feces for recurrent Clostridium difficile. N Engl J Med 2013 20.65
3 Complete genome sequence of Lactobacillus plantarum WCFS1. Proc Natl Acad Sci U S A 2003 8.40
4 Richness of human gut microbiome correlates with metabolic markers. Nature 2013 6.93
5 Mucosa-associated bacteria in the human gastrointestinal tract are uniformly distributed along the colon and differ from the community recovered from feces. Appl Environ Microbiol 2002 6.74
6 Transfer of intestinal microbiota from lean donors increases insulin sensitivity in individuals with metabolic syndrome. Gastroenterology 2012 6.04
7 Cross-talk between Akkermansia muciniphila and intestinal epithelium controls diet-induced obesity. Proc Natl Acad Sci U S A 2013 5.88
8 Comparative analysis of pyrosequencing and a phylogenetic microarray for exploring microbial community structures in the human distal intestine. PLoS One 2009 4.93
9 CRISPR immunity relies on the consecutive binding and degradation of negatively supercoiled invader DNA by Cascade and Cas3. Mol Cell 2012 4.84
10 Comparative genomic analysis of Lactobacillus rhamnosus GG reveals pili containing a human- mucus binding protein. Proc Natl Acad Sci U S A 2009 4.61
11 Akkermansia muciniphila gen. nov., sp. nov., a human intestinal mucin-degrading bacterium. Int J Syst Evol Microbiol 2004 4.05
12 Comparative analysis of fecal DNA extraction methods with phylogenetic microarray: effective recovery of bacterial and archaeal DNA using mechanical cell lysis. J Microbiol Methods 2010 3.58
13 Development and application of the human intestinal tract chip, a phylogenetic microarray: analysis of universally conserved phylotypes in the abundant microbiota of young and elderly adults. Environ Microbiol 2009 3.57
14 Molecular diversity of Lactobacillus spp. and other lactic acid bacteria in the human intestine as determined by specific amplification of 16S ribosomal DNA. Appl Environ Microbiol 2002 3.43
15 Insight into the prebiotic concept: lessons from an exploratory, double blind intervention study with inulin-type fructans in obese women. Gut 2012 3.09
16 Diversity of the human gastrointestinal tract microbiota revisited. Environ Microbiol 2007 3.00
17 Colonic microbiota signatures across five northern European countries. Appl Environ Microbiol 2005 2.98
18 Global and deep molecular analysis of microbiota signatures in fecal samples from patients with irritable bowel syndrome. Gastroenterology 2011 2.79
19 A microbial world within us. Mol Microbiol 2006 2.76
20 S layer protein A of Lactobacillus acidophilus NCFM regulates immature dendritic cell and T cell functions. Proc Natl Acad Sci U S A 2008 2.65
21 Anaerobic microbial dehalogenation. Annu Rev Microbiol 2004 2.51
22 Metagenomic species profiling using universal phylogenetic marker genes. Nat Methods 2013 2.51
23 Responses of gut microbiota and glucose and lipid metabolism to prebiotics in genetic obese and diet-induced leptin-resistant mice. Diabetes 2011 2.46
24 Differential NF-kappaB pathways induction by Lactobacillus plantarum in the duodenum of healthy humans correlating with immune tolerance. Proc Natl Acad Sci U S A 2009 2.29
25 Functional genome analysis of Bifidobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential and conserved host-colonization factor. Proc Natl Acad Sci U S A 2011 2.22
26 Analysis of growth of Lactobacillus plantarum WCFS1 on a complex medium using a genome-scale metabolic model. J Biol Chem 2006 2.17
27 The Lrp family of transcriptional regulators. Mol Microbiol 2003 2.15
28 The Mucin degrader Akkermansia muciniphila is an abundant resident of the human intestinal tract. Appl Environ Microbiol 2007 2.09
29 Identification of Lactobacillus plantarum genes that are induced in the gastrointestinal tract of mice. J Bacteriol 2004 2.06
30 Exploring Lactobacillus plantarum genome diversity by using microarrays. J Bacteriol 2005 2.02
31 The micro-Petri dish, a million-well growth chip for the culture and high-throughput screening of microorganisms. Proc Natl Acad Sci U S A 2007 1.94
32 The genome of Akkermansia muciniphila, a dedicated intestinal mucin degrader, and its use in exploring intestinal metagenomes. PLoS One 2011 1.90
