Published in Mol Biol Evol on May 04, 2006
Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature (2012) 5.67
Characterization of polyploid wheat genomic diversity using a high-density 90,000 single nucleotide polymorphism array. Plant Biotechnol J (2014) 4.02
Genome plasticity a key factor in the success of polyploid wheat under domestication. Science (2007) 3.69
Megabase level sequencing reveals contrasted organization and evolution patterns of the wheat gene and transposable element spaces. Plant Cell (2010) 2.45
A genetic framework for grain size and shape variation in wheat. Plant Cell (2010) 2.06
Combining SNP discovery from next-generation sequencing data with bulked segregant analysis (BSA) to fine-map genes in polyploid wheat. BMC Plant Biol (2012) 1.88
Targeted analysis of nucleotide and copy number variation by exon capture in allotetraploid wheat genome. Genome Biol (2011) 1.54
Acc homoeoloci and the evolution of wheat genomes. Proc Natl Acad Sci U S A (2008) 1.53
Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics (2010) 1.41
Effect of the down-regulation of the high Grain Protein Content (GPC) genes on the wheat transcriptome during monocarpic senescence. BMC Genomics (2011) 1.33
Genetic and molecular characterization of the VRN2 loci in tetraploid wheat. Plant Physiol (2008) 1.30
New insights into the origin of the B genome of hexaploid wheat: evolutionary relationships at the SPA genomic region with the S genome of the diploid relative Aegilops speltoides. BMC Genomics (2008) 1.26
Dynamics and differential proliferation of transposable elements during the evolution of the B and A genomes of wheat. Genetics (2008) 1.24
Comparative analysis of syntenic genes in grass genomes reveals accelerated rates of gene structure and coding sequence evolution in polyploid wheat. Plant Physiol (2012) 1.19
Genetic Diversity and Population Structure of Tetraploid Wheats (Triticum turgidum L.) Estimated by SSR, DArT and Pedigree Data. PLoS One (2013) 1.19
A haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes. Genome Biol (2015) 1.14
Genetic analysis of wheat domestication and evolution under domestication. J Exp Bot (2011) 1.09
Small RNAs, DNA methylation and transposable elements in wheat. BMC Genomics (2010) 1.08
Duplication and partitioning in evolution and function of homoeologous Q loci governing domestication characters in polyploid wheat. Proc Natl Acad Sci U S A (2011) 1.01
Feasibility of physical map construction from fingerprinted bacterial artificial chromosome libraries of polyploid plant species. BMC Genomics (2010) 0.97
Contrasting rates of evolution in Pm3 loci from three wheat species and rice. Genetics (2007) 0.92
Comparative analysis of protein-protein interactions in the defense response of rice and wheat. BMC Genomics (2013) 0.89
The impact of Ty3-gypsy group LTR retrotransposons Fatima on B-genome specificity of polyploid wheats. BMC Plant Biol (2011) 0.82
Transcriptome profiling of wheat glumes in wild emmer, hulled landraces and modern cultivars. BMC Genomics (2015) 0.81
The physical map of wheat chromosome 5DS revealed gene duplications and small rearrangements. BMC Genomics (2015) 0.81
A highly conserved gene island of three genes on chromosome 3B of hexaploid wheat: diverse gene function and genomic structure maintained in a tightly linked block. BMC Plant Biol (2010) 0.81
Dynamic evolution of NBS-LRR genes in bread wheat and its progenitors. Mol Genet Genomics (2014) 0.81
Metabolite profiling of a diverse collection of wheat lines using ultraperformance liquid chromatography coupled with time-of-flight mass spectrometry. PLoS One (2012) 0.81
Intraspecific Polymorphisms of Cytogenetic Markers Mapped on Chromosomes of Triticum polonicum L. PLoS One (2016) 0.80
Exploring the diploid wheat ancestral A genome through sequence comparison at the high-molecular-weight glutenin locus region. Mol Genet Genomics (2012) 0.79
Characterization and Expression Analysis of Phytoene Synthase from Bread Wheat (Triticum aestivum L.). PLoS One (2016) 0.75
Analysis of wheat microspore embryogenesis induction by transcriptome and small RNA sequencing using the highly responsive cultivar "Svilena". BMC Plant Biol (2016) 0.75
