Published in Environ Microbiol on October 01, 2005
Patterns and implications of gene gain and loss in the evolution of Prochlorococcus. PLoS Genet (2007) 4.25
Ecological genomics of marine picocyanobacteria. Microbiol Mol Biol Rev (2009) 3.62
Unraveling the genomic mosaic of a ubiquitous genus of marine cyanobacteria. Genome Biol (2008) 2.06
Complex microbiome underlying secondary and primary metabolism in the tunicate-Prochloron symbiosis. Proc Natl Acad Sci U S A (2011) 1.25
Genetic manipulation of Prochlorococcus strain MIT9313: green fluorescent protein expression from an RSF1010 plasmid and Tn5 transposition. Appl Environ Microbiol (2006) 1.12
Genome-wide analysis of light sensing in Prochlorococcus. J Bacteriol (2006) 1.06
The chloroplast proteome: a survey from the Chlamydomonas reinhardtii perspective with a focus on distinctive features. Curr Genet (2011) 1.05
Comparative transcriptomics of two environmentally relevant cyanobacteria reveals unexpected transcriptome diversity. ISME J (2014) 0.95
Biogeography of photosynthetic light-harvesting genes in marine phytoplankton. PLoS One (2009) 0.92
CpeS is a lyase specific for attachment of 3Z-PEB to Cys82 of {beta}-phycoerythrin from Prochlorococcus marinus MED4. J Biol Chem (2010) 0.87
Phycobilisomes linker family in cyanobacterial genomes: divergence and evolution. Int J Biol Sci (2007) 0.86
Characterization of the activities of the CpeY, CpeZ, and CpeS bilin lyases in phycoerythrin biosynthesis in Fremyella diplosiphon strain UTEX 481. J Biol Chem (2011) 0.86
Interdependence of tetrapyrrole metabolism, the generation of oxidative stress and the mitigative oxidative stress response. Redox Biol (2015) 0.80
Auxiliary metabolic genes- Distinct Features of Cyanophage-encoded T-type Phycobiliprotein Lyase θCpeT. J Biol Chem (2017) 0.75
Metagenomic Analysis of the Indian Ocean Picocyanobacterial Community: Structure, Potential Function and Evolution. PLoS One (2016) 0.75
Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation. Nature (2003) 8.53
Comparative analysis of the complete genome sequence of the plant growth-promoting bacterium Bacillus amyloliquefaciens FZB42. Nat Biotechnol (2007) 4.66
Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome. Proc Natl Acad Sci U S A (2003) 3.55
An experimentally anchored map of transcriptional start sites in the model cyanobacterium Synechocystis sp. PCC6803. Proc Natl Acad Sci U S A (2011) 2.84
cis-antisense RNA, another level of gene regulation in bacteria. Microbiol Mol Biol Rev (2011) 2.78
The Aspergillus nidulans phytochrome FphA represses sexual development in red light. Curr Biol (2005) 2.62
Genome-wide expression dynamics of a marine virus and host reveal features of co-evolution. Nature (2007) 2.27
Unraveling the genomic mosaic of a ubiquitous genus of marine cyanobacteria. Genome Biol (2008) 2.06
Evidence for a major role of antisense RNAs in cyanobacterial gene regulation. Mol Syst Biol (2009) 2.02
An internal antisense RNA regulates expression of the photosynthesis gene isiA. Proc Natl Acad Sci U S A (2006) 1.95
Identification of cyanobacterial non-coding RNAs by comparative genome analysis. Genome Biol (2005) 1.82
The challenge of regulation in a minimal photoautotroph: non-coding RNAs in Prochlorococcus. PLoS Genet (2008) 1.74
Dynamics of transcriptional start site selection during nitrogen stress-induced cell differentiation in Anabaena sp. PCC7120. Proc Natl Acad Sci U S A (2011) 1.67
Computational prediction of sRNAs and their targets in bacteria. RNA Biol (2010) 1.49