33 Probiotic and other functional microbes: from markets to mechanisms. Curr Opin Biotechnol 2005 1.89
34 Intestinal microbiota in healthy adults: temporal analysis reveals individual and common core and relation to intestinal symptoms. PLoS One 2011 1.88
35 Hydrogenomics of the extremely thermophilic bacterium Caldicellulosiruptor saccharolyticus. Appl Environ Microbiol 2008 1.85
36 Biodiversity-based identification and functional characterization of the mannose-specific adhesin of Lactobacillus plantarum. J Bacteriol 2005 1.85
37 Quantification of uncultured Ruminococcus obeum-like bacteria in human fecal samples by fluorescent in situ hybridization and flow cytometry using 16S rRNA-targeted probes. Appl Environ Microbiol 2002 1.82
38 The human small intestinal microbiota is driven by rapid uptake and conversion of simple carbohydrates. ISME J 2012 1.81
39 Microbes inside--from diversity to function: the case of Akkermansia. ISME J 2012 1.80
40 Development of bacterial and bifidobacterial communities in feces of newborn babies. Anaerobe 2003 1.78
41 Therapeutic potential of fecal microbiota transplantation. Gastroenterology 2013 1.78
42 Microarray analysis and barcoded pyrosequencing provide consistent microbial profiles depending on the source of human intestinal samples. Appl Environ Microbiol 2011 1.76
43 Isolation of RNA from bacterial samples of the human gastrointestinal tract. Nat Protoc 2006 1.75
44 Genetic diversity of viable, injured, and dead fecal bacteria assessed by fluorescence-activated cell sorting and 16S rRNA gene analysis. Appl Environ Microbiol 2005 1.74
45 Intestinal integrity and Akkermansia muciniphila, a mucin-degrading member of the intestinal microbiota present in infants, adults, and the elderly. Appl Environ Microbiol 2007 1.73
46 Mucosal adhesion properties of the probiotic Lactobacillus rhamnosus GG SpaCBA and SpaFED pilin subunits. Appl Environ Microbiol 2010 1.71
47 Modulation of Mucosal Immune Response, Tolerance, and Proliferation in Mice Colonized by the Mucin-Degrader Akkermansia muciniphila. Front Microbiol 2011 1.69
48 Complete sequences of four plasmids of Lactococcus lactis subsp. cremoris SK11 reveal extensive adaptation to the dairy environment. Appl Environ Microbiol 2005 1.69
49 Mucin-bacterial interactions in the human oral cavity and digestive tract. Gut Microbes 2010 1.65
50 Intestinal microbiota in human health and disease: the impact of probiotics. Genes Nutr 2011 1.63
51 Phylogenetic analysis of dysbiosis in ulcerative colitis during remission. Inflamm Bowel Dis 2013 1.63
52 An agr-like two-component regulatory system in Lactobacillus plantarum is involved in production of a novel cyclic peptide and regulation of adherence. J Bacteriol 2005 1.61
53 Cell to cell communication by autoinducing peptides in gram-positive bacteria. Antonie Van Leeuwenhoek 2002 1.61
54 Comparative genomics of Lactobacillus. Microb Biotechnol 2010 1.60
55 The intestinal LABs. Antonie Van Leeuwenhoek 2002 1.60
56 The function of our microbiota: who is out there and what do they do? Front Cell Infect Microbiol 2012 1.54
57 Gastrointestinal microbiota in irritable bowel syndrome: present state and perspectives. Microbiology 2010 1.50
58 Identification of prebiotic fructooligosaccharide metabolism in Lactobacillus plantarum WCFS1 through microarrays. Appl Environ Microbiol 2007 1.48
59 Diversity, dynamics, and activity of bacterial communities during production of an artisanal Sicilian cheese as evaluated by 16S rRNA analysis. Appl Environ Microbiol 2002 1.48
60 Altered gut microbiota and endocannabinoid system tone in obese and diabetic leptin-resistant mice: impact on apelin regulation in adipose tissue. Front Microbiol 2011 1.46
61 Isolation of DNA from bacterial samples of the human gastrointestinal tract. Nat Protoc 2006 1.43
62 Linking phylogenetic identities of bacteria to starch fermentation in an in vitro model of the large intestine by RNA-based stable isotope probing. Environ Microbiol 2008 1.40
63 Characterization of the SpaCBA pilus fibers in the probiotic Lactobacillus rhamnosus GG. Appl Environ Microbiol 2012 1.39
