Published in Biophys J on August 06, 2004
Monitoring light-induced structural changes of Channelrhodopsin-2 by UV-visible and Fourier transform infrared spectroscopy. J Biol Chem (2008) 1.83
Proton binding within a membrane protein by a protonated water cluster. Proc Natl Acad Sci U S A (2005) 1.36
Structures and spectral signatures of protonated water networks in bacteriorhodopsin. Proc Natl Acad Sci U S A (2007) 1.15
Water structural changes in the L and M photocycle intermediates of bacteriorhodopsin as revealed by time-resolved step-scan Fourier transform infrared (FTIR) spectroscopy. Biochemistry (2007) 0.92
Infrared and visible absolute and difference spectra of bacteriorhodopsin photocycle intermediates. Appl Spectrosc (2011) 0.90
A local area network of protonated water molecules. Biophys J (2004) 0.82
Sul1 and Sul2 sulfate transceptors signal to protein kinase A upon exit of sulfur starvation. J Biol Chem (2015) 0.81
Structure changes upon deprotonation of the proton release group in the bacteriorhodopsin photocycle. Biophys J (2012) 0.79
A role for internal water molecules in proton affinity changes in the Schiff base and Asp85 for one-way proton transfer in bacteriorhodopsin. Photochem Photobiol (2008) 0.79
Identification of FTIR bands due to internal water molecules around the quinone binding sites in the reaction center from Rhodobacter sphaeroides. Biochemistry (2009) 0.78
Structural changes due to the deprotonation of the proton release group in the M-photointermediate of bacteriorhodopsin as revealed by time-resolved FTIR spectroscopy. Biochemistry (2008) 0.77
Structure of bacteriorhodopsin at 1.55 A resolution. J Mol Biol (1999) 8.17
Closing in on bacteriorhodopsin: progress in understanding the molecule. Annu Rev Biophys Biomol Struct (1999) 2.39
Glutamic acid 204 is the terminal proton release group at the extracellular surface of bacteriorhodopsin. J Biol Chem (1995) 2.36
Surface-bound optical probes monitor protein translocation and surface potential changes during the bacteriorhodopsin photocycle. Proc Natl Acad Sci U S A (1992) 1.89
Protein catalysis of the retinal subpicosecond photoisomerization in the primary process of bacteriorhodopsin photosynthesis. Science (1993) 1.75
Bacteriorhodopsin's intramolecular proton-release pathway consists of a hydrogen-bonded network. Biochemistry (1998) 1.69
Direct observations of ligand dynamics in hemoglobin by subpicosecond infrared spectroscopy. Proc Natl Acad Sci U S A (1989) 1.67
Dynamics of water molecules in the bacteriorhodopsin trimer in explicit lipid/water environment. Biophys J (2004) 1.41
D38 is an essential part of the proton translocation pathway in bacteriorhodopsin. Biochemistry (1996) 1.32
pK(a) Calculations suggest storage of an excess proton in a hydrogen-bonded water network in bacteriorhodopsin. J Mol Biol (2001) 1.29
Experimental evidence for hydrogen-bonded network proton transfer in bacteriorhodopsin shown by Fourier-transform infrared spectroscopy using azide as catalyst. Proc Natl Acad Sci U S A (1995) 1.17
Time-resolved Fourier transform infrared spectroscopy of the polarizable proton continua and the proton pump mechanism of bacteriorhodopsin. Biophys J (2001) 1.02
Catalysis of the retinal subpicosecond photoisomerization process in acid purple bacteriorhodopsin and some bacteriorhodopsin mutants by chloride ions. Biophys J (1996) 0.90
Structural changes of water in the Schiff base region of bacteriorhodopsin: proposal of a hydration switch model. Biochemistry (2003) 0.87
Time-resolved long-lived infrared emission from bacteriorhodopsin during its photocycle. Biophys J (2002) 0.85
Cancer cell imaging and photothermal therapy in the near-infrared region by using gold nanorods. J Am Chem Soc (2006) 11.99
Calculated absorption and scattering properties of gold nanoparticles of different size, shape, and composition: applications in biological imaging and biomedicine. J Phys Chem B (2006) 7.53
Chemistry and properties of nanocrystals of different shapes. Chem Rev (2005) 6.83
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus). Nature (2008) 5.54