Genomic insights into the physiology and ecology of the marine filamentous cyanobacterium Lyngbya majuscula. Proc Natl Acad Sci U S A (2011) 1.40
Evidence for the rapid expansion of microRNA-mediated regulation in early land plant evolution. BMC Plant Biol (2007) 1.38
The heme oxygenase(s)-phytochrome system of Pseudomonas aeruginosa. J Biol Chem (2004) 1.35
Efficient phage-mediated pigment biosynthesis in oceanic cyanobacteria. Curr Biol (2008) 1.33
Comparative genomics boosts target prediction for bacterial small RNAs. Proc Natl Acad Sci U S A (2013) 1.29
Biochemical and spectroscopic characterization of the bacterial phytochrome of Pseudomonas aeruginosa. FEBS J (2005) 1.29
Biocomputational prediction of non-coding RNAs in model cyanobacteria. BMC Genomics (2009) 1.25
Experimental and computational analysis of transcriptional start sites in the cyanobacterium Prochlorococcus MED4. Nucleic Acids Res (2003) 1.18
Microevolution in cyanobacteria: re-sequencing a motile substrain of Synechocystis sp. PCC 6803. DNA Res (2012) 1.14
Fluorescence staining of live cyanobacterial cells suggest non-stringent chromosome segregation and absence of a connection between cytoplasmic and thylakoid membranes. BMC Cell Biol (2007) 1.13
CRISPR-Cas systems in the cyanobacterium Synechocystis sp. PCC6803 exhibit distinct processing pathways involving at least two Cas6 and a Cmr2 protein. PLoS One (2013) 1.13
Genetic manipulation of Prochlorococcus strain MIT9313: green fluorescent protein expression from an RSF1010 plasmid and Tn5 transposition. Appl Environ Microbiol (2006) 1.12
A novel type of lycopene epsilon-cyclase in the marine cyanobacterium Prochlorococcus marinus MED4. Arch Microbiol (2003) 1.07
Adaptation and modification of three CRISPR loci in two closely related cyanobacteria. RNA Biol (2013) 1.06
The antisense RNA As1_flv4 in the Cyanobacterium Synechocystis sp. PCC 6803 prevents premature expression of the flv4-2 operon upon shift in inorganic carbon supply. J Biol Chem (2012) 1.06
Chloroplast development affects expression of phage-type RNA polymerases in barley leaves. Plant J (2004) 1.06
The infinitely many genes model for the distributed genome of bacteria. Genome Biol Evol (2012) 1.05
Heterocyst differentiation: from single mutants to global approaches. Trends Microbiol (2012) 1.03
The Yfr2 ncRNA family, a group of abundant RNA molecules widely conserved in cyanobacteria. RNA Biol (2009) 1.03
The cyanobacterial homologue of the RNA chaperone Hfq is essential for motility of Synechocystis sp. PCC 6803. Microbiology (2008) 1.02
Two distinct types of 6S RNA in Prochlorococcus. Gene (2007) 1.02
Positive regulation of psbA gene expression by cis-encoded antisense RNAs in Synechocystis sp. PCC 6803. Plant Physiol (2012) 1.02
Genome streamlining results in loss of robustness of the circadian clock in the marine cyanobacterium Prochlorococcus marinus PCC 9511. J Biol Rhythms (2008) 1.01
Small RNA-mediated control of the Agrobacterium tumefaciens GABA binding protein. Mol Microbiol (2011) 1.00
Structure of transcription factor HetR required for heterocyst differentiation in cyanobacteria. Proc Natl Acad Sci U S A (2011) 0.99
A motif-based search in bacterial genomes identifies the ortholog of the small RNA Yfr1 in all lineages of cyanobacteria. BMC Genomics (2007) 0.98
Function and distribution of bilin biosynthesis enzymes in photosynthetic organisms. Photochem Photobiol Sci (2008) 0.97
Heterocyst-specific transcription of NsiR1, a non-coding RNA encoded in a tandem array of direct repeats in cyanobacteria. J Mol Biol (2010) 0.97