64 Increased production of folate by metabolic engineering of Lactococcus lactis. Appl Environ Microbiol 2003 1.37
65 Metaproteomics approach to study the functionality of the microbiota in the human infant gastrointestinal tract. Appl Environ Microbiol 2006 1.36
66 Description of Sulfurospirillum halorespirans sp. nov., an anaerobic, tetrachloroethene-respiring bacterium, and transfer of Dehalospirillum multivorans to the genus Sulfurospirillum as Sulfurospirillum multivorans comb. nov. Int J Syst Evol Microbiol 2003 1.36
67 Genetic characterization of the bile salt response in Lactobacillus plantarum and analysis of responsive promoters in vitro and in situ in the gastrointestinal tract. J Bacteriol 2004 1.36
68 Mixed-species genomic microarray analysis of fecal samples reveals differential transcriptional responses of bifidobacteria in breast- and formula-fed infants. Appl Environ Microbiol 2009 1.35
69 The first 1000 cultured species of the human gastrointestinal microbiota. FEMS Microbiol Rev 2014 1.34
70 Microbiota conservation and BMI signatures in adult monozygotic twins. ISME J 2012 1.34
71 Convergence in probiotic Lactobacillus gut-adaptive responses in humans and mice. ISME J 2010 1.33
72 Spatial and temporal expression of Lactobacillus plantarum genes in the gastrointestinal tracts of mice. Appl Environ Microbiol 2006 1.31
73 The complete genomes of Lactobacillus plantarum and Lactobacillus johnsonii reveal extensive differences in chromosome organization and gene content. Microbiology 2004 1.31
74 Characterization of germination receptors of Bacillus cereus ATCC 14579. Appl Environ Microbiol 2006 1.31
75 Human intestinal microbiota composition is associated with local and systemic inflammation in obesity. Obesity (Silver Spring) 2013 1.31
76 Identification and functional verification of archaeal-type phosphoenolpyruvate carboxylase, a missing link in archaeal central carbohydrate metabolism. J Bacteriol 2004 1.30
77 The Sulfolobus solfataricus Lrp-like protein LysM regulates lysine biosynthesis in response to lysine availability. J Biol Chem 2002 1.30
78 Comparative metaproteomics and diversity analysis of human intestinal microbiota testifies for its temporal stability and expression of core functions. PLoS One 2012 1.28
79 The prophage sequences of Lactobacillus plantarum strain WCFS1. Virology 2003 1.28
80 Victivallis vadensis gen. nov., sp. nov., a sugar-fermenting anaerobe from human faeces. Int J Syst Evol Microbiol 2003 1.27
81 The novel porcine Lactobacillus sobrius strain protects intestinal cells from enterotoxigenic Escherichia coli K88 infection and prevents membrane barrier damage. J Nutr 2007 1.26
82 Long-term monitoring of the human intestinal microbiota composition. Environ Microbiol 2012 1.26
83 Diversity, vitality and activities of intestinal lactic acid bacteria and bifidobacteria assessed by molecular approaches. FEMS Microbiol Rev 2005 1.26
84 An iterative workflow for mining the human intestinal metaproteome. BMC Genomics 2011 1.25
85 Specific response of a novel and abundant Lactobacillus amylovorus-like phylotype to dietary prebiotics in the guts of weaning piglets. Appl Environ Microbiol 2004 1.24
86 The complete coenzyme B12 biosynthesis gene cluster of Lactobacillus reuteri CRL1098. Microbiology 2008 1.22
87 Beyond diversity: functional microbiomics of the human colon. Trends Microbiol 2006 1.22
88 TRASH: a novel metal-binding domain predicted to be involved in heavy-metal sensing, trafficking and resistance. Trends Biochem Sci 2003 1.21
89 Comparative genomic and functional analysis of 100 Lactobacillus rhamnosus strains and their comparison with strain GG. PLoS Genet 2013 1.21
90 Engineering a selectable marker for hyperthermophiles. J Biol Chem 2005 1.20
91 The heat-shock response of Listeria monocytogenes comprises genes involved in heat shock, cell division, cell wall synthesis, and the SOS response. Microbiology 2007 1.19
92 Differential modulation by Akkermansia muciniphila and Faecalibacterium prausnitzii of host peripheral lipid metabolism and histone acetylation in mouse gut organoids. MBio 2014 1.18
93 The alternative sigma factor sigmaB of Bacillus cereus: response to stress and role in heat adaptation. J Bacteriol 2004 1.18
