Published in J Bacteriol on November 01, 2004
Evolutionary changes of the flhDC flagellar master operon in Shigella strains. J Bacteriol (2005) 0.94
Use of the tna operon as a new molecular target for Escherichia coli detection. Appl Environ Microbiol (2007) 0.87
Molecular Differentiation of Shigella Spp. from Enteroinvasive E. Coli. Eur J Microbiol Immunol (Bp) (2016) 0.78
Consed: a graphical tool for sequence finishing. Genome Res (1998) 59.36
Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18. Nature (2001) 15.44
Genome sequence of Yersinia pestis, the causative agent of plague. Nature (2001) 14.36
Insertion sequences. Microbiol Mol Biol Rev (1998) 14.03
Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis. Proc Natl Acad Sci U S A (1999) 10.34
The population genetics of ecological specialization in evolving Escherichia coli populations. Nature (2000) 5.80
Complete genome sequence and comparative genomics of Shigella flexneri serotype 2a strain 2457T. Infect Immun (2003) 5.11
"Black holes" and bacterial pathogenicity: a large genomic deletion that enhances the virulence of Shigella spp. and enteroinvasive Escherichia coli. Proc Natl Acad Sci U S A (1998) 5.02
Multiple independent origins of Shigella clones of Escherichia coli and convergent evolution of many of their characteristics. Proc Natl Acad Sci U S A (2000) 4.96
Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157. Nucleic Acids Res (2002) 4.92
Mechanisms causing rapid and parallel losses of ribose catabolism in evolving populations of Escherichia coli B. J Bacteriol (2001) 3.84
The virulence plasmid pWR100 and the repertoire of proteins secreted by the type III secretion apparatus of Shigella flexneri. Mol Microbiol (2000) 3.13
Escherichia coli in disguise: molecular origins of Shigella. Microbes Infect (2002) 2.27
Indole can act as an extracellular signal in Escherichia coli. J Bacteriol (2001) 2.03
Physiological studies of tryptophan transport and tryptophanase operon induction in Escherichia coli. J Bacteriol (1991) 1.79
Complete DNA sequence and analysis of the large virulence plasmid of Shigella flexneri. Infect Immun (2001) 1.77
Pathoadaptive mutations that enhance virulence: genetic organization of the cadA regions of Shigella spp. Infect Immun (2001) 1.76
MULTICOMP: a program for preparing sequence data for phylogenetic analysis. Comput Appl Biosci (1994) 1.51
Isolation of an Escherichia coil strain mutant unable to form biofilm on polystyrene and to adhere to human pneumocyte cells: involvement of tryptophanase. Can J Microbiol (2002) 1.02
Possible mechanisms underlying the slow lactose fermentation phenotype in Shigella spp. Appl Environ Microbiol (1991) 1.02
Characterization of cryptic flagellin genes in Shigella boydii and Shigella dysenteriae. Genes Genet Syst (2001) 0.82
Sex and virulence in Escherichia coli: an evolutionary perspective. Mol Microbiol (2006) 14.53
Genetic analysis of the capsular biosynthetic locus from all 90 pneumococcal serotypes. PLoS Genet (2006) 6.43
A recalibrated molecular clock and independent origins for the cholera pandemic clones. PLoS One (2008) 3.16
Predicted functions and linkage specificities of the products of the Streptococcus pneumoniae capsular biosynthetic loci. J Bacteriol (2007) 2.67
Genomic sequencing reveals regulatory mutations and recombinational events in the widely used MC4100 lineage of Escherichia coli K-12. J Bacteriol (2009) 2.51
Escherichia coli in disguise: molecular origins of Shigella. Microbes Infect (2002) 2.27
Structure and genetics of Shigella O antigens. FEMS Microbiol Rev (2008) 2.11
Genetic relatedness of the Streptococcus pneumoniae capsular biosynthetic loci. J Bacteriol (2007) 1.92
Derivation of Escherichia coli O157:H7 from its O55:H7 precursor. PLoS One (2010) 1.90
Global population structure and evolution of Bordetella pertussis and their relationship with vaccination. MBio (2014) 1.76
Species-wide variation in the Escherichia coli flagellin (H-antigen) gene. J Bacteriol (2003) 1.73
Emergence of a new multidrug-resistant serotype X variant in an epidemic clone of Shigella flexneri. J Clin Microbiol (2009) 1.71
Evolution of seventh cholera pandemic and origin of 1991 epidemic, Latin America. Emerg Infect Dis (2010) 1.66
Molecular evolutionary relationships of enteroinvasive Escherichia coli and Shigella spp. Infect Immun (2004) 1.59
The O-antigen gene cluster of Escherichia coli O55:H7 and identification of a new UDP-GlcNAc C4 epimerase gene. J Bacteriol (2002) 1.50
Rapid increase in pertactin-deficient Bordetella pertussis isolates, Australia. Emerg Infect Dis (2014) 1.43
Single-nucleotide-polymorphism typing and genetic relationships of Salmonella enterica serovar Typhi isolates. J Clin Microbiol (2007) 1.43
Rates of mutation and host transmission for an Escherichia coli clone over 3 years. PLoS One (2011) 1.40
