Published in New Phytol on February 04, 2013
Characterization of polyploid wheat genomic diversity using a high-density 90,000 single nucleotide polymorphism array. Plant Biotechnol J (2014) 4.02
A 4-gigabase physical map unlocks the structure and evolution of the complex genome of Aegilops tauschii, the wheat D-genome progenitor. Proc Natl Acad Sci U S A (2013) 1.70
A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome. Genome Biol (2015) 1.38
An SNP-based saturated genetic map and QTL analysis of fruit-related traits in cucumber using specific-length amplified fragment (SLAF) sequencing. BMC Genomics (2014) 1.31
A haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes. Genome Biol (2015) 1.14
A genome-wide association study of resistance to stripe rust (Puccinia striiformis f. sp. tritici) in a worldwide collection of hexaploid spring wheat (Triticum aestivum L.). G3 (Bethesda) (2015) 1.05
Identification of the VERNALIZATION 4 gene reveals the origin of spring growth habit in ancient wheats from South Asia. Proc Natl Acad Sci U S A (2015) 0.97
SNP Discovery for mapping alien introgressions in wheat. BMC Genomics (2014) 0.96
Genetic basis for spontaneous hybrid genome doubling during allopolyploid speciation of common wheat shown by natural variation analyses of the paternal species. PLoS One (2013) 0.94
Wheat miRNA ancestors: evident by transcriptome analysis of A, B, and D genome donors. Funct Integr Genomics (2016) 0.90
Genome-wide association mapping for seedling and adult plant resistance to stripe rust in synthetic hexaploid wheat. PLoS One (2014) 0.90
Identification of quantitative trait loci controlling grain size and shape in the D genome of synthetic hexaploid wheat lines. Breed Sci (2013) 0.88
Genetic Architecture of Resistance to Stripe Rust in a Global Winter Wheat Germplasm Collection. G3 (Bethesda) (2016) 0.83
A large-scale chromosome-specific SNP discovery guideline. Funct Integr Genomics (2016) 0.83
High-density genetic linkage map construction and QTL mapping of grain shape and size in the wheat population Yanda1817 × Beinong6. PLoS One (2015) 0.83
Fine physical and genetic mapping of powdery mildew resistance gene MlIW172 originating from wild emmer (Triticum dicoccoides). PLoS One (2014) 0.82
The cuticular wax inhibitor locus Iw2 in wild diploid wheat Aegilops tauschii: phenotypic survey, genetic analysis, and implications for the evolution of common wheat. BMC Plant Biol (2014) 0.82
Intraspecific lineage divergence and its association with reproductive trait change during species range expansion in central Eurasian wild wheat Aegilops tauschii Coss. (Poaceae). BMC Evol Biol (2015) 0.81
Application of Population Sequencing (POPSEQ) for Ordering and Imputing Genotyping-by-Sequencing Markers in Hexaploid Wheat. G3 (Bethesda) (2015) 0.80
Genetic dissection of maize plant architecture with an ultra-high density bin map based on recombinant inbred lines. BMC Genomics (2016) 0.80
Genome-wide characterization of microsatellites in Triticeae species: abundance, distribution and evolution. Sci Rep (2016) 0.79
Salt tolerance during germination and seedling growth of wild wheat Aegilops tauschii and its impact on the species range expansion. Sci Rep (2016) 0.78
Complete chloroplast genomes of Aegilops tauschii Coss. and Ae. cylindrica Host sheds light on plasmon D evolution. Curr Genet (2016) 0.78
Application of next-generation sequencing technology to study genetic diversity and identify unique SNP markers in bread wheat from Kazakhstan. BMC Plant Biol (2014) 0.77
Genome-wide association for grain yield under rainfed conditions in historical wheat cultivars from Pakistan. Front Plant Sci (2015) 0.77
Genome-wide association study of 29 morphological traits in Aegilops tauschii. Sci Rep (2015) 0.77
The grain Hardness locus characterized in a diverse wheat panel (Triticum aestivum L.) adapted to the central part of the Fertile Crescent: genetic diversity, haplotype structure, and phylogeny. Mol Genet Genomics (2016) 0.76
Genome-wide association study of drought-related resistance traits in Aegilops tauschii. Genet Mol Biol (2016) 0.75
SNPing Aegilops tauschii genetic diversity and the birthplace of bread wheat. New Phytol (2013) 0.75
Identification and Analysis of RNA Editing Sites in the Chloroplast Transcripts of Aegilops tauschii L. Genes (Basel) (2016) 0.75
Genome-Wide Mapping of Growth-Related Quantitative Trait Loci in Orange-Spotted Grouper (Epinephelus coioides) Using Double Digest Restriction-Site Associated DNA Sequencing (ddRADseq). Int J Mol Sci (2016) 0.75