94 Comparative genomic and functional analysis of Lactobacillus casei and Lactobacillus rhamnosus strains marketed as probiotics. Appl Environ Microbiol 2013 1.18
95 Metatranscriptome analysis of the human fecal microbiota reveals subject-specific expression profiles, with genes encoding proteins involved in carbohydrate metabolism being dominantly expressed. Appl Environ Microbiol 2010 1.18
96 Thioredoxin reductase is a key factor in the oxidative stress response of Lactobacillus plantarum WCFS1. Microb Cell Fact 2007 1.17
97 Molecular approaches for the detection and identification of bifidobacteria and lactobacilli in the human gastrointestinal tract. Syst Appl Microbiol 2003 1.17
98 gerR, a novel ger operon involved in L-alanine- and inosine-initiated germination of Bacillus cereus ATCC 14579. Appl Environ Microbiol 2005 1.17
99 Growth and sporulation of Bacillus cereus ATCC 14579 under defined conditions: temporal expression of genes for key sigma factors. Appl Environ Microbiol 2004 1.14
100 Post-natal development of the porcine microbiota composition and activities. Environ Microbiol 2006 1.14
101 Genetic and biochemical characterization of the cell wall hydrolase activity of the major secreted protein of Lactobacillus rhamnosus GG. PLoS One 2012 1.14
102 Differential transcriptional response of Bifidobacterium longum to human milk, formula milk, and galactooligosaccharide. Appl Environ Microbiol 2008 1.13
103 Aberrant gut microbiota composition at the onset of type 1 diabetes in young children. Diabetologia 2014 1.12
104 Identification of the transcriptional response of human intestinal mucosa to Lactobacillus plantarum WCFS1 in vivo. BMC Genomics 2008 1.12
105 Adhesion and nanomechanics of pili from the probiotic Lactobacillus rhamnosus GG. ACS Nano 2013 1.12
106 Characterization, expression, and mutation of the Lactococcus lactis galPMKTE genes, involved in galactose utilization via the Leloir pathway. J Bacteriol 2003 1.11
107 Identification of the missing links in prokaryotic pentose oxidation pathways: evidence for enzyme recruitment. J Biol Chem 2006 1.11
108 Intestinal microbiota of infants with colic: development and specific signatures. Pediatrics 2013 1.11
109 Microarray analysis reveals marked intestinal microbiota aberrancy in infants having eczema compared to healthy children in at-risk for atopic disease. BMC Microbiol 2013 1.10
110 Biochemical adaptations of two sugar kinases from the hyperthermophilic archaeon Pyrococcus furiosus. Biochem J 2002 1.10
111 Genome-scale model of Streptococcus thermophilus LMG18311 for metabolic comparison of lactic acid bacteria. Appl Environ Microbiol 2009 1.10
112 Semi-automated extraction of microbial DNA from feces for qPCR and phylogenetic microarray analysis. J Microbiol Methods 2010 1.10
113 Duodenal microbiota composition and mucosal homeostasis in pediatric celiac disease. BMC Gastroenterol 2013 1.09
114 Crystal structure of fervidolysin from Fervidobacterium pennivorans, a keratinolytic enzyme related to subtilisin. J Mol Biol 2004 1.07
115 Interactomics in the human intestine: Lactobacilli and Bifidobacteria make a difference. J Clin Gastroenterol 2008 1.07
116 Microbial communities in the human small intestine: coupling diversity to metagenomics. Future Microbiol 2007 1.07
117 Functional genomics of lactic acid bacteria: from food to health. Microb Cell Fact 2014 1.06
118 Functional characterization of a mucus-specific LPXTG surface adhesin from probiotic Lactobacillus rhamnosus GG. Appl Environ Microbiol 2011 1.06
119 Characterization of CprK1, a CRP/FNR-type transcriptional regulator of halorespiration from Desulfitobacterium hafniense. J Bacteriol 2006 1.06
120 The major secreted protein Msp1/p75 is O-glycosylated in Lactobacillus rhamnosus GG. Microb Cell Fact 2012 1.06
121 Heme and menaquinone induced electron transport in lactic acid bacteria. Microb Cell Fact 2009 1.06
122 Feeding of Lactobacillus sobrius reduces Escherichia coli F4 levels in the gut and promotes growth of infected piglets. FEMS Microbiol Ecol 2008 1.05