Noble metals on the nanoscale: optical and photothermal properties and some applications in imaging, sensing, biology, and medicine. Acc Chem Res (2008) 5.42
Surface plasmon resonance scattering and absorption of anti-EGFR antibody conjugated gold nanoparticles in cancer diagnostics: applications in oral cancer. Nano Lett (2005) 4.70
Plasmonic photothermal therapy (PPTT) using gold nanoparticles. Lasers Med Sci (2007) 4.39
Selective laser photo-thermal therapy of epithelial carcinoma using anti-EGFR antibody conjugated gold nanoparticles. Cancer Lett (2005) 4.19
The golden age: gold nanoparticles for biomedicine. Chem Soc Rev (2011) 3.89
Gold nanoparticles: interesting optical properties and recent applications in cancer diagnostics and therapy. Nanomedicine (Lond) (2007) 3.68
Gold nanorod assisted near-infrared plasmonic photothermal therapy (PPTT) of squamous cell carcinoma in mice. Cancer Lett (2008) 3.20
Targeting CD38 with Daratumumab Monotherapy in Multiple Myeloma. N Engl J Med (2015) 3.05
Gold and silver nanoparticles in sensing and imaging: sensitivity of plasmon response to size, shape, and metal composition. J Phys Chem B (2006) 3.01
Two-dimensional infrared spectroscopy of the alanine dipeptide in aqueous solution. J Phys Chem B (2005) 2.52
Functional waters in intraprotein proton transfer monitored by FTIR difference spectroscopy. Nature (2005) 2.31
Gold nanorods: from synthesis and properties to biological and biomedical applications. Adv Mater (2009) 2.31
Optical properties and ultrafast dynamics of metallic nanocrystals. Annu Rev Phys Chem (2002) 2.30
A reexamination of active and passive tumor targeting by using rod-shaped gold nanocrystals and covalently conjugated peptide ligands. ACS Nano (2010) 2.27
Nuclear targeting of gold nanoparticles in cancer cells induces DNA damage, causing cytokinesis arrest and apoptosis. J Am Chem Soc (2010) 2.22
Cancer cells assemble and align gold nanorods conjugated to antibodies to produce highly enhanced, sharp, and polarized surface Raman spectra: a potential cancer diagnostic marker. Nano Lett (2007) 2.04
Copy number variation of multiple genes at Rhg1 mediates nematode resistance in soybean. Science (2012) 2.01
Determination of the minimum temperature required for selective photothermal destruction of cancer cells with the use of immunotargeted gold nanoparticles. Photochem Photobiol (2006) 1.92
Plasmon coupling in nanorod assemblies: optical absorption, discrete dipole approximation simulation, and exciton-coupling model. J Phys Chem B (2006) 1.83
A global health problem caused by arsenic from natural sources. Chemosphere (2003) 1.68
Dependence of the enhanced optical scattering efficiency relative to that of absorption for gold metal nanorods on aspect ratio, size, end-cap shape, and medium refractive index. J Phys Chem B (2005) 1.67
Diabetes mellitus and the incidence of colorectal cancer: an updated systematic review and meta-analysis. Dig Dis Sci (2012) 1.56
Beating cancer in multiple ways using nanogold. Chem Soc Rev (2011) 1.51
Role of the luxS quorum-sensing system in biofilm formation and virulence of Staphylococcus epidermidis. Infect Immun (2006) 1.51
Peptide-conjugated gold nanorods for nuclear targeting. Bioconjug Chem (2007) 1.50
Catalysis with transition metal nanoparticles in colloidal solution: nanoparticle shape dependence and stability. J Phys Chem B (2005) 1.49
The safety and efficacy of stapled hemorrhoidectomy in the treatment of hemorrhoids: a systematic review and meta-analysis of ten randomized control trials. Int J Colorectal Dis (2005) 1.45
MicroRNA-17-5p promotes chemotherapeutic drug resistance and tumour metastasis of colorectal cancer by repressing PTEN expression. Oncotarget (2014) 1.44
Dynamics of water molecules in the bacteriorhodopsin trimer in explicit lipid/water environment. Biophys J (2004) 1.41
The potential use of the enhanced nonlinear properties of gold nanospheres in photothermal cancer therapy. Lasers Surg Med (2007) 1.39
PTEN loss increases PD-L1 protein expression and affects the correlation between PD-L1 expression and clinical parameters in colorectal cancer. PLoS One (2013) 1.39