Untangling nucleotide diversity and evolution of the H genome in polyploid Hordeum and Elymus species based on the single copy of nuclear gene DMC1. PLoS One (2012) 0.75
Characterization of a Wheat Breeders' Array suitable for high-throughput SNP genotyping of global accessions of hexaploid bread wheat (Triticum aestivum). Plant Biotechnol J (2016) 0.75
Wheat Landrace Genome Diversity. Genetics (2017) 0.75
Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature (2012) 5.67
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus). Nature (2008) 5.54
BatchPrimer3: a high throughput web application for PCR and sequencing primer design. BMC Bioinformatics (2008) 5.24
Characterization of polyploid wheat genomic diversity using a high-density 90,000 single nucleotide polymorphism array. Plant Biotechnol J (2014) 4.02
Comparative DNA sequence analysis of wheat and rice genomes. Genome Res (2003) 3.63
Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nat Biotechnol (2013) 3.41
Draft genome of the wheat A-genome progenitor Triticum urartu. Nature (2013) 2.86
Aegilops tauschii single nucleotide polymorphisms shed light on the origins of wheat D-genome genetic diversity and pinpoint the geographic origin of hexaploid wheat. New Phytol (2013) 2.07
The nuclear genome of Brachypodium distachyon: analysis of BAC end sequences. Funct Integr Genomics (2007) 1.97
Annotation-based genome-wide SNP discovery in the large and complex Aegilops tauschii genome using next-generation sequencing without a reference genome sequence. BMC Genomics (2011) 1.88
Construction and characterization of two BAC libraries from Brachypodium distachyon, a new model for grass genomics. Genome (2006) 1.77
A 4-gigabase physical map unlocks the structure and evolution of the complex genome of Aegilops tauschii, the wheat D-genome progenitor. Proc Natl Acad Sci U S A (2013) 1.70
Tempos of gene locus deletions and duplications and their relationship to recombination rate during diploid and polyploid evolution in the Aegilops-Triticum alliance. Genetics (2005) 1.67
Population- and genome-specific patterns of linkage disequilibrium and SNP variation in spring and winter wheat (Triticum aestivum L.). BMC Genomics (2010) 1.62
Targeted analysis of nucleotide and copy number variation by exon capture in allotetraploid wheat genome. Genome Biol (2011) 1.54
Rapid genome mapping in nanochannel arrays for highly complete and accurate de novo sequence assembly of the complex Aegilops tauschii genome. PLoS One (2013) 1.44
Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics (2010) 1.41
Barley whole exome capture: a tool for genomic research in the genus Hordeum and beyond. Plant J (2013) 1.34
GenoProfiler: batch processing of high-throughput capillary fingerprinting data. Bioinformatics (2006) 1.32
Sequence polymorphism in polyploid wheat and their d-genome diploid ancestor. Genetics (2004) 1.30
A BAC-based physical map of Brachypodium distachyon and its comparative analysis with rice and wheat. BMC Genomics (2009) 1.30
Deletion polymorphism in wheat chromosome regions with contrasting recombination rates. Genetics (2004) 1.28
A first generation integrated map of the rainbow trout genome. BMC Genomics (2011) 1.23
Structural characterization of Brachypodium genome and its syntenic relationship with rice and wheat. Plant Mol Biol (2009) 1.22
Comparison of a high-density genetic linkage map to genome features in the model grass Brachypodium distachyon. Theor Appl Genet (2011) 1.20
A first generation BAC-based physical map of the rainbow trout genome. BMC Genomics (2009) 1.20
Homoeolog-specific transcriptional bias in allopolyploid wheat. BMC Genomics (2010) 1.18
PIECE: a database for plant gene structure comparison and evolution. Nucleic Acids Res (2012) 1.10
A high-throughput strategy for screening of bacterial artificial chromosome libraries and anchoring of clones on a genetic map constructed with single nucleotide polymorphisms. BMC Genomics (2009) 1.08
A physical map of the papaya genome with integrated genetic map and genome sequence. BMC Genomics (2009) 1.08