Genetic Architecture of Flowering Phenology in Cereals and Opportunities for Crop Improvement. Front Plant Sci (2016) 0.75
Genome-Wide Association Study of Grain Architecture in Wild Wheat Aegilops tauschii. Front Plant Sci (2017) 0.75
Genome-wide association study of pre-harvest sprouting resistance in Chinese wheat founder parents. Genet Mol Biol (2017) 0.75
Global analysis of gene expression in response to whole-chromosome aneuploidy in hexaploid wheat. Plant Physiol (2017) 0.75
Aegilops tauschii Accessions with Geographically Diverse Origin Show Differences in Chromosome Organization and Polymorphism of Molecular Markers Linked to Leaf Rust and Powdery Mildew Resistance Genes. Front Plant Sci (2017) 0.75
Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature (2012) 5.67
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus). Nature (2008) 5.54
BatchPrimer3: a high throughput web application for PCR and sequencing primer design. BMC Bioinformatics (2008) 5.24
Characterization of polyploid wheat genomic diversity using a high-density 90,000 single nucleotide polymorphism array. Plant Biotechnol J (2014) 4.02
Genome plasticity a key factor in the success of polyploid wheat under domestication. Science (2007) 3.69
Comparative DNA sequence analysis of wheat and rice genomes. Genome Res (2003) 3.63
Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nat Biotechnol (2013) 3.41
High-throughput fingerprinting of bacterial artificial chromosomes using the snapshot labeling kit and sizing of restriction fragments by capillary electrophoresis. Genomics (2003) 3.02
Draft genome of the wheat A-genome progenitor Triticum urartu. Nature (2013) 2.86
The organization and rate of evolution of wheat genomes are correlated with recombination rates along chromosome arms. Genome Res (2003) 2.62
Single nucleotide polymorphism genotyping in polyploid wheat with the Illumina GoldenGate assay. Theor Appl Genet (2009) 2.56
The nuclear genome of Brachypodium distachyon: analysis of BAC end sequences. Funct Integr Genomics (2007) 1.97
Synteny perturbations between wheat homoeologous chromosomes caused by locus duplications and deletions correlate with recombination rates. Proc Natl Acad Sci U S A (2003) 1.90
Annotation-based genome-wide SNP discovery in the large and complex Aegilops tauschii genome using next-generation sequencing without a reference genome sequence. BMC Genomics (2011) 1.88
Recombination: an underappreciated factor in the evolution of plant genomes. Nat Rev Genet (2007) 1.84
Molecular characterization of a diagnostic DNA marker for domesticated tetraploid wheat provides evidence for gene flow from wild tetraploid wheat to hexaploid wheat. Mol Biol Evol (2006) 1.78
Construction and characterization of two BAC libraries from Brachypodium distachyon, a new model for grass genomics. Genome (2006) 1.77
A 4-gigabase physical map unlocks the structure and evolution of the complex genome of Aegilops tauschii, the wheat D-genome progenitor. Proc Natl Acad Sci U S A (2013) 1.70
Population- and genome-specific patterns of linkage disequilibrium and SNP variation in spring and winter wheat (Triticum aestivum L.). BMC Genomics (2010) 1.62
The gene Sr33, an ortholog of barley Mla genes, encodes resistance to wheat stem rust race Ug99. Science (2013) 1.55
Microsatellite discovery from BAC end sequences and genetic mapping to anchor the soybean physical and genetic maps. Genome (2008) 1.53
Rapid genome mapping in nanochannel arrays for highly complete and accurate de novo sequence assembly of the complex Aegilops tauschii genome. PLoS One (2013) 1.44
Superheavy element flerovium (element 114) is a volatile metal. Inorg Chem (2014) 1.43
Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics (2010) 1.41
GenoProfiler: batch processing of high-throughput capillary fingerprinting data. Bioinformatics (2006) 1.32
Sequence polymorphism in polyploid wheat and their d-genome diploid ancestor. Genetics (2004) 1.30
A BAC-based physical map of Brachypodium distachyon and its comparative analysis with rice and wheat. BMC Genomics (2009) 1.30
ConservedPrimers 2.0: a high-throughput pipeline for comparative genome referenced intron-flanking PCR primer design and its application in wheat SNP discovery. BMC Bioinformatics (2009) 1.29
Deletion polymorphism in wheat chromosome regions with contrasting recombination rates. Genetics (2004) 1.28
Transcriptional profiling of wheat caryopsis development using cDNA microarrays. Plant Mol Biol (2007) 1.26
Dynamics of the evolution of orthologous and paralogous portions of a complex locus region in two genomes of allopolyploid wheat. Plant Mol Biol (2004) 1.23