123 Proteomic analysis of log to stationary growth phase Lactobacillus plantarum cells and a 2-DE database. Proteomics 2006 1.05
124 Intestinal microbiota in healthy U.S. young children and adults--a high throughput microarray analysis. PLoS One 2013 1.04
125 Impact of diet on human intestinal microbiota and health. Annu Rev Food Sci Technol 2014 1.04
126 Exploiting the ecogenomics toolbox for environmental diagnostics of organohalide-respiring bacteria. Trends Biotechnol 2010 1.03
127 Mixed-culture transcriptome analysis reveals the molecular basis of mixed-culture growth in Streptococcus thermophilus and Lactobacillus bulgaricus. Appl Environ Microbiol 2010 1.03
128 Insertion-sequence-mediated mutations isolated during adaptation to growth and starvation in Lactococcus lactis. Genetics 2004 1.03
129 Proteomics and transcriptomics characterization of bile stress response in probiotic Lactobacillus rhamnosus GG. Mol Cell Proteomics 2010 1.02
130 Genomics: A gut prediction. Nature 2013 1.01
131 Characterization of the role of para-aminobenzoic acid biosynthesis in folate production by Lactococcus lactis. Appl Environ Microbiol 2007 1.01
132 The little bacteria that can - diversity, genomics and ecophysiology of 'Dehalococcoides' spp. in contaminated environments. Microb Biotechnol 2009 1.01
133 The first true obligately syntrophic propionate-oxidizing bacterium, Pelotomaculum schinkii sp. nov., co-cultured with Methanospirillum hungatei, and emended description of the genus Pelotomaculum. Int J Syst Evol Microbiol 2005 1.01
134 Functional analysis of four bile salt hydrolase and penicillin acylase family members in Lactobacillus plantarum WCFS1. Appl Environ Microbiol 2008 1.00
135 Identification of the sigmaB regulon of Bacillus cereus and conservation of sigmaB-regulated genes in low-GC-content gram-positive bacteria. J Bacteriol 2007 1.00
136 Analysis of the role of RsbV, RsbW, and RsbY in regulating {sigma}B activity in Bacillus cereus. J Bacteriol 2005 1.00
137 Molecular and biochemical characterization of the thermoactive family 1 pectate lyase from the hyperthermophilic bacterium Thermotoga maritima. Biochem J 2003 1.00
138 Molecularly assessed shifts of Bifidobacterium ssp. and less diverse microbial communities are characteristic of 5-year-old allergic children. FEMS Immunol Med Microbiol 2007 1.00
139 Functional analysis of three plasmids from Lactobacillus plantarum. Appl Environ Microbiol 2005 0.99
140 Health benefits and health claims of probiotics: bridging science and marketing. Br J Nutr 2011 0.99
141 Characterization of plasmid pRT1 from Pyrococcus sp. strain JT1. J Bacteriol 2002 0.99
142 Glycobiome: bacteria and mucus at the epithelial interface. Best Pract Res Clin Gastroenterol 2013 0.99
143 Lactobacillus sobrius sp. nov., abundant in the intestine of weaning piglets. Int J Syst Evol Microbiol 2006 0.98
144 Molecular analysis of the role of two aromatic aminotransferases and a broad-specificity aspartate aminotransferase in the aromatic amino acid metabolism of Pyrococcus furiosus. Archaea 2002 0.98
145 Genome-based in silico detection of putative manganese transport systems in Lactobacillus plantarum and their genetic analysis. Microbiology 2005 0.97
146 Effect of soil sample preservation, compared to the effect of other environmental variables, on bacterial and eukaryotic diversity. Res Microbiol 2008 0.97
147 Assessment of CcpA-mediated catabolite control of gene expression in Bacillus cereus ATCC 14579. BMC Microbiol 2008 0.97
148 Where bio meets nano: the many uses for nanoporous aluminum oxide in biotechnology. Biotechnol Adv 2011 0.97
149 Making sense of quorum sensing in lactobacilli: a special focus on Lactobacillus plantarum WCFS1. Microbiology 2007 0.97
150 Effect of diet on the intestinal microbiota and its activity. Curr Opin Gastroenterol 2014 0.96
151 Metagenome analysis reveals yet unexplored reductive dechlorinating potential of Dehalobacter sp. E1 growing in co-culture with Sedimentibacter sp. Environ Microbiol Rep 2012 0.96
152 Improvement of Lactobacillus plantarum aerobic growth as directed by comprehensive transcriptome analysis. Appl Environ Microbiol 2008 0.96
