Published in J Biosci Bioeng on January 01, 2002
Structure-function relationships of the viral RNA-dependent RNA polymerase: fidelity, replication speed, and initiation mechanism determined by a residue in the ribose-binding pocket. J Biol Chem (2007) 1.23
Identification of two forms of Q{beta} replicase with different thermal stabilities but identical RNA replication activity. J Biol Chem (2010) 0.82
Adaptive response of a gene network to environmental changes by fitness-induced attractor selection. PLoS One (2006) 2.30
Universality and flexibility in gene expression from bacteria to human. Proc Natl Acad Sci U S A (2004) 2.03
Impact of olmesartan on progression of coronary atherosclerosis a serial volumetric intravascular ultrasound analysis from the OLIVUS (impact of OLmesarten on progression of coronary atherosclerosis: evaluation by intravascular ultrasound) trial. J Am Coll Cardiol (2010) 1.76
Protein folding by the effects of macromolecular crowding. Protein Sci (2004) 1.71
On the relation between fluctuation and response in biological systems. Proc Natl Acad Sci U S A (2003) 1.70
Time-dependent changes in plasma osteopontin levels in patients with anterior-wall acute myocardial infarction after successful reperfusion: correlation with left-ventricular volume and function. J Lab Clin Med (2005) 1.67
Darwinian evolution in a translation-coupled RNA replication system within a cell-like compartment. Nat Commun (2013) 1.65
Comparison of sequence reads obtained from three next-generation sequencing platforms. PLoS One (2011) 1.63
Importance of parasite RNA species repression for prolonged translation-coupled RNA self-replication. Chem Biol (2012) 1.55
Expression of a cascading genetic network within liposomes. FEBS Lett (2004) 1.30
Femtoliter compartment in liposomes for in vitro selection of proteins. Anal Biochem (2006) 1.27
Replication of genetic information with self-encoded replicase in liposomes. Chembiochem (2008) 1.26
An improved physico-chemical model of hybridization on high-density oligonucleotide microarrays. Bioinformatics (2008) 1.21
Transition from positive to neutral in mutation fixation along with continuing rising fitness in thermal adaptive evolution. PLoS Genet (2010) 1.19
Coupling of the fusion and budding of giant phospholipid vesicles containing macromolecules. Proc Natl Acad Sci U S A (2012) 1.16
Experimental optimization of probe length to increase the sequence specificity of high-density oligonucleotide microarrays. BMC Genomics (2007) 1.15
Reconstitution of DNA strand exchange mediated by Rhp51 recombinase and two mediators. PLoS Biol (2008) 1.14
Transcriptome analysis of parallel-evolved Escherichia coli strains under ethanol stress. BMC Genomics (2010) 1.13
On a kinetic origin of heredity: minority control in a replicating system with mutually catalytic molecules. J Theor Biol (2002) 1.06
Construction of Escherichia coli gene expression level perturbation collection. Metab Eng (2008) 1.05
Population analysis of structural properties of giant liposomes by flow cytometry. Langmuir (2009) 1.04
Sorting of cells of the same size, shape, and cell cycle stage for a single cell level assay without staining. BMC Cell Biol (2006) 1.02
Evolvability of random polypeptides through functional selection within a small library. Protein Eng (2002) 1.02
Conformational change of the actomyosin complex drives the multiple stepping movement. Proc Natl Acad Sci U S A (2002) 1.02
Can an arbitrary sequence evolve towards acquiring a biological function? J Mol Evol (2003) 1.01
In vitro evolution of α-hemolysin using a liposome display. Proc Natl Acad Sci U S A (2013) 1.00
Multilevel comparative analysis of the contributions of genome reduction and heat shock to the Escherichia coli transcriptome. BMC Genomics (2013) 0.98
How selection affects phenotypic fluctuation. Mol Syst Biol (2009) 0.98
Cooperative adaptation to establishment of a synthetic bacterial mutualism. PLoS One (2011) 0.98
Ongoing phenotypic and genomic changes in experimental coevolution of RNA bacteriophage Qβ and Escherichia coli. PLoS Genet (2011) 0.97
Programmed vesicle fusion triggers gene expression. Langmuir (2011) 0.97
Noisy cell growth rate leads to fluctuating protein concentration in bacteria. Phys Biol (2009) 0.96
Experimental rugged fitness landscape in protein sequence space. PLoS One (2006) 0.96
Cell-free protein synthesis inside giant unilamellar vesicles analyzed by flow cytometry. Langmuir (2012) 0.95
Adaptation by stochastic switching of a monostable genetic circuit in Escherichia coli. Mol Syst Biol (2011) 0.95
Size control of giant unilamellar vesicles prepared from inverted emulsion droplets. J Colloid Interface Sci (2012) 0.95
Quantitative study of the structure of multilamellar giant liposomes as a container of protein synthesis reaction. Langmuir (2008) 0.95
Evolution of an arbitrary sequence in solubility. J Mol Evol (2004) 0.95
Nascent chain, mRNA, and ribosome complexes generated by a pure translation system. Biochem Biophys Res Commun (2006) 0.94
In vitro evolution of proteins. J Biosci Bioeng (2006) 0.94
Synthesis of functional proteins within liposomes. Methods Mol Biol (2010) 0.93
Quantification of structural properties of cell-sized individual liposomes by flow cytometry. J Biosci Bioeng (2006) 0.93
