Published in Chaos on March 01, 2005
Effects of mucosal loading on vocal fold vibration. Chaos (2009) 0.75
Biological profiling of gene groups utilizing Gene Ontology. Genome Inform (2005) 4.10
Differential effects of PER2 phosphorylation: molecular basis for the human familial advanced sleep phase syndrome (FASPS). Genes Dev (2006) 3.78
Spontaneous synchronization of coupled circadian oscillators. Biophys J (2005) 2.55
UniHI: an entry gate to the human protein interactome. Nucleic Acids Res (2006) 2.45
Mathematical modeling identifies inhibitors of apoptosis as mediators of positive feedback and bistability. PLoS Comput Biol (2006) 2.30
Molecular insights into human daily behavior. Proc Natl Acad Sci U S A (2008) 2.03
Coupling governs entrainment range of circadian clocks. Mol Syst Biol (2010) 1.85
Effects of sequestration on signal transduction cascades. FEBS J (2006) 1.84
Identification of cyanobacterial non-coding RNAs by comparative genome analysis. Genome Biol (2005) 1.82
Comparison of human protein-protein interaction maps. Bioinformatics (2007) 1.79
Synchronization-induced rhythmicity of circadian oscillators in the suprachiasmatic nucleus. PLoS Comput Biol (2007) 1.71
Regulation of clock-controlled genes in mammals. PLoS One (2009) 1.65
Beta-TrCP1-mediated degradation of PERIOD2 is essential for circadian dynamics. J Biol Rhythms (2007) 1.64
How robust are switches in intracellular signaling cascades? J Theor Biol (2003) 1.47
Functioning and robustness of a bacterial circadian clock. Mol Syst Biol (2007) 1.46
Modeling feedback loops of the Mammalian circadian oscillator. Biophys J (2004) 1.45
Comparison of biomechanical modeling of register transitions and voice instabilities with excised larynx experiments. J Acoust Soc Am (2007) 1.43
Recurrent design patterns in the feedback regulation of the mammalian signalling network. Mol Syst Biol (2008) 1.41
Modelling transcriptional feedback loops: the role of Gro/TLE1 in Hes1 oscillations. Philos Trans A Math Phys Eng Sci (2006) 1.36
Inferring combinatorial regulation of transcription in silico. Nucleic Acids Res (2005) 1.26
Small RNAs establish delays and temporal thresholds in gene expression. Biophys J (2008) 1.24
Bifurcation analysis of the regulatory modules of the mammalian G1/S transition. Bioinformatics (2004) 1.22
Are we overestimating the number of cell-cycling genes? The impact of background models on time-series analysis. Bioinformatics (2008) 1.20
Tuning the mammalian circadian clock: robust synergy of two loops. PLoS Comput Biol (2011) 1.18
Experimental and computational analysis of transcriptional start sites in the cyanobacterium Prochlorococcus MED4. Nucleic Acids Res (2003) 1.18
Nonlinear analysis of irregular animal vocalizations. J Acoust Soc Am (2002) 1.17
Quantification of circadian rhythms in single cells. PLoS Comput Biol (2009) 1.14
Competing docking interactions can bring about bistability in the MAPK cascade. Biophys J (2007) 1.13
Measuring similarities between transcription factor binding sites. BMC Bioinformatics (2005) 1.13
Identification of Y-box binding protein 1 as a core regulator of MEK/ERK pathway-dependent gene signatures in colorectal cancer cells. PLoS Genet (2010) 1.12
Global parameter search reveals design principles of the mammalian circadian clock. BMC Syst Biol (2008) 1.08
Quantitative analysis of ultrasensitive responses. FEBS J (2005) 1.08
Identification of distinct antibody epitopes and mimotopes from a peptide array of 5520 randomly generated sequences. J Immunol Methods (2002) 1.05
Periodicities of 10-11bp as indicators of the supercoiled state of genomic DNA. J Mol Biol (2004) 1.05
How to achieve fast entrainment? The timescale to synchronization. PLoS One (2009) 1.04
Entrainment in a model of the mammalian circadian oscillator. J Biol Rhythms (2005) 1.03
HuSiDa--the human siRNA database: an open-access database for published functional siRNA sequences and technical details of efficient transfer into recipient cells. Nucleic Acids Res (2005) 1.02