Identification of MACC1 as a novel prognostic marker in hepatocellular carcinoma. J Transl Med (2011) 1.38
Proton binding within a membrane protein by a protonated water cluster. Proc Natl Acad Sci U S A (2005) 1.36
Delivery of molecules into cells using carbon nanoparticles activated by femtosecond laser pulses. Nat Nanotechnol (2010) 1.36
The GAP arginine finger movement into the catalytic site of Ras increases the activation entropy. Proc Natl Acad Sci U S A (2008) 1.30
Dual-frequency 2D-IR spectroscopy heterodyned photon echo of the peptide bond. Proc Natl Acad Sci U S A (2003) 1.27
Remote triggered release of doxorubicin in tumors by synergistic application of thermosensitive liposomes and gold nanorods. ACS Nano (2011) 1.25
Applications of gold nanorods for cancer imaging and photothermal therapy. Methods Mol Biol (2010) 1.24
Size matters: gold nanoparticles in targeted cancer drug delivery. Ther Deliv (2012) 1.22
Sex chromosomes in flowering plants. Am J Bot (2007) 1.17
Vibrational coupling, isotopic editing, and beta-sheet structure in a membrane-bound polypeptide. J Am Chem Soc (2004) 1.15
Differential regulation of interferon regulatory factor (IRF)-7 and IRF-9 gene expression in the central nervous system during viral infection. J Virol (2005) 1.15
Proton transfer via a transient linear water-molecule chain in a membrane protein. Proc Natl Acad Sci U S A (2011) 1.15
Identification and characterization of a novel Shigella flexneri serotype Yv in China. PLoS One (2013) 1.14
De novo design of conformationally flexible transmembrane peptides driving membrane fusion. Proc Natl Acad Sci U S A (2004) 1.14
Ultrafast cooling of photoexcited electrons in gold nanoparticle-thiolated DNA conjugates involves the dissociation of the gold-thiol bond. J Am Chem Soc (2006) 1.13
N-Ras forms dimers at POPC membranes. Biophys J (2012) 1.13
A novel plasmid-encoded serotype conversion mechanism through addition of phosphoethanolamine to the O-antigen of Shigella flexneri. PLoS One (2012) 1.12
Both phthiocerol dimycocerosates and phenolic glycolipids are required for virulence of Mycobacterium marinum. Infect Immun (2012) 1.12
Tamoxifen-poly(ethylene glycol)-thiol gold nanoparticle conjugates: enhanced potency and selective delivery for breast cancer treatment. Bioconjug Chem (2009) 1.12
NFκB1 and NFκBIA polymorphisms are associated with increased risk for sporadic colorectal cancer in a southern Chinese population. PLoS One (2011) 1.11
Structural basis of slow activation gating in the cardiac I Ks channel complex. Cell Physiol Biochem (2011) 1.11
Frequent epigenetic inactivation of spleen tyrosine kinase gene in human hepatocellular carcinoma. Clin Cancer Res (2006) 1.10
Universal scaling of plasmon coupling in metal nanostructures: extension from particle pairs to nanoshells. Nano Lett (2007) 1.09
Catalytic mechanism of a mammalian Rab·RabGAP complex in atomic detail. Proc Natl Acad Sci U S A (2012) 1.09
In channelrhodopsin-2 Glu-90 is crucial for ion selectivity and is deprotonated during the photocycle. J Biol Chem (2012) 1.06
A phosphoryl transfer intermediate in the GTPase reaction of Ras in complex with its GTPase-activating protein. Proc Natl Acad Sci U S A (2006) 1.06
Conversion of Staphylococcus epidermidis strains from commensal to invasive by expression of the ica locus encoding production of biofilm exopolysaccharide. Infect Immun (2005) 1.06
Proteins in action monitored by time-resolved FTIR spectroscopy. Chemphyschem (2005) 1.06
Role of Sox2 and Oct4 in predicting survival of hepatocellular carcinoma patients after hepatectomy. Clin Biochem (2011) 1.06
Isolation and genomic characterization of SfI, a serotype-converting bacteriophage of Shigella flexneri. BMC Microbiol (2013) 1.05
Effective elimination of cancer stem cells by a novel drug combination strategy. Stem Cells (2013) 1.04
Critical role of aquaporin-3 in the human epidermal growth factor-induced migration and proliferation in the human gastric adenocarcinoma cells. Cancer Biol Ther (2010) 1.03
Noble metal nanoparticle pairs: effect of medium for enhanced nanosensing. Nano Lett (2008) 1.03