A first generation integrated map of the rainbow trout genome. BMC Genomics (2011) 1.23
Structural characterization of Brachypodium genome and its syntenic relationship with rice and wheat. Plant Mol Biol (2009) 1.22
Comparison of a high-density genetic linkage map to genome features in the model grass Brachypodium distachyon. Theor Appl Genet (2011) 1.20
A first generation BAC-based physical map of the rainbow trout genome. BMC Genomics (2009) 1.20
Mechanisms and rates of birth and death of dispersed duplicated genes during the evolution of a multigene family in diploid and tetraploid wheats. Mol Biol Evol (2006) 1.19
Transferability of microsatellite markers from Brachypodium distachyon to Miscanthus sinensis, a potential biomass crop. J Integr Plant Biol (2011) 1.16
PIECE: a database for plant gene structure comparison and evolution. Nucleic Acids Res (2012) 1.10
Synthetic hexaploid wheat and its utilization for wheat genetic improvement in China. J Genet Genomics (2009) 1.10
A high-throughput strategy for screening of bacterial artificial chromosome libraries and anchoring of clones on a genetic map constructed with single nucleotide polymorphisms. BMC Genomics (2009) 1.08
A physical map of the papaya genome with integrated genetic map and genome sequence. BMC Genomics (2009) 1.08
Efficacy of clone fingerprinting methodologies. Genomics (2006) 1.08
A second generation integrated map of the rainbow trout (Oncorhynchus mykiss) genome: analysis of conserved synteny with model fish genomes. Mar Biotechnol (NY) (2011) 1.06
Rapid development of PCR-based genome-specific repetitive DNA junction markers in wheat. Genome (2009) 1.01
Genomic organization of the complex alpha-gliadin gene loci in wheat. Theor Appl Genet (2004) 1.01
Genetic diversity revealed by single nucleotide polymorphism markers in a worldwide germplasm collection of durum wheat. Int J Mol Sci (2013) 1.00
BAC libraries from wheat chromosome 7D: efficient tool for positional cloning of aphid resistance genes. J Biomed Biotechnol (2010) 1.00
Sequence-based analysis of translocations and inversions in bread wheat (Triticum aestivum L.). PLoS One (2013) 1.00
Feasibility of physical map construction from fingerprinted bacterial artificial chromosome libraries of polyploid plant species. BMC Genomics (2010) 0.97
Introgression of chromosome 3Ns from Psathyrostachys huashanica into wheat specifying resistance to stripe rust. PLoS One (2011) 0.97
Leveraging genomic resources of model species for the assessment of diversity and phylogeny in wild and domesticated lentil. J Hered (2011) 0.96
RJPrimers: unique transposable element insertion junction discovery and PCR primer design for marker development. Nucleic Acids Res (2010) 0.95
Comparative analysis of the D genome-encoded high-molecular weight subunits of glutenin. Theor Appl Genet (2005) 0.93
Genome wide SNP discovery in flax through next generation sequencing of reduced representation libraries. BMC Genomics (2012) 0.93
Integrated physical, genetic and genome map of chickpea (Cicer arietinum L.). Funct Integr Genomics (2014) 0.92
Fine mapping of the Bsr1 barley stripe mosaic virus resistance gene in the model grass Brachypodium distachyon. PLoS One (2012) 0.92
Identification of candidate genes, regions and markers for pre-harvest sprouting resistance in wheat (Triticum aestivum L.). BMC Plant Biol (2014) 0.91
Rapid changes of microsatellite flanking sequence in the allopolyploidization of new synthesized hexaploid wheat. Sci China C Life Sci (2004) 0.90
Mitotic illegitimate recombination is a mechanism for novel changes in high-molecular-weight glutenin subunits in wheat-rye hybrids. PLoS One (2011) 0.90
Combinatorial pooling enables selective sequencing of the barley gene space. PLoS Comput Biol (2013) 0.88
A new implementation of high-throughput five-dimensional clone pooling strategy for BAC library screening. BMC Genomics (2010) 0.88
Recent emergence of the wheat Lr34 multi-pathogen resistance: insights from haplotype analysis in wheat, rice, sorghum and Aegilops tauschii. Theor Appl Genet (2012) 0.88
Comparative genetic maps reveal extreme crossover localization in the Aegilops speltoides chromosomes. Theor Appl Genet (2005) 0.87
A novel and major quantitative trait locus for fusarium crown rot resistance in a genotype of Wild Barley (Hordeum spontaneum L.). PLoS One (2013) 0.87
Fine mapping and epistatic interactions of the vernalization gene VRN-D4 in hexaploid wheat. Mol Genet Genomics (2013) 0.86
The origin of spelt and free-threshing hexaploid wheat. J Hered (2012) 0.86
Insular organization of gene space in grass genomes. PLoS One (2013) 0.85