A new chlorophyll d-containing cyanobacterium: evidence for niche adaptation in the genus Acaryochloris. ISME J (2010) 0.97
Characterization of the haem oxygenase protein family in Arabidopsis thaliana reveals a diversity of functions. Biochem J (2010) 0.96
Iron deprivation in Synechocystis: inference of pathways, non-coding RNAs, and regulatory elements from comprehensive expression profiling. G3 (Bethesda) (2012) 0.93
Glucosylglycerate: a secondary compatible solute common to marine cyanobacteria from nitrogen-poor environments. Environ Microbiol (2009) 0.92
The fungal phytochrome FphA from Aspergillus nidulans. J Biol Chem (2008) 0.92
Draft Genome Sequence of the Filamentous Cyanobacterium Leptolyngbya sp. Strain Heron Island J, Exhibiting Chromatic Acclimation. Genome Announc (2014) 0.92
Long term seasonal dynamics of synechococcus population structure in the gulf of aqaba, northern red sea. Front Microbiol (2011) 0.91
NO-induced biofilm dispersion in Pseudomonas aeruginosa is mediated by an MHYT domain-coupled phosphodiesterase. J Bacteriol (2013) 0.91
Analysis of natural populations of Prochlorococcus spp. in the northern Red Sea using phycoerythrin gene sequences. Environ Microbiol (2003) 0.90
Phycoerythrobilin synthase (PebS) of a marine virus. Crystal structures of the biliverdin complex and the substrate-free form. J Biol Chem (2008) 0.90
Photophysical properties of Prochlorococcus marinus SS120 divinyl chlorophylls and phycoerythrin in vitro and in vivo. FEBS Lett (2003) 0.89
The gene sml0013 of Synechocystis species strain PCC 6803 encodes for a novel subunit of the NAD(P)H oxidoreductase or complex I that is ubiquitously distributed among Cyanobacteria. Plant Physiol (2013) 0.89
Synchronized expression of ftsZ in natural Prochlorococcus populations of the Red Sea. Environ Microbiol (2002) 0.89
Insights into the physiology and ecology of the brackish-water-adapted Cyanobacterium Nodularia spumigena CCY9414 based on a genome-transcriptome analysis. PLoS One (2013) 0.89
Non-coding RNAs in marine Synechococcus and their regulation under environmentally relevant stress conditions. ISME J (2012) 0.88
Small RNAs of the halophilic archaeon Haloferax volcanii. Biochem Soc Trans (2009) 0.87
CpeS is a lyase specific for attachment of 3Z-PEB to Cys82 of {beta}-phycoerythrin from Prochlorococcus marinus MED4. J Biol Chem (2010) 0.87
Characterization of true-branching cyanobacteria from geothermal sites and hot springs of Costa Rica. Environ Microbiol (2007) 0.86
An antisense RNA in a lytic cyanophage links psbA to a gene encoding a homing endonuclease. ISME J (2010) 0.86
Regulatory RNAs in cyanobacteria: developmental decisions, stress responses and a plethora of chromosomally encoded cis-antisense RNAs. Biol Chem (2011) 0.86
Bioinformatic prediction and experimental verification of sRNAs in the haloarchaeon Haloferax volcanii. RNA Biol (2011) 0.86
Hemin and magnesium-protoporphyrin IX induce global changes in gene expression in Chlamydomonas reinhardtii. Plant Physiol (2010) 0.86
Expression of small RNAs in Rhizobiales and protection of a small RNA and its degradation products by Hfq in Sinorhizobium meliloti. Biochem Biophys Res Commun (2009) 0.86
Function of the bacteriophytochrome BphP in the RpoS/Las quorum-sensing network of Pseudomonas aeruginosa. Microbiology (2011) 0.85
Structure of the biliverdin cofactor in the Pfr state of bathy and prototypical phytochromes. J Biol Chem (2013) 0.84
A light regulated OmpR-class promoter element co-ordinates light-harvesting protein and chromophore biosynthetic enzyme gene expression. Mol Microbiol (2007) 0.84