Coupling of light-induced electron transfer to proton uptake in photosynthesis. Nat Struct Biol (2003) 1.02
Fourier transform infrared spectroscopy on the Rap.RapGAP reaction, GTPase activation without an arginine finger. J Biol Chem (2004) 1.02
Theoretical IR spectroscopy based on QM/MM calculations provides changes in charge distribution, bond lengths, and bond angles of the GTP ligand induced by the Ras-protein. Biophys J (2005) 1.02
Treatment of db/db diabetic mice with triptolide: a novel therapy for diabetic nephropathy. Nephrol Dial Transplant (2010) 1.02
Dark-field light scattering imaging of living cancer cell component from birth through division using bioconjugated gold nanoprobes. J Biomed Opt (2010) 1.02
Observing real-time molecular event dynamics of apoptosis in living cancer cells using nuclear-targeted plasmonically enhanced Raman nanoprobes. ACS Nano (2014) 1.01
Surface change of Ras enabling effector binding monitored in real time at atomic resolution. Chembiochem (2007) 1.01
The optical, photothermal, and facile surface chemical properties of gold and silver nanoparticles in biodiagnostics, therapy, and drug delivery. Arch Toxicol (2014) 1.01
The most effective gold nanorod size for plasmonic photothermal therapy: theory and in vitro experiments. J Phys Chem B (2014) 1.00
Ras and GTPase-activating protein (GAP) drive GTP into a precatalytic state as revealed by combining FTIR and biomolecular simulations. Proc Natl Acad Sci U S A (2012) 0.99
Prediction of a ligand-binding niche within a human olfactory receptor by combining site-directed mutagenesis with dynamic homology modeling. Angew Chem Int Ed Engl (2011) 0.98
Synthesis and optical properties of small Au nanorods using a seedless growth technique. Langmuir (2012) 0.98
Label-free capacitive immunosensor based on quartz crystal Au electrode for rapid and sensitive detection of Escherichia coli O157:H7. Anal Chim Acta (2010) 0.98
Detecting and destroying cancer cells in more than one way with noble metals and different confinement properties on the nanoscale. Acc Chem Res (2012) 0.98
Evaluation of different micro/nanobeads used as amplifiers in QCM immunosensor for more sensitive detection of E. coli O157:H7. Biosens Bioelectron (2011) 0.98
Development of a multiplex PCR assay targeting O-antigen modification genes for molecular serotyping of Shigella flexneri. J Clin Microbiol (2011) 0.98
Clinical outcomes of active specific immunotherapy in advanced colorectal cancer and suspected minimal residual colorectal cancer: a meta-analysis and system review. J Transl Med (2011) 0.97
Nuclear targeted silver nanospheres perturb the cancer cell cycle differently than those of nanogold. Bioconjug Chem (2011) 0.97
Effect of orientation on plasmonic coupling between gold nanorods. ACS Nano (2009) 0.97
Immunosensors for detection of pesticide residues. Biosens Bioelectron (2008) 0.97
A new catalytically active colloidal platinum nanocatalyst: the multiarmed nanostar single crystal. J Am Chem Soc (2008) 0.97
NTRK3 is a potential tumor suppressor gene commonly inactivated by epigenetic mechanisms in colorectal cancer. PLoS Genet (2013) 0.96
Progesterone exerts neuroprotective effects by inhibiting inflammatory response after stroke. Inflamm Res (2009) 0.96
Role of ClpP in biofilm formation and virulence of Staphylococcus epidermidis. Microbes Infect (2007) 0.96
Unravelling the mechanism of dual-specificity GAPs. EMBO J (2010) 0.96
Structural changes of membrane-anchored native PrP(C). Proc Natl Acad Sci U S A (2008) 0.96
Genesis of a novel Shigella flexneri serotype by sequential infection of serotype-converting bacteriophages SfX and SfI. BMC Microbiol (2011) 0.96
Simultaneous liver and colorectal resections are safe for synchronous colorectal liver metastases. J Gastrointest Surg (2010) 0.95
A direct cross-talk between interferon-gamma and sonic hedgehog signaling that leads to the proliferation of neuronal precursor cells. Brain Behav Immun (2009) 0.95
Comparative study of photothermolysis of cancer cells with nuclear-targeted or cytoplasm-targeted gold nanospheres: continuous wave or pulsed lasers. J Biomed Opt (2010) 0.95