Genetic diversity and molecular typing of Listeria monocytogenes in China. BMC Microbiol (2012) 1.35
Multiple-locus variable-number tandem-repeat analysis of Salmonella enterica serovar Typhi. J Clin Microbiol (2009) 1.29
Vibrio cholerae pathogenic clones. Emerg Infect Dis (2005) 1.24
Newly emerging clones of Bordetella pertussis carrying prn2 and ptxP3 alleles implicated in Australian pertussis epidemic in 2008-2010. J Infect Dis (2012) 1.22
Pandemic spread of cholera: genetic diversity and relationships within the seventh pandemic clone of Vibrio cholerae determined by amplified fragment length polymorphism. J Clin Microbiol (2002) 1.21
Population structure of Helicobacter pylori among ethnic groups in Malaysia: recent acquisition of the bacterium by the Malay population. BMC Microbiol (2009) 1.17
Divergence involving global regulatory gene mutations in an Escherichia coli population evolving under phosphate limitation. Genome Biol Evol (2010) 1.17
Insight into evolution of Bordetella pertussis from comparative genomic analysis: evidence of vaccine-driven selection. Mol Biol Evol (2010) 1.15
Structural diversity in Salmonella O antigens and its genetic basis. FEMS Microbiol Rev (2013) 1.15
Minimum core genome sequence typing of bacterial pathogens: a unified approach for clinical and public health microbiology. J Clin Microbiol (2013) 1.15
Identification and characterization of a novel Shigella flexneri serotype Yv in China. PLoS One (2013) 1.14
Population structure, origins and evolution of major Salmonella enterica clones. Infect Genet Evol (2009) 1.13
A novel plasmid-encoded serotype conversion mechanism through addition of phosphoethanolamine to the O-antigen of Shigella flexneri. PLoS One (2012) 1.12
Development of multiplex PCR assays for the identification of the 33 serotypes of Streptococcus suis. PLoS One (2013) 1.08
The multiplicity of divergence mechanisms in a single evolving population. Genome Biol (2012) 1.05
Relationships of the Escherichia coli O157, O111, and O55 O-antigen gene clusters with those of Salmonella enterica and Citrobacter freundii, which express identical O antigens. J Bacteriol (2004) 1.05
Isolation and genomic characterization of SfI, a serotype-converting bacteriophage of Shigella flexneri. BMC Microbiol (2013) 1.05
Structural and genetic characterization of enterohemorrhagic Escherichia coli O145 O antigen and development of an O145 serogroup-specific PCR assay. J Bacteriol (2005) 1.05
Multi-locus variable number tandem repeat analysis of 7th pandemic Vibrio cholerae. BMC Microbiol (2012) 1.04
Structural and genetic evidence that the Escherichia coli O148 O antigen is the precursor of the Shigella dysenteriae type 1 O antigen and identification of a glucosyltransferase gene. Microbiology (2007) 1.03
Investigation of the enteric pathogenic potential of oral Campylobacter concisus strains isolated from patients with inflammatory bowel disease. PLoS One (2012) 1.03
Bordetella pertussis clones identified by multilocus variable-number tandem-repeat analysis. Emerg Infect Dis (2010) 1.03
The prevalence and polymorphisms of zonula occluden toxin gene in multiple Campylobacter concisus strains isolated from saliva of patients with inflammatory bowel disease and controls. PLoS One (2013) 1.00
Population structure and evolution of non-O1/non-O139 Vibrio cholerae by multilocus sequence typing. PLoS One (2013) 1.00
Development of a multiplex PCR assay for detection and genogrouping of Neisseria meningitidis. J Clin Microbiol (2011) 0.99
Conditions for the evolution of gene clusters in bacterial genomes. PLoS Comput Biol (2010) 0.98
Selection and emergence of pertussis toxin promoter ptxP3 allele in the evolution of Bordetella pertussis. Infect Genet Evol (2012) 0.98
Diversity in the major polysaccharide antigen of Acinetobacter baumannii assessed by DNA sequencing, and development of a molecular serotyping scheme. PLoS One (2013) 0.98
Development of a multiplex PCR assay targeting O-antigen modification genes for molecular serotyping of Shigella flexneri. J Clin Microbiol (2011) 0.98
Genome-wide analysis of single nucleotide polymorphisms in Bordetella pertussis using comparative genomic sequencing. Res Microbiol (2008) 0.97
Frequent recombination and low level of clonality within Salmonella enterica subspecies I. Microbiology (2006) 0.97
A novel Escherichia coli O157:H7 clone causing a major hemolytic uremic syndrome outbreak in China. PLoS One (2012) 0.97
A group of Escherichia coli and Salmonella enterica O antigens sharing a common backbone structure. Microbiology (2007) 0.96
Genesis of a novel Shigella flexneri serotype by sequential infection of serotype-converting bacteriophages SfX and SfI. BMC Microbiol (2011) 0.96