Efficacy of clone fingerprinting methodologies. Genomics (2006) 1.08
A second generation integrated map of the rainbow trout (Oncorhynchus mykiss) genome: analysis of conserved synteny with model fish genomes. Mar Biotechnol (NY) (2011) 1.06
Rapid development of PCR-based genome-specific repetitive DNA junction markers in wheat. Genome (2009) 1.01
Genetic diversity revealed by single nucleotide polymorphism markers in a worldwide germplasm collection of durum wheat. Int J Mol Sci (2013) 1.00
BAC libraries from wheat chromosome 7D: efficient tool for positional cloning of aphid resistance genes. J Biomed Biotechnol (2010) 1.00
RJPrimers: unique transposable element insertion junction discovery and PCR primer design for marker development. Nucleic Acids Res (2010) 0.95
Integrated physical, genetic and genome map of chickpea (Cicer arietinum L.). Funct Integr Genomics (2014) 0.92
Fine mapping of the Bsr1 barley stripe mosaic virus resistance gene in the model grass Brachypodium distachyon. PLoS One (2012) 0.92
Combinatorial pooling enables selective sequencing of the barley gene space. PLoS Comput Biol (2013) 0.88
A new implementation of high-throughput five-dimensional clone pooling strategy for BAC library screening. BMC Genomics (2010) 0.88
Recent emergence of the wheat Lr34 multi-pathogen resistance: insights from haplotype analysis in wheat, rice, sorghum and Aegilops tauschii. Theor Appl Genet (2012) 0.88
Comparative genetic maps reveal extreme crossover localization in the Aegilops speltoides chromosomes. Theor Appl Genet (2005) 0.87
The origin of spelt and free-threshing hexaploid wheat. J Hered (2012) 0.86
Insular organization of gene space in grass genomes. PLoS One (2013) 0.85
Identification and utilization of a sow thistle powdery mildew as a poorly adapted pathogen to dissect post-invasion non-host resistance mechanisms in Arabidopsis. J Exp Bot (2010) 0.85
Physical mapping resources for large plant genomes: radiation hybrids for wheat D-genome progenitor Aegilops tauschii. BMC Genomics (2012) 0.84
SNP-revealed genetic diversity in wild emmer wheat correlates with ecological factors. BMC Evol Biol (2013) 0.84
Ecotypes of an ecologically dominant prairie grass (Andropogon gerardii) exhibit genetic divergence across the U.S. Midwest grasslands' environmental gradient. Mol Ecol (2014) 0.82
Characterizing the walnut genome through analyses of BAC end sequences. Plant Mol Biol (2011) 0.82
Fine genetic mapping of greenbug aphid-resistance gene Gb3 in Aegilops tauschii. Theor Appl Genet (2011) 0.82
PAPP2C interacts with the atypical disease resistance protein RPW8.2 and negatively regulates salicylic acid-dependent defense responses in Arabidopsis. Mol Plant (2012) 0.81
Genome-wide SNP discovery in walnut with an AGSNP pipeline updated for SNP discovery in allogamous organisms. BMC Genomics (2012) 0.81
Physical mapping of a large plant genome using global high-information-content-fingerprinting: the distal region of the wheat ancestor Aegilops tauschii chromosome 3DS. BMC Genomics (2010) 0.80
A radiation hybrid map of chromosome 1D reveals synteny conservation at a wheat speciation locus. Funct Integr Genomics (2013) 0.80
Exploring the diploid wheat ancestral A genome through sequence comparison at the high-molecular-weight glutenin locus region. Mol Genet Genomics (2012) 0.79
Genetic and physical mapping of powdery mildew resistance gene MlHLT in Chinese wheat landrace Hulutou. Theor Appl Genet (2014) 0.79
Identification of a robust molecular marker for the detection of the stem rust resistance gene Sr45 in common wheat. Theor Appl Genet (2014) 0.78
Wheat Zapper: a flexible online tool for colinearity studies in grass genomes. Funct Integr Genomics (2013) 0.77
Saturation and comparative mapping of the genomic region harboring Hessian fly resistance gene H26 in wheat. Theor Appl Genet (2009) 0.76
Chromosomal genomics facilitates fine mapping of a Russian wheat aphid resistance gene. Theor Appl Genet (2015) 0.75
Dynamic evolution of resistance gene analogs in the orthologous genomic regions of powdery mildew resistance gene MlIW170 in Triticum dicoccoides and Aegilops tauschii. Theor Appl Genet (2015) 0.75