Nonlinear phenomena in contemporary vocal music. J Voice (2004) 0.98
DNA motifs and sequence periodicities. In Silico Biol (2006) 0.98
Systematic functional assessment of human protein-protein interaction maps. Genome Inform (2006) 0.97
Biomechanical modeling of register transitions and the role of vocal tract resonators. J Acoust Soc Am (2010) 0.96
Ultrasensitization: switch-like regulation of cellular signaling by transcriptional induction. PLoS Comput Biol (2005) 0.95
Repeats and correlations in human DNA sequences. Phys Rev E Stat Nonlin Soft Matter Phys (2003) 0.94
Bifurcations and chaos in register transitions of excised larynx experiments. Chaos (2008) 0.93
The interplay of cis-regulatory elements rules circadian rhythms in mouse liver. PLoS One (2012) 0.93
Why do cells cycle with a 24 hour period? Genome Inform (2006) 0.92
Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Res (2009) 0.92
Biomechanics and control of vocalization in a non-songbird. J R Soc Interface (2008) 0.91
Mechanism for 12 hr rhythm generation by the circadian clock. Cell Rep (2013) 0.91
Human chronotypes from a theoretical perspective. PLoS One (2013) 0.90
Promoter analysis of Mammalian clock controlled genes. Genome Inform (2007) 0.90
Visualization of system dynamics using phasegrams. J R Soc Interface (2013) 0.90
High reproducibility of large-gel two-dimensional electrophoresis. Electrophoresis (2004) 0.89
Reverse engineering a hierarchical regulatory network downstream of oncogenic KRAS. Mol Syst Biol (2012) 0.88
Tumor growth rate determines the timing of optimal chronomodulated treatment schedules. PLoS Comput Biol (2010) 0.88
Circadian desynchronization. Interface Focus (2010) 0.84
Global analysis of host tissue gene expression in the invasive front of colorectal liver metastases. Int J Cancer (2006) 0.83
3D-Image analysis platform monitoring relocation of pluripotency genes during reprogramming. Nucleic Acids Res (2011) 0.83
Prediction of cis-regulatory elements of coregulated genes. Genome Inform (2004) 0.83
Prediction of regulatory transcription factors in T helper cell differentiation and maintenance. Genome Inform (2010) 0.83
Dissecting the action of an evolutionary conserved non-coding region on renin promoter activity. Nucleic Acids Res (2007) 0.83
HOMGL-comparing genelists across species and with different accession numbers. Bioinformatics (2004) 0.82
Regulation of mammalian cell cycle progression in the regenerating liver. J Theor Biol (2011) 0.80
Kinetic mechanisms for overexpression insensitivity and oncogene cooperation. FEBS Lett (2008) 0.80
IL-2 Expression in Activated Human Memory FOXP3(+) Cells Critically Depends on the Cellular Levels of FOXP3 as Well as of Four Transcription Factors of T Cell Activation. Front Immunol (2012) 0.80
Stable IL-2 decision making by endogenous c-Fos amounts in peripheral memory T-helper cells. J Biol Chem (2012) 0.80
A model of the mammalian circadian oscillator including the REV-ERBalpha module. Genome Inform (2004) 0.79
Death of neuronal clusters contributes to variance of age at onset in Huntington's disease. Neurogenetics (2006) 0.79
Graph-theoretical comparison reveals structural divergence of human protein interaction networks. Genome Inform (2007) 0.78
A minimal circadian clock model. Genome Inform (2007) 0.78
A mesoscale model of G1/S phase transition in liver regeneration. J Theor Biol (2008) 0.78
Aggregation in Huntington's disease: insights through modelling. Genome Inform (2005) 0.77
Regulatory elements of marine cyanobacteria. Genome Inform (2007) 0.77
Modeling IL-2 gene expression in human regulatory T cells. Genome Inform (2008) 0.76
Alternans and 2:1 rhythms in an ionic model of heart cells. Biosystems (2002) 0.75
Sequence-related human proteins cluster by degree of evolutionary conservation. Phys Rev E Stat Nonlin Soft Matter Phys (2004) 0.75