The variation of O antigens in gram-negative bacteria. Subcell Biochem (2010) 0.94
Relationship of Yersinia pseudotuberculosis O antigens IA, IIA, and IVB: the IIA gene cluster was derived from that of IVB. Infect Immun (2002) 0.94
Evolutionary changes of the flhDC flagellar master operon in Shigella strains. J Bacteriol (2005) 0.94
The Wzx translocases for Salmonella enterica O-antigen processing have unexpected serotype specificity. Mol Microbiol (2012) 0.94
Isolation and characterization of cytotoxic, aggregative Citrobacter freundii. PLoS One (2012) 0.94
Molecular analysis of non-O1/non-O139 Vibrio cholerae isolated from hospitalised patients in China. BMC Microbiol (2013) 0.94
Comparison of two major forms of the Shigella virulence plasmid pINV: positive selection is a major force driving the divergence. Infect Immun (2003) 0.94
Identification of genes and genomic islands correlated with high pathogenicity in Streptococcus suis using whole genome tiling microarrays. PLoS One (2011) 0.93
Characterization of Shiga toxin-producing Escherichia coli isolated from healthy pigs in China. BMC Microbiol (2014) 0.93
O-antigen structure of Shigella flexneri serotype Yv and effect of the lpt-O gene variation on phosphoethanolamine modification of S. flexneri O-antigens. Glycobiology (2013) 0.93
Genetic relationships of phage types and single nucleotide polymorphism typing of Salmonella enterica Serovar Typhimurium. J Clin Microbiol (2012) 0.93
Shiga toxin-producing Escherichia coli in yaks (Bos grunniens) from the Qinghai-Tibetan Plateau, China. PLoS One (2013) 0.91
Synthesis of the heteropolysaccharide O antigen of Escherichia coli O52 requires an ABC transporter: structural and genetic evidence. J Bacteriol (2004) 0.91
Genomic diversity and adaptation of Salmonella enterica serovar Typhimurium from analysis of six genomes of different phage types. BMC Genomics (2013) 0.90
The variation of dTDP-L-rhamnose pathway genes in Vibrio cholerae. Microbiology (2003) 0.89
Membrane topology of the Salmonella enterica serovar Typhimurium Group B O-antigen translocase Wzx. FEMS Microbiol Lett (2008) 0.89
Emergence of a novel Shigella flexneri serotype 1d in China. Diagn Microbiol Infect Dis (2012) 0.89
Extensive variation in the O-antigen gene cluster within one Salmonella enterica serogroup reveals an unexpected complex history. J Bacteriol (2002) 0.88
The Yersinia kristensenii O11 O-antigen gene cluster was acquired by lateral gene transfer and incorporated at a novel chromosomal locus. Mol Biol Evol (2007) 0.87
Identification of an O-acyltransferase gene (oacB) that mediates 3- and 4-O-acetylation of rhamnose III in Shigella flexneri O antigens. J Bacteriol (2014) 0.87
Genomic portrait of the evolution and epidemic spread of a recently emerged multidrug-resistant Shigella flexneri clone in China. J Clin Microbiol (2014) 0.86
Adaptation of multilocus sequencing for studying variation within a major clone: evolutionary relationships of Salmonella enterica serovar Typhimurium. Genetics (2005) 0.86
Genomic identification of a novel mutation in hfq that provides multiple benefits in evolving glucose-limited populations of Escherichia coli. J Bacteriol (2010) 0.86
Rapid and accurate typing of Bordetella pertussis targeting genes encoding acellular vaccine antigens using real time PCR and High Resolution Melt analysis. J Microbiol Methods (2009) 0.86
Dissemination and serotype modification potential of pSFxv_2, an O-antigen PEtN modification plasmid in Shigella flexneri. Glycobiology (2013) 0.86
Population structure and evolution of pathogenicity of Yersinia pseudotuberculosis. Appl Environ Microbiol (2010) 0.85
Diversity of o-antigen repeat unit structures can account for the substantial sequence variation of wzx translocases. J Bacteriol (2014) 0.85
Importation of the major pilin TcpA gene and frequent recombination drive the divergence of the Vibrio pathogenicity island in Vibrio cholerae. FEMS Microbiol Lett (2008) 0.85
Genetic analysis of the O-antigen gene clusters of Yersinia pseudotuberculosis O:6 and O:7. Glycobiology (2011) 0.85
Deletion of the Escherichia coli O14:K7 O antigen gene cluster. Can J Microbiol (2004) 0.84
The Wzy O-antigen polymerase of Yersinia pseudotuberculosis O:2a has a dependence on the Wzz chain-length determinant for efficient polymerization. FEMS Microbiol Lett (2013) 0.84
Biosynthesis of UDP-GlcNAc, UndPP-GlcNAc and UDP-GlcNAcA involves three easily distinguished 4-epimerase enzymes, Gne, Gnu and GnaB. PLoS One (2013) 0.84
The distribution of insertion sequences in the genome of Shigella flexneri strain 2457T. FEMS Microbiol Lett (2007) 0.83
Fluorescent amplified fragment length polymorphism analysis of Salmonella enterica serovar typhimurium reveals phage-type- specific markers and potential for microarray typing. J Clin Microbiol (2002) 0.83