Published in Curr Opin Plant Biol on February 03, 2006
A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species. PLoS One (2011) 15.19
Maize inbreds exhibit high levels of copy number variation (CNV) and presence/absence variation (PAV) in genome content. PLoS Genet (2009) 3.88
A large maize (Zea mays L.) SNP genotyping array: development and germplasm genotyping, and genetic mapping to compare with the B73 reference genome. PLoS One (2011) 3.30
AgBase: a unified resource for functional analysis in agriculture. Nucleic Acids Res (2006) 2.92
Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor. Genome Res (2010) 2.71
Genome-wide and organ-specific landscapes of epigenetic modifications and their relationships to mRNA and small RNA transcriptomes in maize. Plant Cell (2009) 2.39
Epigenetic and genetic influences on DNA methylation variation in maize populations. Plant Cell (2013) 1.83
Transcript profiling by 3'-untranslated region sequencing resolves expression of gene families. Plant Physiol (2007) 1.78
Heritable epigenetic variation among maize inbreds. PLoS Genet (2011) 1.54
Gene expression analyses in maize inbreds and hybrids with varying levels of heterosis. BMC Plant Biol (2008) 1.51
Digital gene expression signatures for maize development. Plant Physiol (2010) 1.49
Deep sampling of the Palomero maize transcriptome by a high throughput strategy of pyrosequencing. BMC Genomics (2009) 1.41
Allele-specific expression patterns reveal biases and embryo-specific parent-of-origin effects in hybrid maize. Plant Cell (2007) 1.39
Genome size and GC content evolution of Festuca: ancestral expansion and subsequent reduction. Ann Bot (2007) 1.28
Repeat associated small RNAs vary among parents and following hybridization in maize. Proc Natl Acad Sci U S A (2012) 1.26
Characterization of paralogous protein families in rice. BMC Plant Biol (2008) 1.19
Transposon insertion site profiling chip (TIP-chip). Proc Natl Acad Sci U S A (2006) 1.14
Overexpression of the epidermis-specific homeodomain-leucine zipper IV transcription factor Outer Cell Layer1 in maize identifies target genes involved in lipid metabolism and cuticle biosynthesis. Plant Physiol (2010) 1.11
Genomic distribution of H3K9me2 and DNA methylation in a maize genome. PLoS One (2014) 1.03
Involvement of the MADS-box gene ZMM4 in floral induction and inflorescence development in maize. Plant Physiol (2008) 1.01
PPR2263, a DYW-Subgroup Pentatricopeptide repeat protein, is required for mitochondrial nad5 and cob transcript editing, mitochondrion biogenesis, and maize growth. Plant Cell (2012) 1.00
Fine mapping and haplotype structure analysis of a major flowering time quantitative trait locus on maize chromosome 10. Genetics (2009) 1.00
Comprehensive analysis of imprinted genes in maize reveals allelic variation for imprinting and limited conservation with other species. Proc Natl Acad Sci U S A (2013) 0.94
Highly asymmetric rice genomes. BMC Genomics (2007) 0.89
Spatial configuration of transposable element Ac termini affects their ability to induce chromosomal breakage in maize. Plant Cell (2010) 0.88
Methylation-sensitive linking libraries enhance gene-enriched sequencing of complex genomes and map DNA methylation domains. BMC Genomics (2008) 0.88
European flint landraces grown in situ reveal adaptive introgression from modern maize. PLoS One (2015) 0.84
Integrated cytogenetic map of mitotic metaphase chromosome 9 of maize: resolution, sensitivity, and banding paint development. Chromosoma (2008) 0.84
PPR8522 encodes a chloroplast-targeted pentatricopeptide repeat protein necessary for maize embryogenesis and vegetative development. J Exp Bot (2012) 0.83
Display of a maize cDNA library on baculovirus infected insect cells. BMC Biotechnol (2008) 0.81
Recent proliferation and translocation of pollen group 1 allergen genes in the maize genome. Plant Physiol (2007) 0.81
Randomly detected genetically modified (GM) maize (Zea mays L.) near a transport route revealed a fragile 45S rDNA phenotype. PLoS One (2013) 0.79
Transposons that clean up after themselves. Genome Biol (2009) 0.78
Variable Level of Dominance of Candidate Genes Controlling Drought Functional Traits in Maize Hybrids. Front Plant Sci (2017) 0.75
Genomic localization of AtRE1 and AtRE2, copia-type retrotransposons, in natural variants of Arabidopsis thaliana. Mol Genet Genomics (2014) 0.75
Intraspecific violation of genetic colinearity and its implications in maize. Proc Natl Acad Sci U S A (2002) 5.85
Gene movement by Helitron transposons contributes to the haplotype variability of maize. Proc Natl Acad Sci U S A (2005) 3.13
Recombination rates between adjacent genic and retrotransposon regions in maize vary by 2 orders of magnitude. Proc Natl Acad Sci U S A (2002) 2.69
Remarkable variation in maize genome structure inferred from haplotype diversity at the bz locus. Proc Natl Acad Sci U S A (2006) 2.20
Use of the transposon Ac as a gene-searching engine in the maize genome. Plant Cell (2002) 1.55
The polychromatic Helitron landscape of the maize genome. Proc Natl Acad Sci U S A (2009) 1.37
Computational prediction and molecular confirmation of Helitron transposons in the maize genome. BMC Genomics (2008) 1.19
Haplotype structure strongly affects recombination in a maize genetic interval polymorphic for Helitron and retrotransposon insertions. Proc Natl Acad Sci U S A (2009) 1.12
Jittery, a Mutator distant relative with a paradoxical mobile behavior: excision without reinsertion. Plant Cell (2004) 1.07
Macrotransposition and other complex chromosomal restructuring in maize by closely linked transposons in direct orientation. Plant Cell (2008) 1.06
A mutation in the nuclear-encoded plastid ribosomal protein S9 leads to early embryo lethality in maize. Plant J (2004) 0.96
Excision of Helitron transposons in maize. Genetics (2009) 0.95
The maize aberrant pollen transmission 1 gene is a SABRE/KIP homolog required for pollen tube growth. Genetics (2005) 0.95
Characterization of the monoterpene synthase gene tps26, the ortholog of a gene induced by insect herbivory in maize. Plant Physiol (2008) 0.86
The maize high-lysine mutant opaque7 is defective in an acyl-CoA synthetase-like protein. Genetics (2011) 0.86
The complete Ac/Ds transposon family of maize. BMC Genomics (2011) 0.86
Gene tagging with engineered Ds elements in maize. Methods Mol Biol (2013) 0.84
TED, an autonomous and rare maize transposon of the mutator superfamily with a high gametophytic excision frequency. Plant Cell (2013) 0.79
Dynamic evolution of bz orthologous regions in the Andropogoneae and other grasses. Plant J (2012) 0.78
Mx-rMx, a family of interacting transposons in the growing hAT superfamily of maize. Plant Cell (2005) 0.78
The spectrum and frequency of self-inflicted and host gene mutations produced by the transposon Ac in maize. Plant Cell (2012) 0.78
InsertionMapper: a pipeline tool for the identification of targeted sequences from multidimensional high throughput sequencing data. BMC Genomics (2013) 0.77
Variation in allelic expression associated with a recombination hotspot in Zea mays. Plant J (2014) 0.76
Visualizing bz1 missense suppression in Zea mays: an assay for monocot tRNA expression and utilization. Plant Mol Biol (2006) 0.75