Detection of association and fusion of giant vesicles using a fluorescence-activated cell sorter. Langmuir (2010) 0.93
A controllable gene expression system in liposomes that includes a positive feedback loop. Mol Biosyst (2013) 0.92
Refined method for the genomic integration of complex synthetic circuits. J Biosci Bioeng (2010) 0.92
Comprehensive analysis of the effects of Escherichia coli ORFs on protein translation reaction. Mol Cell Proteomics (2008) 0.91
Compensatory evolution of a WW domain variant lacking the strictly conserved Trp residue. J Mol Evol (2007) 0.90
Model-based analysis of non-specific binding for background correction of high-density oligonucleotide microarrays. Bioinformatics (2008) 0.90
Construction of a gene screening system using giant unilamellar liposomes and a fluorescence-activated cell sorter. Anal Chem (2012) 0.88
Quantifying epistatic interactions among the components constituting the protein translation system. Mol Syst Biol (2009) 0.88
Four-year clinical outcomes of the OLIVUS-Ex (impact of Olmesartan on progression of coronary atherosclerosis: evaluation by intravascular ultrasound) extension trial. Atherosclerosis (2011) 0.87
Coronary pressure measurement to determine treatment strategy for equivocal left main coronary artery lesions. Heart Vessels (2005) 0.87
Quantitative analysis of the bacteriophage Qbeta infection cycle. Biochim Biophys Acta (2008) 0.86
Importance of translation-replication balance for efficient replication by the self-encoded replicase. Chembiochem (2008) 0.86
Cellular compartment model for exploring the effect of the lipidic membrane on the kinetics of encapsulated biochemical reactions. Langmuir (2010) 0.85
Hydrodynamic trapping of Tetrahymena thermophila for the long-term monitoring of cell behaviors. Lab Chip (2012) 0.85
In vitro membrane protein synthesis inside cell-sized vesicles reveals the dependence of membrane protein integration on vesicle volume. ACS Synth Biol (2013) 0.85
Functional Qbeta replicase genetically fusing essential subunits EF-Ts and EF-Tu with beta-subunit. J Biosci Bioeng (2006) 0.85
Compartmentalization in a water-in-oil emulsion repressed the spontaneous amplification of RNA by Q beta replicase. Biochemistry (2010) 0.85
Single-cell isolation and cloning of Tetrahymena thermophila cells with a fluorescence-activated cell sorter. J Eukaryot Microbiol (2010) 0.85
Origin of lognormal-like distributions with a common width in a growth and division process. Phys Rev E Stat Nonlin Soft Matter Phys (2011) 0.84
Nutrient-dependent growth defects and mutability of mutators in Escherichia coli. Genes Cells (2014) 0.84
Constructing partial models of cells. Cold Spring Harb Perspect Biol (2010) 0.84
An observation of the initial stage towards a symbiotic relationship. Biosystems (2002) 0.84
Correlation between evolutionary structural development and protein folding. Proc Natl Acad Sci U S A (2005) 0.83
Kinetic model of double-stranded RNA formation during long RNA replication by Qβ replicase. FEBS Lett (2013) 0.83
Directed Evolution of Proteins through In Vitro Protein Synthesis in Liposomes. J Nucleic Acids (2012) 0.83
Gene expression scaled by distance to the genome replication site. Mol Biosyst (2013) 0.83
Stochastic switching induced adaptation in a starved Escherichia coli population. PLoS One (2011) 0.83
Cell-free protein synthesis in a microchamber revealed the presence of an optimum compartment volume for high-order reactions. ACS Synth Biol (2013) 0.83
Nicorandil prevents microvascular dysfunction resulting from PCI in patients with stable angina pectoris: a randomised study. EuroIntervention (2014) 0.82
Extracting characteristic properties of fitness landscape from in vitro molecular evolution: a case study on infectivity of fd phage to E.coli. J Theor Biol (2007) 0.82
Cell-free protein synthesis from a single copy of DNA in a glass microchamber. Lab Chip (2012) 0.82
Kinetic analysis of the entire RNA amplification process by Qbeta replicase. J Biol Chem (2007) 0.82
Identification of two forms of Q{beta} replicase with different thermal stabilities but identical RNA replication activity. J Biol Chem (2010) 0.82
Dynamic change in promoter activation during lysine biosynthesis in Escherichia coli cells. Mol Biosyst (2007) 0.82
Kinetic analysis of β-galactosidase and β-glucuronidase tetramerization coupled with protein translation. J Biol Chem (2011) 0.82
Development of a physical model-based algorithm for the detection of single-nucleotide substitutions by using tiling microarrays. PLoS One (2013) 0.81
Bacterial cells carrying synthetic dual-function operon survived starvation. J Biomed Biotechnol (2011) 0.80
Importance of compartment formation for a self-encoding system. Proc Natl Acad Sci U S A (2002) 0.80
Development of a reporter peptide that catalytically produces a fluorescent signal through α-complementation. Protein Sci (2015) 0.80
Direct visualization of DNA duplex formation on the surface of a giant liposome. Chembiochem (2003) 0.79
Coronary pressure measurement to identify the lesion requiring percutaneous coronary intervention in equivocal tandem lesions. Coron Artery Dis (2006) 0.78
α-Complementation in an artificial genome replication system in liposomes. Chembiochem (2012) 0.78