153 Influence of sporulation medium composition on transcription of ger operons and the germination response of spores of Bacillus cereus ATCC 14579. Appl Environ Microbiol 2006 0.95
154 The intestinal microbiota and host immune interactions in the critically ill. Trends Microbiol 2013 0.95
155 Molecular characterization of a conserved archaeal copper resistance (cop) gene cluster and its copper-responsive regulator in Sulfolobus solfataricus P2. Microbiology 2006 0.95
156 The SOS response of Listeria monocytogenes is involved in stress resistance and mutagenesis. Microbiology 2009 0.95
157 Identification of a glycolytic regulon in the archaea Pyrococcus and Thermococcus. FEMS Microbiol Lett 2006 0.94
158 Identification of glucose-fermenting bacteria present in an in vitro model of the human intestine by RNA-stable isotope probing. FEMS Microbiol Ecol 2007 0.94
159 Engineering of carbon distribution between glycolysis and sugar nucleotide biosynthesis in Lactococcus lactis. Appl Environ Microbiol 2003 0.94
160 Profiling human gut bacterial metabolism and its kinetics using [U-13C]glucose and NMR. NMR Biomed 2010 0.94
161 Comparative genome analysis of Lactobacillus casei strains isolated from Actimel and Yakult products reveals marked similarities and points to a common origin. Microb Biotechnol 2013 0.94
162 Eukaryotic diversity in historical soil samples. FEMS Microbiol Ecol 2006 0.94
163 Genome sequence of Chthoniobacter flavus Ellin428, an aerobic heterotrophic soil bacterium. J Bacteriol 2011 0.93
164 Role of phosphate in the central metabolism of two lactic acid bacteria--a comparative systems biology approach. FEBS J 2012 0.93
165 Evaluating the microbial diversity of an in vitro model of the human large intestine by phylogenetic microarray analysis. Microbiology 2010 0.93
166 Bifidobacterium population analysis in the infant gut by direct mapping of genomic hybridization patterns: potential for monitoring temporal development and effects of dietary regimens. Microb Biotechnol 2010 0.93
167 Using recombinant Lactococci as an approach to dissect the immunomodulating capacity of surface piliation in probiotic Lactobacillus rhamnosus GG. PLoS One 2013 0.93
168 Effect of amino acid availability on vitamin B12 production in Lactobacillus reuteri. Appl Environ Microbiol 2009 0.92
169 High-Level folate production in fermented foods by the B12 producer Lactobacillus reuteri JCM1112. Appl Environ Microbiol 2008 0.92
170 A Bifidobacterium mixed-species microarray for high resolution discrimination between intestinal bifidobacteria. J Microbiol Methods 2008 0.92
171 Transformation of folate-consuming Lactobacillus gasseri into a folate producer. Appl Environ Microbiol 2004 0.92
172 Identification of sigmaB-dependent genes in Bacillus cereus by proteome and in vitro transcription analysis. J Bacteriol 2004 0.91
173 Evaluation of microbial community reproducibility, stability and composition in a human distal gut chemostat model. J Microbiol Methods 2013 0.91
174 Systems biology of the gut: the interplay of food, microbiota and host at the mucosal interface. Curr Opin Biotechnol 2010 0.91
175 Translating the human microbiome. Nat Biotechnol 2013 0.90
176 Intake of whole-grain and fiber-rich rye bread versus refined wheat bread does not differentiate intestinal microbiota composition in Finnish adults with metabolic syndrome. J Nutr 2013 0.90
177 Advanced molecular tools for the identification of lactic acid bacteria. J Nutr 2007 0.90
178 Bacterial gene expression detected in human faeces by reverse transcription-PCR. J Microbiol Methods 2003 0.90
179 Contribution of the intestinal microbiota to human health: from birth to 100 years of age. Curr Top Microbiol Immunol 2013 0.90
180 Genome sequence of Lactobacillus amylovorus GRL1112. J Bacteriol 2010 0.90
181 Genome-scale metabolic model for Lactococcus lactis MG1363 and its application to the analysis of flavor formation. Appl Microbiol Biotechnol 2013 0.89
182 Molecular and biochemical characterization of a distinct type of fructose-1,6-bisphosphatase from Pyrococcus furiosus. J Bacteriol 2002 0.89
183 Pseudovitamin B(12) is the corrinoid produced by Lactobacillus reuteri CRL1098 under anaerobic conditions. FEBS Lett 2007 0.89
