Published in Plant Cell Physiol on November 23, 2005
Plant hormone jasmonate prioritizes defense over growth by interfering with gibberellin signaling cascade. Proc Natl Acad Sci U S A (2012) 2.34
Molecular interactions of a soluble gibberellin receptor, GID1, with a rice DELLA protein, SLR1, and gibberellin. Plant Cell (2007) 2.14
Highly specific gene silencing by artificial miRNAs in rice. PLoS One (2008) 1.85
Dissecting yield-associated loci in super hybrid rice by resequencing recombinant inbred lines and improving parental genome sequences. Proc Natl Acad Sci U S A (2013) 1.48
The Arabidopsis RING finger E3 ligase RHA2a is a novel positive regulator of abscisic acid signaling during seed germination and early seedling development. Plant Physiol (2009) 1.30
Brassinosteroid regulates cell elongation by modulating gibberellin metabolism in rice. Plant Cell (2014) 1.17
New approach to increasing rice lodging resistance and biomass yield through the use of high gibberellin producing varieties. PLoS One (2014) 1.17
Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice. Plant J (2008) 1.15
Characterization of the beta-carotene hydroxylase gene DSM2 conferring drought and oxidative stress resistance by increasing xanthophylls and abscisic acid synthesis in rice. Plant Physiol (2010) 1.13
Inhibition of tiller bud outgrowth in the tin mutant of wheat is associated with precocious internode development. Plant Physiol (2012) 1.09
DWARF AND LOW-TILLERING acts as a direct downstream target of a GSK3/SHAGGY-like kinase to mediate brassinosteroid responses in rice. Plant Cell (2012) 1.07
High-Resolution Inflorescence Phenotyping Using a Novel Image-Analysis Pipeline, PANorama. Plant Physiol (2014) 1.01
Quantitative Trait Locus (QTL) meta-analysis and comparative genomics for candidate gene prediction in perennial ryegrass (Lolium perenne L.). BMC Genet (2012) 1.01
CYP714B1 and CYP714B2 encode gibberellin 13-oxidases that reduce gibberellin activity in rice. Proc Natl Acad Sci U S A (2013) 0.98
CYTOKININ OXIDASE/DEHYDROGENASE4 Integrates Cytokinin and Auxin Signaling to Control Rice Crown Root Formation. Plant Physiol (2014) 0.94
Dicer-like 3 produces transposable element-associated 24-nt siRNAs that control agricultural traits in rice. Proc Natl Acad Sci U S A (2014) 0.94
Next-generation sequencing-based mRNA and microRNA expression profiling analysis revealed pathways involved in the rapid growth of developing culms in Moso bamboo. BMC Plant Biol (2013) 0.94
Transcriptome sequencing and analysis of the fast growing shoots of moso bamboo (Phyllostachys edulis). PLoS One (2013) 0.88
Genome-wide association and high-resolution phenotyping link Oryza sativa panicle traits to numerous trait-specific QTL clusters. Nat Commun (2016) 0.86
OsGA2ox5, a gibberellin metabolism enzyme, is involved in plant growth, the root gravity response and salt stress. PLoS One (2014) 0.86
Application of resequencing to rice genomics, functional genomics and evolutionary analysis. Rice (N Y) (2014) 0.82
SUI-family genes encode phosphatidylserine synthases and regulate stem development in rice. Planta (2012) 0.78
A fungal endophyte helps plants to tolerate root herbivory through changes in gibberellin and jasmonate signaling. New Phytol (2016) 0.77
Ectopic expression of a cytochrome P450 monooxygenase gene PtCYP714A3 from Populus trichocarpa reduces shoot growth and improves tolerance to salt stress in transgenic rice. Plant Biotechnol J (2016) 0.77
Predicting the size of the progeny mapping population required to positionally clone a gene. Genetics (2007) 0.76
Contrasting Strategies of Alfalfa Stem Elongation in Response to Fall Dormancy in Early Growth Stage: The Tradeoff between Internode Length and Internode Number. PLoS One (2015) 0.75
Gibberellin-Regulation and Genetic Variations in Leaf Elongation for Tall Fescue in Association with Differential Gene Expression Controlling Cell Expansion. Sci Rep (2016) 0.75
Rice HOX12 Regulates Panicle Exsertion by Directly Modulating the Expression of ELONGATED UPPERMOST INTERNODE1. Plant Cell (2016) 0.75
Genome-wide association mapping revealed a diverse genetic basis of seed dormancy across subpopulations in rice (Oryza sativa L.). BMC Genet (2016) 0.75
Gibberellins regulate iron deficiency-response by influencing iron transport and translocation in rice seedlings (Oryza sativa). Ann Bot (2017) 0.75
Genome-wide association studies of 14 agronomic traits in rice landraces. Nat Genet (2010) 8.75
Genome-wide association analysis identifies 13 new risk loci for schizophrenia. Nat Genet (2013) 7.44