Insights into phycoerythrobilin biosynthesis point toward metabolic channeling. J Biol Chem (2006) 0.84
Discovery of cyanophage genomes which contain mitochondrial DNA polymerase. Mol Biol Evol (2011) 0.84
Archaea in the Gulf of Aqaba. FEMS Microbiol Ecol (2009) 0.83
Expression of the phytochrome operon in Pseudomonas aeruginosa is dependent on the alternative sigma factor RpoS. FEMS Microbiol Lett (2008) 0.83
Dinitrogen fixation in a unicellular chlorophyll d-containing cyanobacterium. ISME J (2012) 0.83
Toxin-antitoxin systems on the large defense plasmid pSYSA of Synechocystis sp. PCC 6803. J Biol Chem (2013) 0.83
Phylogenetic analysis of freshwater sponges provide evidence for endemism and radiation in ancient lakes. Mol Phylogenet Evol (2007) 0.82
Synthesis of bisubstrate inhibitors of porphobilinogen synthase from Pseudomonas aeruginosa. Chem Biodivers (2007) 0.81
Structural and mechanistic insight into the ferredoxin-mediated two-electron reduction of bilins. Biochem J (2011) 0.81
Small RNAs of the Bradyrhizobium/Rhodopseudomonas lineage and their analysis. RNA Biol (2012) 0.81
Probing the active site of Pseudomonas aeruginosa porphobilinogen synthase using newly developed inhibitors. Biochemistry (2006) 0.80
Phycobiliproteins in Prochlorococcus marinus: biosynthesis of pigments and their assembly into proteins. Eur J Cell Biol (2010) 0.79
Conserved and variable domains within divergent rnase P RNA gene sequences of Prochlorococcus strains. Int J Syst Evol Microbiol (2002) 0.78
The hierarchy of transition metal homeostasis: iron controls manganese accumulation in a unicellular cyanobacterium. Biochim Biophys Acta (2014) 0.78
The diversity of small non-coding RNAs in the diatom Phaeodactylum tricornutum. BMC Genomics (2014) 0.78
Radical mechanism of cyanophage phycoerythrobilin synthase (PebS). Biochem J (2011) 0.77
A heme-based redox sensor in the methanogenic archaeon Methanosarcina acetivorans. J Biol Chem (2013) 0.77
Inactivation of the conserved open reading frame ycf34 of Synechocystis sp. PCC 6803 interferes with the photosynthetic electron transport chain. Biochim Biophys Acta (2012) 0.77
Complex formation between heme oxygenase and phytochrome during biosynthesis in Pseudomonas syringae pv. tomato. Photochem Photobiol Sci (2012) 0.77
Complete genome determination and analysis of Acholeplasma oculi strain 19L, highlighting the loss of basic genetic features in the Acholeplasmataceae. BMC Genomics (2014) 0.77
Heme oxygenases from Arabidopsis thaliana reveal different mechanisms of carbon monoxide binding. Spectrochim Acta A Mol Biomol Spectrosc (2011) 0.76
Biosynthesis of open-chain tetrapyrroles in Prochlorococcus marinus. FEMS Microbiol Lett (2007) 0.76
Origin and Impact of Nitric Oxide in Pseudomonas aeruginosa Biofilms. J Bacteriol (2016) 0.76
Editorial: RNA in bacteria: biogenesis, regulatory mechanisms and functions. FEMS Microbiol Rev (2015) 0.75
Variable composition of heme oxygenases with different regiospecificities in Pseudomonas species. Arch Microbiol (2012) 0.75
The hybrid histidine kinase Slr1759 of the cyanobacterium Synechocystis sp. PCC 6803 contains FAD at its PAS domain. Arch Microbiol (2009) 0.75
A tightly inducible riboswitch system in Synechocystis sp. PCC 6803. J Gen Appl Microbiol (2016) 0.75
Chromophore composition of the phycobiliprotein Cr-PC577 from the cryptophyte Hemiselmis pacifica. Photosynth Res (2014) 0.75
Enzymatic ring opening of an iron corrole by plant-type heme oxygenases: unexpected substrate and protein selectivities. Biochemistry (2010) 0.75