184 Identification of a novel alpha-galactosidase from the hyperthermophilic archaeon Sulfolobus solfataricus. J Bacteriol 2006 0.89
185 Human intestinal metagenomics: state of the art and future. Curr Opin Microbiol 2013 0.88
186 Sugar utilisation and conservation of the gal-lac gene cluster in Streptococcus thermophilus. Syst Appl Microbiol 2004 0.88
187 Physiological responses to folate overproduction in Lactobacillus plantarum WCFS1. Microb Cell Fact 2010 0.87
188 Correlation of Dehalococcoides 16S rRNA and chloroethene-reductive dehalogenase genes with geochemical conditions in chloroethene-contaminated groundwater. Appl Environ Microbiol 2009 0.87
189 Effect of high contents of dietary animal-derived protein or carbohydrates on canine faecal microbiota. BMC Vet Res 2012 0.87
190 Representational difference analysis and real-time PCR for strain-specific quantification of Lactobacillus sobrius sp. nov. Appl Environ Microbiol 2005 0.87
191 Community analysis of a full-scale anaerobic bioreactor treating paper mill wastewater. Syst Appl Microbiol 2005 0.87
192 Molecular characterization of H2O2-forming NADH oxidases from Archaeoglobus fulgidus. Eur J Biochem 2003 0.87
193 Autoregulation of subtilin biosynthesis in Bacillus subtilis: the role of the spa-box in subtilin-responsive promoters. Peptides 2004 0.87
194 Effect of acid stress on protein expression and phosphorylation in Lactobacillus rhamnosus GG. J Proteomics 2011 0.86
195 Functional identification in Lactobacillus reuteri of a PocR-like transcription factor regulating glycerol utilization and vitamin B12 synthesis. Microb Cell Fact 2011 0.86
196 Unity in organisation and regulation of catabolic operons in Lactobacillus plantarum, Lactococcus lactis and Listeria monocytogenes. Syst Appl Microbiol 2005 0.86
197 Expression of Aspergillus hemoglobin domain activities in Aspergillus oryzae grown on solid substrates improves growth rate and enzyme production. Biotechnol J 2006 0.86
198 Tracking functional guilds: "Dehalococcoides" spp. in European river basins contaminated with hexachlorobenzene. Appl Environ Microbiol 2009 0.86
199 Functional ingredient production: application of global metabolic models. Curr Opin Biotechnol 2005 0.86
200 Comparative genome analysis of central nitrogen metabolism and its control by GlnR in the class Bacilli. BMC Genomics 2012 0.86
201 Divergent roles of CprK paralogues from Desulfitobacterium hafniense in activating gene expression. Microbiology 2008 0.86
202 Deletion of the sigB gene in Bacillus cereus ATCC 14579 leads to hydrogen peroxide hyperresistance. Appl Environ Microbiol 2005 0.86
203 Comparative and functional analysis of the rRNA-operons and their tRNA gene complement in different lactic acid bacteria. Syst Appl Microbiol 2005 0.86
204 Potential of proton-pumping rhodopsins: engineering photosystems into microorganisms. Trends Biotechnol 2013 0.86
205 Tools for the tract: understanding the functionality of the gastrointestinal tract. Therap Adv Gastroenterol 2009 0.86
206 Proteome analysis of Lactobacillus rhamnosus GG using 2-D DIGE and mass spectrometry shows differential protein production in laboratory and industrial-type growth media. J Proteome Res 2009 0.85
207 16S rRNA targeted DGGE fingerprinting of microbial communities. Methods Mol Biol 2008 0.85
208 Electron transport chains of lactic acid bacteria - walking on crutches is part of their lifestyle. F1000 Biol Rep 2009 0.85
209 Towards metagenome-scale models for industrial applications--the case of Lactic Acid Bacteria. Curr Opin Biotechnol 2012 0.85
210 Influence of glutamate on growth, sporulation, and spore properties of Bacillus cereus ATCC 14579 in defined medium. Appl Environ Microbiol 2005 0.85
211 Substrate specificity engineering of beta-mannosidase and beta-glucosidase from Pyrococcus by exchange of unique active site residues. Biochemistry 2002 0.84
212 Production by Clostridium acetobutylicum ATCC 824 of CelG, a cellulosomal glycoside hydrolase belonging to family 9. Appl Environ Microbiol 2003 0.84
213 Degradation of 1,2-dichloroethane by microbial communities from river sediment at various redox conditions. Water Res 2009 0.83