Dual functions of Tet1 in transcriptional regulation in mouse embryonic stem cells. Nature (2011) 6.48
High-throughput genotyping by whole-genome resequencing. Genome Res (2009) 5.74
Cytokinin oxidase regulates rice grain production. Science (2005) 5.60
A map of rice genome variation reveals the origin of cultivated rice. Nature (2012) 4.92
Coordinated regulation of Arabidopsis thaliana development by light and gibberellins. Nature (2008) 4.71
Genome-wide association study of flowering time and grain yield traits in a worldwide collection of rice germplasm. Nat Genet (2011) 4.19
Identification of seven loci affecting mean telomere length and their association with disease. Nat Genet (2013) 3.87
Control of tillering in rice. Nature (2003) 3.73
Regulation of OsSPL14 by OsmiR156 defines ideal plant architecture in rice. Nat Genet (2010) 3.56
Natural variation at the DEP1 locus enhances grain yield in rice. Nat Genet (2009) 3.15
Cytoplasmic male sterility of rice with boro II cytoplasm is caused by a cytotoxic peptide and is restored by two related PPR motif genes via distinct modes of mRNA silencing. Plant Cell (2006) 2.91
Optimizing de novo transcriptome assembly from short-read RNA-Seq data: a comparative study. BMC Bioinformatics (2011) 2.88
Draft genome of the wheat A-genome progenitor Triticum urartu. Nature (2013) 2.86
Gibberellin regulates Arabidopsis floral development via suppression of DELLA protein function. Development (2004) 2.75
The rice tapetum degeneration retardation gene is required for tapetum degradation and anther development. Plant Cell (2006) 2.62
Control of grain size, shape and quality by OsSPL16 in rice. Nat Genet (2012) 2.58
A powerful and flexible approach to the analysis of RNA sequence count data. Bioinformatics (2011) 2.49
LAZY1 controls rice shoot gravitropism through regulating polar auxin transport. Cell Res (2007) 2.43
BRITTLE CULM1, which encodes a COBRA-like protein, affects the mechanical properties of rice plants. Plant Cell (2003) 2.19
Allelic diversities in rice starch biosynthesis lead to a diverse array of rice eating and cooking qualities. Proc Natl Acad Sci U S A (2009) 2.19
Genetic control of rice plant architecture under domestication. Nat Genet (2008) 2.17
DWARF27, an iron-containing protein required for the biosynthesis of strigolactones, regulates rice tiller bud outgrowth. Plant Cell (2009) 2.00
DELLAs contribute to plant photomorphogenesis. Plant Physiol (2007) 1.97
Phosphate starvation root architecture and anthocyanin accumulation responses are modulated by the gibberellin-DELLA signaling pathway in Arabidopsis. Plant Physiol (2007) 1.86
Control of petal shape and floral zygomorphy in Lotus japonicus. Proc Natl Acad Sci U S A (2006) 1.78
Loss of function of OsDCL1 affects microRNA accumulation and causes developmental defects in rice. Plant Physiol (2005) 1.77
OsWRKY71, a rice transcription factor, is involved in rice defense response. J Plant Physiol (2006) 1.73
Hic-5 regulates an epithelial program mediated by PPARgamma. Genes Dev (2005) 1.73
Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice. Proc Natl Acad Sci U S A (2012) 1.70
A modular network model of aging. Mol Syst Biol (2007) 1.68
Insights into salt tolerance from the genome of Thellungiella salsuginea. Proc Natl Acad Sci U S A (2012) 1.62
Mutation of the rice Narrow leaf1 gene, which encodes a novel protein, affects vein patterning and polar auxin transport. Plant Physiol (2008) 1.54
ERCC2/XPD Lys751Gln and Asp312Asn gene polymorphism and lung cancer risk: a meta-analysis involving 22 case-control studies. J Thorac Oncol (2010) 1.51
Butyrate promotes induced pluripotent stem cell generation. J Biol Chem (2010) 1.48
Biochemical insights on degradation of Arabidopsis DELLA proteins gained from a cell-free assay system. Plant Cell (2009) 1.48
Dissecting yield-associated loci in super hybrid rice by resequencing recombinant inbred lines and improving parental genome sequences. Proc Natl Acad Sci U S A (2013) 1.48
Overexpression of a rice OsDREB1F gene increases salt, drought, and low temperature tolerance in both Arabidopsis and rice. Plant Mol Biol (2008) 1.43
Roles of DCL4 and DCL3b in rice phased small RNA biogenesis. Plant J (2011) 1.42
Genetic and genomic evidence that sucrose is a global regulator of plant responses to phosphate starvation in Arabidopsis. Plant Physiol (2011) 1.42
Complete sequence determination of a novel reptile iridovirus isolated from soft-shelled turtle and evolutionary analysis of Iridoviridae. BMC Genomics (2009) 1.40
SDG714, a histone H3K9 methyltransferase, is involved in Tos17 DNA methylation and transposition in rice. Plant Cell (2007) 1.39
