Published in BMC Bioinformatics on April 11, 2006
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Naked corals: skeleton loss in Scleractinia. Proc Natl Acad Sci U S A (2006) 1.94
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Complete plastid genome sequences of Drimys, Liriodendron, and Piper: implications for the phylogenetic relationships of magnoliids. BMC Evol Biol (2006) 1.46
The complete mitochondrial genome sequence of the spider Habronattus oregonensis reveals rearranged and extremely truncated tRNAs. Mol Biol Evol (2004) 1.42
Implications of the plastid genome sequence of typha (typhaceae, poales) for understanding genome evolution in poaceae. J Mol Evol (2010) 1.41
Complete plastid genome sequences suggest strong selection for retention of photosynthetic genes in the parasitic plant genus Cuscuta. BMC Plant Biol (2007) 1.38
Genome-wide analyses of Geraniaceae plastid DNA reveal unprecedented patterns of increased nucleotide substitutions. Proc Natl Acad Sci U S A (2008) 1.36
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The mitochondrial genome of Paraspadella gotoi is highly reduced and reveals that chaetognaths are a sister group to protostomes. Proc Natl Acad Sci U S A (2004) 1.28
Molecular mechanisms of extensive mitochondrial gene rearrangement in plethodontid salamanders. Mol Biol Evol (2005) 1.23
The first complete chloroplast genome sequence of a lycophyte, Huperzia lucidula (Lycopodiaceae). Gene (2005) 1.22
Functional gene losses occur with minimal size reduction in the plastid genome of the parasitic liverwort Aneura mirabilis. Mol Biol Evol (2007) 1.21
Mitochondrial genome data support the basal position of Acoelomorpha and the polyphyly of the Platyhelminthes. Mol Phylogenet Evol (2004) 1.19
Parallel evolution of truncated transfer RNA genes in arachnid mitochondrial genomes. Mol Biol Evol (2008) 1.16
Complete plastome sequences of Equisetum arvense and Isoetes flaccida: implications for phylogeny and plastid genome evolution of early land plant lineages. BMC Evol Biol (2010) 1.15
High divergence across the whole mitochondrial genome in the "pan-Antarctic" springtail Friesea grisea: evidence for cryptic species? Gene (2009) 1.14
The complete plastid genome sequence of Welwitschia mirabilis: an unusually compact plastome with accelerated divergence rates. BMC Evol Biol (2008) 1.12
Group II introns break new boundaries: presence in a bilaterian's genome. PLoS One (2008) 1.10
Comparative phylogenomic analyses of teleost fish Hox gene clusters: lessons from the cichlid fish Astatotilapia burtoni. BMC Genomics (2007) 1.09
Phylogenetic relationships among amphisbaenian reptiles based on complete mitochondrial genomic sequences. Mol Phylogenet Evol (2004) 1.06
Systematics and plastid genome evolution of the cryptically photosynthetic parasitic plant genus Cuscuta (Convolvulaceae). BMC Biol (2007) 1.05
Arachnid relationships based on mitochondrial genomes: asymmetric nucleotide and amino acid bias affects phylogenetic analyses. Mol Phylogenet Evol (2008) 1.04
Parallel loss of plastid introns and their maturase in the genus Cuscuta. PLoS One (2009) 1.02
The mitochondrial genome of Phoronis architecta--comparisons demonstrate that phoronids are lophotrochozoan protostomes. Mol Biol Evol (2003) 1.01
The mitochondrial genome of the entomophagous endoparasite Xenos vesparum (Insecta: Strepsiptera). Gene (2006) 1.00
Using partial genomic fosmid libraries for sequencing complete organellar genomes. Biotechniques (2006) 0.99
Molecular evolution and recombination in gender-associated mitochondrial DNAs of the Manila clam Tapes philippinarum. Genetics (2003) 0.99
Lophotrochozoan mitochondrial genomes. Integr Comp Biol (2006) 0.97
Sessile snails, dynamic genomes: gene rearrangements within the mitochondrial genome of a family of caenogastropod molluscs. BMC Genomics (2010) 0.96
Chloroplast genome sequence of the moss Tortula ruralis: gene content, polymorphism, and structural arrangement relative to other green plant chloroplast genomes. BMC Genomics (2010) 0.94
The complete mitochondrial genome of the enigmatic bigheaded turtle (Platysternon): description of unusual genomic features and the reconciliation of phylogenetic hypotheses based on mitochondrial and nuclear DNA. BMC Evol Biol (2006) 0.94
Evolutionary history of novel genes on the tammar wallaby Y chromosome: Implications for sex chromosome evolution. Genome Res (2011) 0.90
Analysis of the complete mitochondrial genome sequences of the soybean rust pathogens phakopsora pachyrhizi and p. meibomiae. Mycologia (2010) 0.89
Mitochondrial genome sequences and comparative genomics of Phytophthora ramorum and P. sojae. Curr Genet (2007) 0.88
Multiple origins and rapid evolution of duplicated mitochondrial genes in parthenogenetic geckos (Heteronotia binoei; Squamata, Gekkonidae). Mol Biol Evol (2007) 0.88
Genomic analysis of a sexually-selected character: EST sequencing and microarray analysis of eye-antennal imaginal discs in the stalk-eyed fly Teleopsis dalmanni (Diopsidae). BMC Genomics (2009) 0.84
Divergence in cis-regulatory sequences surrounding the opsin gene arrays of African cichlid fishes. BMC Evol Biol (2011) 0.82
Genome size, cell size, and the evolution of enucleated erythrocytes in attenuate salamanders. Zoology (Jena) (2008) 0.81
Extensive variation in nuclear mitochondrial DNA content between the genomes of Phytophthora sojae and Phytophthora ramorum. Mol Plant Microbe Interact (2006) 0.77
Organellar genomes of the four-toothed moss, Tetraphis pellucida. BMC Genomics (2014) 0.76
Initial Sequence and Protein Modeling Results of a Mitochondrial Genome Project on Understudied Invertebrate Phyla. Biol Bull (2004) 0.75
The complete mitochondrial genome of a gecko and the phylogenetic position of the Middle Eastern Teratoscincus keyserlingii. Mol Phylogenet Evol (2005) 0.75
Development of simple sequence repeat markers for the soybean rust fungus, Phakopsora pachyrhizi. Mol Ecol Resour (2008) 0.75