214 Overproduction of heterologous mannitol 1-phosphatase: a key factor for engineering mannitol production by Lactococcus lactis. Appl Environ Microbiol 2005 0.83
215 Optimising single cell activity assessment of Lactobacillus plantarum by fluorescent in situ hybridisation as affected by growth. J Microbiol Methods 2004 0.83
216 Genome sequence of "Pedosphaera parvula" Ellin514, an aerobic Verrucomicrobial isolate from pasture soil. J Bacteriol 2011 0.83
217 Immunostimulatory CpG motifs in the genomes of gut bacteria and their role in human health and disease. J Med Microbiol 2013 0.83
218 Involvement of the mannose phosphotransferase system of Lactobacillus plantarum WCFS1 in peroxide stress tolerance. Appl Environ Microbiol 2010 0.83
219 Development and application of a selective PCR-denaturing gradient gel electrophoresis approach to detect a recently cultivated Bacillus group predominant in soil. Appl Environ Microbiol 2004 0.82
220 Genome sequence of the verrucomicrobium Opitutus terrae PB90-1, an abundant inhabitant of rice paddy soil ecosystems. J Bacteriol 2011 0.82
221 Anaerobic benzene degradation under denitrifying conditions: Peptococcaceae as dominant benzene degraders and evidence for a syntrophic process. Environ Microbiol 2012 0.82
222 Microbial functionality in the human intestinal tract. Front Biosci (Landmark Ed) 2009 0.82
223 Isolation and characterization of a new CO-utilizing strain, Thermoanaerobacter thermohydrosulfuricus subsp. carboxydovorans, isolated from a geothermal spring in Turkey. Extremophiles 2009 0.82
224 Molecular characterization of fervidolysin, a subtilisin-like serine protease from the thermophilic bacterium Fervidobacterium pennivorans. Extremophiles 2002 0.82
225 Characterization and mode of action of an exopolygalacturonase from the hyperthermophilic bacterium Thermotoga maritima. FEBS J 2005 0.82
226 Impact of diets with a high content of greaves-meal protein or carbohydrates on faecal characteristics, volatile fatty acids and faecal calprotectin concentrations in healthy dogs. BMC Vet Res 2013 0.82
227 Discovering novel biology by in silico archaeology. Nat Rev Microbiol 2005 0.81
228 Folate overproduction in Lactobacillus plantarum WCFS1 causes methotrexate resistance. FEMS Microbiol Lett 2009 0.81
229 Advanced approaches to characterize the human intestinal microbiota by computational meta-analysis. J Clin Gastroenterol 2010 0.80
230 Improved annotation of conjugated bile acid hydrolase superfamily members in Gram-positive bacteria. Microbiology 2008 0.80
231 Novel Polyfermentor intestinal model (PolyFermS) for controlled ecological studies: validation and effect of pH. PLoS One 2013 0.80
232 Enrichment and detection of microorganisms involved in direct and indirect methanogenesis from methanol in an anaerobic thermophilic bioreactor. Microb Ecol 2005 0.80
233 Anaerostipes rhamnosivorans sp. nov., a human intestinal, butyrate-forming bacterium. Int J Syst Evol Microbiol 2013 0.79
234 Concurrent hexachlorobenzene and chloroethene transformation by endogenous dechlorinating microorganisms in the Ebro River sediment. FEMS Microbiol Ecol 2010 0.79
235 Lactic acid bacteria - Genetics, metabolism and application. FEMS Microbiol Rev 2005 0.78
236 Deletion of sigB in Bacillus cereus affects spore properties. FEMS Microbiol Lett 2005 0.78
237 Helsinki alert of biodiversity and health. Ann Med 2015 0.78
238 Genome sequence of Lactobacillus amylovorus GRL1118, isolated from pig ileum. J Bacteriol 2011 0.78
239 Large intergenic cruciform-like supermotifs in the Lactobacillus plantarum genome. J Bacteriol 2009 0.78
240 Thermal stabilization of an endoglucanase by cyclization. Appl Biochem Biotechnol 2012 0.77
241 Supplementation with engineered Lactococcus lactis improves the folate status in deficient rats. Nutrition 2010 0.77
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247 Genome sequence of Victivallis vadensis ATCC BAA-548, an anaerobic bacterium from the phylum Lentisphaerae, isolated from the human gastrointestinal tract. J Bacteriol 2011 0.76
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