DWARF AND LOW-TILLERING, a new member of the GRAS family, plays positive roles in brassinosteroid signaling in rice. Plant J (2009) 1.38
The pea TCP transcription factor PsBRC1 acts downstream of Strigolactones to control shoot branching. Plant Physiol (2011) 1.38
A phylogenomic investigation of CYCLOIDEA-like TCP genes in the Leguminosae. Plant Physiol (2003) 1.38
Relationship between admission blood glucose level and prognosis in elderly patients without previously known diabetes who undergo emergency non-cardiac surgery. Intern Emerg Med (2015) 1.38
Population-based in vitro hazard and concentration-response assessment of chemicals: the 1000 genomes high-throughput screening study. Environ Health Perspect (2015) 1.37
Genome-wide uH2A localization analysis highlights Bmi1-dependent deposition of the mark at repressed genes. PLoS Genet (2009) 1.36
LEAF TIP NECROSIS1 plays a pivotal role in the regulation of multiple phosphate starvation responses in rice. Plant Physiol (2011) 1.35
Mapping 49 quantitative trait loci at high resolution through sequencing-based genotyping of rice recombinant inbred lines. Theor Appl Genet (2010) 1.34
GOLD HULL AND INTERNODE2 encodes a primarily multifunctional cinnamyl-alcohol dehydrogenase in rice. Plant Physiol (2006) 1.32
The floral organ number4 gene encoding a putative ortholog of Arabidopsis CLAVATA3 regulates apical meristem size in rice. Plant Physiol (2006) 1.31
Oryza sativa dicer-like4 reveals a key role for small interfering RNA silencing in plant development. Plant Cell (2007) 1.30
Identification and expression analysis of miRNAs from nitrogen-fixing soybean nodules. Biochem Biophys Res Commun (2008) 1.30
Dwarf 88, a novel putative esterase gene affecting architecture of rice plant. Plant Mol Biol (2009) 1.29
Short panicle1 encodes a putative PTR family transporter and determines rice panicle size. Plant J (2009) 1.29
Genetic control of floral zygomorphy in pea (Pisum sativum L.). Proc Natl Acad Sci U S A (2008) 1.27
Genome-wide mapping of SMAD target genes reveals the role of BMP signaling in embryonic stem cell fate determination. Genome Res (2009) 1.27
The Arabidopsis mediator subunit MED25 differentially regulates jasmonate and abscisic acid signaling through interacting with the MYC2 and ABI5 transcription factors. Plant Cell (2012) 1.27
BC10, a DUF266-containing and Golgi-located type II membrane protein, is required for cell-wall biosynthesis in rice (Oryza sativa L.). Plant J (2008) 1.25
Independent losses of function in a polyphenol oxidase in rice: differentiation in grain discoloration between subspecies and the role of positive selection under domestication. Plant Cell (2008) 1.24
SHALLOT-LIKE1 is a KANADI transcription factor that modulates rice leaf rolling by regulating leaf abaxial cell development. Plant Cell (2009) 1.24
Genetic control of a transition from black to straw-white seed hull in rice domestication. Plant Physiol (2011) 1.22
RETARDED PALEA1 controls palea development and floral zygomorphy in rice. Plant Physiol (2008) 1.22
Monitoring genome-wide changes in gene expression in response to endogenous cytokinin reveals targets in Arabidopsis thaliana. FEBS Lett (2003) 1.22
Map-based cloning of the ALK gene, which controls the gelatinization temperature of rice. Sci China C Life Sci (2003) 1.21
Roles of OsCKI1, a rice casein kinase I, in root development and plant hormone sensitivity. Plant J (2003) 1.21
The plant-specific G protein γ subunit AGG3 influences organ size and shape in Arabidopsis thaliana. New Phytol (2012) 1.19
Identification and characterization of NARROW AND ROLLED LEAF 1, a novel gene regulating leaf morphology and plant architecture in rice. Plant Mol Biol (2010) 1.19
miR-150 promotes human breast cancer growth and malignant behavior by targeting the pro-apoptotic purinergic P2X7 receptor. PLoS One (2013) 1.18
The redox switch: dynamic regulation of protein function by cysteine modifications. Physiol Plant (2009) 1.17
Nitric oxide and protein S-nitrosylation are integral to hydrogen peroxide-induced leaf cell death in rice. Plant Physiol (2011) 1.16
Gene therapy following subretinal AAV5 vector delivery is not affected by a previous intravitreal AAV5 vector administration in the partner eye. Mol Vis (2009) 1.16
Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice. Plant J (2008) 1.15
Predictive value of ERCC1 and XPD polymorphism in patients with advanced non-small cell lung cancer receiving platinum-based chemotherapy: a systematic review and meta-analysis. Med Oncol (2010) 1.14
Nitric oxide function and signalling in plant disease resistance. J Exp Bot (2007) 1.14